Miyakogusa Predicted Gene
- Lj0g3v0327759.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0327759.1 Non Chatacterized Hit- tr|K3YT65|K3YT65_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si017463,25.81,8e-19,TARGET OF MYB1 RELATED (TOM1 - RELATED),
PLANT,NULL; VHS DOMAIN CONTAINING PROTEIN FAMILY,NULL;
ENTH,gene.g25583.t1.1
(304 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g34790.1 250 1e-66
Glyma03g32040.1 231 6e-61
Glyma01g44290.1 114 1e-25
Glyma12g02000.1 87 2e-17
Glyma11g01220.1 69 6e-12
Glyma11g01220.4 69 8e-12
Glyma11g01220.3 69 8e-12
Glyma11g01220.2 69 8e-12
Glyma07g17530.1 50 4e-06
Glyma13g09390.1 49 8e-06
>Glyma19g34790.1
Length = 397
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 188/300 (62%), Gaps = 28/300 (9%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
MIN+ Q NG+EV+ A+KRKINH+SP+VQ L+LD+LE A+ C+ VFS++ SE VL++M
Sbjct: 64 MINSDQFNGSEVVKAIKRKINHKSPVVQALSLDLLEACAMNCDKVFSEIASEKVLDEMIR 123
Query: 61 FIYNPHADKHNQKKALQLIESWANLGYPDYLGLLRESQSSMVIDQKKESYMSLIGRDEQA 120
I NP A + +A QLI +W YL + R++ YM L GRDE
Sbjct: 124 LIDNPQAQHQTRSRAFQLIRAWGESEDLAYLPVFRQT------------YMCLKGRDEPL 171
Query: 121 VTAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPEEAELED--STAAYSPPKYLPMSN 178
A S P +S Y H+ P+DPPE IPE AEL D AA+S Y S
Sbjct: 172 DMAGGNSPPVPYASES----YAHQYPVDPPERYPIPE-AELHDIDDPAAFSS-NYQHTSV 225
Query: 179 EEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTTNDE 238
EE+K +LV A++ EL SSI+ SE EP PLKEDLT+SLLD CK SL+ +K I E TTNDE
Sbjct: 226 EERKENLVVARNSLELLSSILNSEAEPKPLKEDLTMSLLDKCKQSLSIIKGIAESTTNDE 285
Query: 239 VTNIEALYLNDELEQLVSQFDDLEVAQMYGAQQPQNADS--------ANLNELPERFEGD 290
T EALYLNDEL+Q+VS++++LE AQ YGAQQPQNAD+ N NE+P+ E +
Sbjct: 286 ATLFEALYLNDELQQVVSKYEELEAAQSYGAQQPQNADTDKHDAEAVQNPNEVPKSDESE 345
>Glyma03g32040.1
Length = 401
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 186/300 (62%), Gaps = 33/300 (11%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
MIN+ Q NG+EV+ A+KRKINH+SP+VQ L+LD+LE A+ C+ VFS++ SE VL+++
Sbjct: 64 MINSDQFNGSEVVKAIKRKINHKSPVVQTLSLDLLEACAMNCDKVFSEIASEKVLDEIIR 123
Query: 61 FIYNPHADKHNQKKALQLIESWANLGYPDYLGLLRESQSSMVIDQKKESYMSLIGRDEQA 120
I NP A + +A QLI +W YL + R++ YMSL GRDE
Sbjct: 124 LIDNPQAHHQTRSRAFQLIRAWGESEDLAYLPVFRQT------------YMSLKGRDE-P 170
Query: 121 VTAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPEEAELED--STAAYSPPKYLPMSN 178
V A ++P Y + +D PE IP+ AEL D AA+S Y +S
Sbjct: 171 VDMAGGNSPHVPYASESY--------VDAPERYPIPQ-AELHDIDDPAAFSS-NYQHISV 220
Query: 179 EEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTTNDE 238
EE+K HLV A++ EL SSI+ S+ EP LKEDLT+SLLD CK SL+ +K I+E TTNDE
Sbjct: 221 EERKEHLVVARNSLELLSSILNSDAEPKTLKEDLTVSLLDKCKQSLSIIKGIVESTTNDE 280
Query: 239 VTNIEALYLNDELEQLVSQFDDLEVAQMYGAQQPQNADS--------ANLNELPERFEGD 290
T EALYLNDEL+Q+VS++++L+ AQ GAQQPQNAD+ N NE+PE E +
Sbjct: 281 ATLFEALYLNDELQQIVSKYEELDAAQSSGAQQPQNADTDKHDAKAVQNPNEVPENEESE 340
>Glyma01g44290.1
Length = 405
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 142/266 (53%), Gaps = 26/266 (9%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
++NT +LN E++ +K++I +SP VQ LAL +LET C FS+V +E VL++M
Sbjct: 75 LVNTDKLNCVELVRGIKKRIILKSPRVQYLALVLLETLVKNCEKAFSEVAAERVLDEMVK 134
Query: 61 FIYNPHADKHNQKKALQLIESWA-NLGYPDYLGLLRESQSSMVIDQKKESYMSLIGRDEQ 119
I +P +N+ KAL +IE+W + G YL + E+ S+ + + GRD +
Sbjct: 135 LIDDPQTVVNNRNKALMMIEAWGESTGELRYLPVYEETYKSL-----RSRGIRFPGRDNE 189
Query: 120 A---VTAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPEEAELEDSTAAYSPPKYLPM 176
+ + +S +A D L + D IPE+ + +++P
Sbjct: 190 SLAPIFTPPRSVSSAPEADVNLQQQFEHD---------IPEQFHHDVPVLSFTP------ 234
Query: 177 SNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTTN 236
E+ K L A++ EL S+++ S + L++DLT +L+ C+ S ++RI+E +
Sbjct: 235 --EQTKEALDVARNSIELLSTVLSSSPQQDALQDDLTTTLVQQCRRSQTTVQRIVETAGD 292
Query: 237 DEVTNIEALYLNDELEQLVSQFDDLE 262
+E EAL +NDE++++++++++L+
Sbjct: 293 NEAVLFEALNVNDEIQKVLTKYEELK 318
>Glyma12g02000.1
Length = 400
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 136/278 (48%), Gaps = 40/278 (14%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
+IN QLN E++ A+K+++ +SP Q LAL +LE C+ F +V +E VL++M
Sbjct: 74 LINADQLNTAELVRAIKKRVVAKSPRGQYLALVLLEALVKNCDKAFLEVATERVLDEMVK 133
Query: 61 FIYNPHADKHNQKKALQLIESWANLGYP-DYLGLLRESQSSMVIDQKKESYMSLIGRDEQ 119
I +P +N+ KAL +IE+W YL + E+ S+ K + GRD +
Sbjct: 134 LIDDPQTILNNRNKALIMIEAWGESTIELRYLPVYAETYKSL-----KSRGIRFPGRDNE 188
Query: 120 AVTAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPE-EAELED---------STAAYS 169
++ AP PP PE + D S + +
Sbjct: 189 SL------API----------------FTPPHSAITPEADVSFADLIQYDIHGQSLTSVT 226
Query: 170 PPKYLPMS--NEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAM 227
PP S +E+ K A++ EL S+++ S + LK++LT +L+ C+ S ++
Sbjct: 227 PPHIHMQSFKSEQIKETFDVARNSIELLSTVLSSTMQQNVLKDELTTTLVQQCRQSQTSV 286
Query: 228 KRILERTTNDEVTNIEALYLNDELEQLVSQFDDLEVAQ 265
RI+E ++E +EAL +NDE++++ S++++L+ Q
Sbjct: 287 HRIVETAWDNEAVLVEALNVNDEIQKVFSKYEELKKEQ 324
>Glyma11g01220.1
Length = 153
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
+IN +L+ E++ +K++I +SP VQ LAL +LET C FS+V +E VL++M
Sbjct: 45 LINADKLSSVELVRGIKKRIVLKSPRVQYLALVLLETLVKNCEKAFSEVAAERVLDEMVR 104
Query: 61 FIYNPHADKHNQKKALQLIESWA-NLGYPDYLGLLRES 97
I +P +N+ KAL +IE+WA + G YL + E+
Sbjct: 105 LIDDPQTVVNNRNKALMMIEAWAESTGELRYLPVYEET 142
>Glyma11g01220.4
Length = 145
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
+IN +L+ E++ +K++I +SP VQ LAL +LET C FS+V +E VL++M
Sbjct: 45 LINADKLSSVELVRGIKKRIVLKSPRVQYLALVLLETLVKNCEKAFSEVAAERVLDEMVR 104
Query: 61 FIYNPHADKHNQKKALQLIESWA-NLGYPDYLGLLRES 97
I +P +N+ KAL +IE+WA + G YL + E+
Sbjct: 105 LIDDPQTVVNNRNKALMMIEAWAESTGELRYLPVYEET 142
>Glyma11g01220.3
Length = 145
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
+IN +L+ E++ +K++I +SP VQ LAL +LET C FS+V +E VL++M
Sbjct: 45 LINADKLSSVELVRGIKKRIVLKSPRVQYLALVLLETLVKNCEKAFSEVAAERVLDEMVR 104
Query: 61 FIYNPHADKHNQKKALQLIESWA-NLGYPDYLGLLRES 97
I +P +N+ KAL +IE+WA + G YL + E+
Sbjct: 105 LIDDPQTVVNNRNKALMMIEAWAESTGELRYLPVYEET 142
>Glyma11g01220.2
Length = 145
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
+IN +L+ E++ +K++I +SP VQ LAL +LET C FS+V +E VL++M
Sbjct: 45 LINADKLSSVELVRGIKKRIVLKSPRVQYLALVLLETLVKNCEKAFSEVAAERVLDEMVR 104
Query: 61 FIYNPHADKHNQKKALQLIESWA-NLGYPDYLGLLRES 97
I +P +N+ KAL +IE+WA + G YL + E+
Sbjct: 105 LIDDPQTVVNNRNKALMMIEAWAESTGELRYLPVYEET 142
>Glyma07g17530.1
Length = 86
Score = 49.7 bits (117), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 7 LNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTWFIYNPH 66
L+ +++ +K++I +SP VQ LAL +LET C FSKV +E VL +M
Sbjct: 1 LSSIKLIRGIKKRIILKSPRVQYLALVLLETLVKNCEKAFSKVTAERVLNEM-------- 52
Query: 67 ADKHNQKKALQLIESWA 83
A +N+ KAL +IE+W
Sbjct: 53 AVVNNRNKALMMIEAWG 69
>Glyma13g09390.1
Length = 508
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 117/272 (43%), Gaps = 50/272 (18%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYC-NMVFSKVVSEMVLEDMT 59
+IN + + +K++++ ++P +Q LAL LET + C + VF +++ + +L +M
Sbjct: 31 IINMDPRQAKDAIKILKKRLSSKNPQIQLLALFALETLSKNCGDSVFQQIIEQDILHEMV 90
Query: 60 WFIYNPHADKHNQKKALQLIESW------ANLGYPDYLGLLRESQSSMVIDQKKESYMSL 113
+ P D ++K L LI++W + YP YL E +S+ V +E +
Sbjct: 91 KIVKKP--DLRVREKILILIDTWQEAFGGPSGKYPQYLAAYNELKSAGVEFPPREENSAP 148
Query: 114 IGRDEQAVTAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPEEAELEDSTAAYSPPKY 173
Q + AA Y D+++ H D G ++PE
Sbjct: 149 FFTPPQTLPVHLA---AAEYDDASIQASLHSD----ASGLSLPE---------------- 185
Query: 174 LPMSNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKED--LTLSLLDDCKLSLAAMKRI- 230
+ AQ ++ + +V + P E+ + L+D C+ + KR+
Sbjct: 186 -----------IQNAQGLADVLTEMVNALDPKNPEVENQEVIAELVDQCR---SYQKRVM 231
Query: 231 -LERTTNDEVTNIEALYLNDELEQLVSQFDDL 261
L T+DE + L LND L++++ Q D++
Sbjct: 232 LLVNETSDEQLLGQGLALNDSLQRVLCQHDNI 263