Miyakogusa Predicted Gene

Lj0g3v0327159.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327159.2 Non Chatacterized Hit- tr|A2XSL3|A2XSL3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,32.09,0.000000000000004,seg,NULL,CUFF.22256.2
         (233 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g36540.1                                                       261   5e-70
Glyma11g36540.2                                                       259   2e-69
Glyma18g00450.1                                                       210   1e-54

>Glyma11g36540.1 
          Length = 389

 Score =  261 bits (667), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 130/187 (69%), Positives = 148/187 (79%), Gaps = 1/187 (0%)

Query: 47  DYASKDQKTSEATEGFDSPMLADDCLNLTIVNIDKNLEQFVLDNKIEEMNLNIKSLEDLQ 106
           DY    +      EG DSPMLADDCLNLT+ N+DKNLEQF LDNKI+EM   + SL++LQ
Sbjct: 102 DYNVTSKYQKNTAEGIDSPMLADDCLNLTVANLDKNLEQFELDNKIDEMKSVLNSLQNLQ 161

Query: 107 CKVKWFDAVQQIEDELVGLKVLEFDENCIKLSLRTYMPTVGGSSYTERVEDSIDVRELNH 166
             VKWF+ V+QIED   GLKVL FDENCI+LSL+TYMPT  G SY  R+E ++D  ELN+
Sbjct: 162 FTVKWFEVVEQIEDAFTGLKVLAFDENCIRLSLKTYMPTFEGISYLPRIEATVDAAELNY 221

Query: 167 ELLIEV-EGNMKLKNVQVFPNDIHVNDIVDAAKSVSKFSLQWFIQKVQDRIILNKLRHLA 225
           ELLIEV EG M+LKNVQVFPNDI+VNDIVD AK VSK SLQWFIQKVQDRIIL+ LRHL 
Sbjct: 222 ELLIEVFEGTMRLKNVQVFPNDIYVNDIVDTAKLVSKSSLQWFIQKVQDRIILSTLRHLV 281

Query: 226 VKDANKS 232
           VKDANKS
Sbjct: 282 VKDANKS 288


>Glyma11g36540.2 
          Length = 386

 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/180 (72%), Positives = 149/180 (82%), Gaps = 2/180 (1%)

Query: 55  TSEAT-EGFDSPMLADDCLNLTIVNIDKNLEQFVLDNKIEEMNLNIKSLEDLQCKVKWFD 113
           TS+ T EG DSPMLADDCLNLT+ N+DKNLEQF LDNKI+EM   + SL++LQ  VKWF+
Sbjct: 106 TSKNTAEGIDSPMLADDCLNLTVANLDKNLEQFELDNKIDEMKSVLNSLQNLQFTVKWFE 165

Query: 114 AVQQIEDELVGLKVLEFDENCIKLSLRTYMPTVGGSSYTERVEDSIDVRELNHELLIEV- 172
            V+QIED   GLKVL FDENCI+LSL+TYMPT  G SY  R+E ++D  ELN+ELLIEV 
Sbjct: 166 VVEQIEDAFTGLKVLAFDENCIRLSLKTYMPTFEGISYLPRIEATVDAAELNYELLIEVF 225

Query: 173 EGNMKLKNVQVFPNDIHVNDIVDAAKSVSKFSLQWFIQKVQDRIILNKLRHLAVKDANKS 232
           EG M+LKNVQVFPNDI+VNDIVD AK VSK SLQWFIQKVQDRIIL+ LRHL VKDANKS
Sbjct: 226 EGTMRLKNVQVFPNDIYVNDIVDTAKLVSKSSLQWFIQKVQDRIILSTLRHLVVKDANKS 285


>Glyma18g00450.1 
          Length = 209

 Score =  210 bits (535), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 107/150 (71%), Positives = 122/150 (81%), Gaps = 1/150 (0%)

Query: 84  EQFVLDNKIEEMNLNIKSLEDLQCKVKWFDAVQQIEDELVGLKVLEFDENCIKLSLRTYM 143
           +QF LDNKI+EM L +KSL++LQ  VKWF+ V+QIE   + LKVL F ENCI+LSL+TYM
Sbjct: 1   QQFELDNKIDEMKLVLKSLQNLQFTVKWFEVVEQIEYAFMELKVLAFGENCIRLSLQTYM 60

Query: 144 PTVGGSSYTERVEDSIDVRELNHELLIEV-EGNMKLKNVQVFPNDIHVNDIVDAAKSVSK 202
           PT  G SY  RVE ++D  ELNHELLIEV EG M+ KNVQVFPNDI+VNDIVD AK VSK
Sbjct: 61  PTFVGISYLPRVEATVDTAELNHELLIEVFEGTMRSKNVQVFPNDIYVNDIVDTAKFVSK 120

Query: 203 FSLQWFIQKVQDRIILNKLRHLAVKDANKS 232
            SLQWFIQKVQDRIIL+ LRHL VKDANKS
Sbjct: 121 SSLQWFIQKVQDRIILSTLRHLVVKDANKS 150