Miyakogusa Predicted Gene

Lj0g3v0327169.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327169.1 tr|A9U113|A9U113_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173097,48.96,0.000000000000002,seg,NULL,CUFF.22257.1
         (187 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g06260.1                                                       285   2e-77
Glyma02g12290.1                                                       283   6e-77
Glyma01g06260.2                                                       196   9e-51

>Glyma01g06260.1 
          Length = 186

 Score =  285 bits (728), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 143/189 (75%), Positives = 159/189 (84%), Gaps = 5/189 (2%)

Query: 1   MSFMKGDLLSRTRKLVKGLAKAEPVWLKAMEQAPPATFPRAGEKVQTITLPEDVYVKKFY 60
           MSFM+GD LSRTRKLVKGLAKA+P WLKAME  PPATFPR+  K+ TITLPEDVYVKKFY
Sbjct: 1   MSFMRGDFLSRTRKLVKGLAKAQPAWLKAMEHGPPATFPRSAGKIPTITLPEDVYVKKFY 60

Query: 61  KKYPESKYHDPIRFCAFDPPPSRIFALRVLELKKHGIGEEQAMAVADTEYRAEKKAKKQA 120
           KKYPESKYHD I+F AFDPPPSR+FALRVLELK+ G+ EEQAMA+AD EY  EKKAKK+A
Sbjct: 61  KKYPESKYHDAIKFHAFDPPPSRVFALRVLELKEQGVSEEQAMAIADMEYVTEKKAKKKA 120

Query: 121 YSRLKQIARLQGKRXXXXXXXXXIKEIQAEERKYVRDRFFNPKILEVVKQKKAE--AESF 178
           Y+RLK+IARLQGKR         IKEIQAEERKYVRDRFFNPKILE+V+++KAE  AE  
Sbjct: 121 YTRLKEIARLQGKRLPQNPYPSAIKEIQAEERKYVRDRFFNPKILEIVEKQKAEAAAERL 180

Query: 179 SSGFRGGDW 187
           S   RGGDW
Sbjct: 181 S---RGGDW 186


>Glyma02g12290.1 
          Length = 186

 Score =  283 bits (725), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 143/189 (75%), Positives = 159/189 (84%), Gaps = 5/189 (2%)

Query: 1   MSFMKGDLLSRTRKLVKGLAKAEPVWLKAMEQAPPATFPRAGEKVQTITLPEDVYVKKFY 60
           MSFM+GD LSRTRKLVKGLAKA+P WLKAMEQAPPATFPR+  K+ TITLPEDVYVKKFY
Sbjct: 1   MSFMRGDFLSRTRKLVKGLAKAQPAWLKAMEQAPPATFPRSAGKIPTITLPEDVYVKKFY 60

Query: 61  KKYPESKYHDPIRFCAFDPPPSRIFALRVLELKKHGIGEEQAMAVADTEYRAEKKAKKQA 120
           KKYPESK HD I+F AFDPPPSR+FALRVLELK+ GI EEQAMA+AD EY  EKK KK+A
Sbjct: 61  KKYPESKSHDAIKFHAFDPPPSRVFALRVLELKEQGISEEQAMAIADMEYLTEKKTKKKA 120

Query: 121 YSRLKQIARLQGKRXXXXXXXXXIKEIQAEERKYVRDRFFNPKILEVVKQKKAE--AESF 178
           Y+RLK+IARLQGKR         IKEIQAEERKYVRDRFFNPK+LE+V+++KAE  AE  
Sbjct: 121 YTRLKEIARLQGKRLPQNPYPSAIKEIQAEERKYVRDRFFNPKMLEIVEKQKAEAAAERL 180

Query: 179 SSGFRGGDW 187
           S   RGGDW
Sbjct: 181 S---RGGDW 186


>Glyma01g06260.2 
          Length = 145

 Score =  196 bits (499), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 111/189 (58%), Positives = 124/189 (65%), Gaps = 46/189 (24%)

Query: 1   MSFMKGDLLSRTRKLVKGLAKAEPVWLKAMEQAPPATFPRAGEKVQTITLPEDVYVKKFY 60
           MSFM+GD LSRTRKLVKGLAKA+P WLKAMEQ                            
Sbjct: 1   MSFMRGDFLSRTRKLVKGLAKAQPAWLKAMEQ---------------------------- 32

Query: 61  KKYPESKYHDPIRFCAFDPPPSRIFALRVLELKKHGIGEEQAMAVADTEYRAEKKAKKQA 120
                        F AFDPPPSR+FALRVLELK+ G+ EEQAMA+AD EY  EKKAKK+A
Sbjct: 33  -------------FHAFDPPPSRVFALRVLELKEQGVSEEQAMAIADMEYVTEKKAKKKA 79

Query: 121 YSRLKQIARLQGKRXXXXXXXXXIKEIQAEERKYVRDRFFNPKILEVVKQKKAE--AESF 178
           Y+RLK+IARLQGKR         IKEIQAEERKYVRDRFFNPKILE+V+++KAE  AE  
Sbjct: 80  YTRLKEIARLQGKRLPQNPYPSAIKEIQAEERKYVRDRFFNPKILEIVEKQKAEAAAERL 139

Query: 179 SSGFRGGDW 187
           S   RGGDW
Sbjct: 140 S---RGGDW 145