Miyakogusa Predicted Gene
- Lj0g3v0326889.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0326889.1 tr|B9NKJ8|B9NKJ8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_591069 PE=4 SV=1,60.53,0.00006,
,CUFF.22237.1
(144 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g37230.1 248 2e-66
Glyma12g24910.1 246 4e-66
Glyma13g35220.1 232 8e-62
Glyma12g35290.1 232 8e-62
Glyma15g08080.1 214 2e-56
Glyma13g31270.2 206 5e-54
Glyma13g31270.3 201 2e-52
Glyma13g31270.4 199 7e-52
Glyma13g31270.1 199 8e-52
Glyma17g19470.1 194 2e-50
Glyma06g20050.1 176 8e-45
Glyma18g12470.1 174 4e-44
Glyma06g40540.1 159 1e-39
Glyma01g24490.1 110 6e-25
Glyma04g32370.1 110 6e-25
Glyma08g38910.1 56 1e-08
>Glyma06g37230.1
Length = 144
Score = 248 bits (632), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 132/144 (91%)
Query: 1 MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
MVSSVFTL+C LHS IAL+CGA+MIFYSKEI+V G G ETASKLQG+T HDQLLI TSDS
Sbjct: 1 MVSSVFTLMCVLHSTIALTCGALMIFYSKEISVLGHGSETASKLQGTTPHDQLLIDTSDS 60
Query: 61 FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
FSGLLLF IG LL+MV+ VKDR+FQSFFAKGCV+LH+SMAVWRFFFERK+ DLA +WPRH
Sbjct: 61 FSGLLLFTIGFLLLMVAFVKDREFQSFFAKGCVMLHISMAVWRFFFERKLGDLAHEWPRH 120
Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
AVG+IALA+SWVFFLV++WREKYD
Sbjct: 121 AVGDIALAISWVFFLVYTWREKYD 144
>Glyma12g24910.1
Length = 144
Score = 246 bits (629), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 116/144 (80%), Positives = 131/144 (90%)
Query: 1 MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
MVSSV+TL+C LHS IAL+CGA+MIFYSKEI+V G G ETASKLQG+T HDQLLI TSDS
Sbjct: 1 MVSSVYTLMCVLHSTIALTCGALMIFYSKEISVLGHGSETASKLQGTTPHDQLLIDTSDS 60
Query: 61 FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
FSGLLLF IG LL+MV+ VKDRDFQSFFAKGCV+LH+SMAVWRFFFERK+ DLA +WPRH
Sbjct: 61 FSGLLLFTIGFLLLMVAFVKDRDFQSFFAKGCVMLHISMAVWRFFFERKLGDLAHEWPRH 120
Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
AVG+IALA SWVFFLV++WREKYD
Sbjct: 121 AVGDIALAFSWVFFLVYTWREKYD 144
>Glyma13g35220.1
Length = 145
Score = 232 bits (592), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 127/142 (89%)
Query: 3 SSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDSFS 62
SS F +IC LHSAIAL+CG++M+FYSKE++V G GP+TASKLQGST HDQLLI+TSDSFS
Sbjct: 4 SSCFFIICVLHSAIALTCGSLMVFYSKELSVLGHGPKTASKLQGSTPHDQLLIQTSDSFS 63
Query: 63 GLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRHAV 122
GLLLF IG L+ MV+ VKD +FQSFFAKGCVLLH+SMAVWRF+FE K+EDLA DWPRHAV
Sbjct: 64 GLLLFTIGFLVFMVACVKDWEFQSFFAKGCVLLHISMAVWRFYFEGKLEDLAHDWPRHAV 123
Query: 123 GNIALAVSWVFFLVFSWREKYD 144
G+IALA SW+FFLV+ WREKYD
Sbjct: 124 GDIALATSWLFFLVYMWREKYD 145
>Glyma12g35290.1
Length = 145
Score = 232 bits (592), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 126/142 (88%)
Query: 3 SSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDSFS 62
SS F +IC LHSAIAL+CG++M+FYSKEI V G GP+TASKLQGST HDQLLI+TSDSFS
Sbjct: 4 SSCFFIICVLHSAIALTCGSLMVFYSKEIRVLGHGPKTASKLQGSTPHDQLLIQTSDSFS 63
Query: 63 GLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRHAV 122
GLLLF IG L+ MV+ VKD +FQSFFAKGCVLLH+SMAVWRF+FE K+EDLA DWPRHAV
Sbjct: 64 GLLLFTIGFLVFMVACVKDWEFQSFFAKGCVLLHISMAVWRFYFEGKLEDLAHDWPRHAV 123
Query: 123 GNIALAVSWVFFLVFSWREKYD 144
G+IALA SW+FFLV+ WREKYD
Sbjct: 124 GDIALATSWLFFLVYMWREKYD 145
>Glyma15g08080.1
Length = 148
Score = 214 bits (546), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 117/144 (81%)
Query: 1 MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
M SS F +IC LHS IA++CGA+M+FY KE+ FG G + A+KL GST HDQLLIKTSDS
Sbjct: 5 MASSAFMVICILHSVIAMTCGALMMFYMKEVYTFGHGVQAATKLLGSTPHDQLLIKTSDS 64
Query: 61 FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
FSGLLL AIG LL MVS VKDRDFQ FFAKGC LLH+ MA+WR +FERK+EDLA DW R
Sbjct: 65 FSGLLLVAIGFLLFMVSFVKDRDFQVFFAKGCTLLHLFMAMWRVYFERKVEDLALDWLRQ 124
Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
VG+ LA+SWVFFLV+SWREKYD
Sbjct: 125 TVGDFLLALSWVFFLVYSWREKYD 148
>Glyma13g31270.2
Length = 150
Score = 206 bits (525), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 98/139 (70%), Positives = 113/139 (81%)
Query: 6 FTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDSFSGLL 65
F +IC LHS IA++CG +M+FY KE+ FG G + A+KL GST HDQLLIKTSDSFSGLL
Sbjct: 12 FLVICILHSLIAVTCGGLMMFYMKEVYTFGHGVQAATKLLGSTPHDQLLIKTSDSFSGLL 71
Query: 66 LFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRHAVGNI 125
L AIG LL MVS VKDRDFQ FFAKGC LLH+ MA+WR +FERK+EDLA DW R VG+
Sbjct: 72 LVAIGFLLFMVSFVKDRDFQVFFAKGCTLLHLFMAMWRVYFERKVEDLAWDWLRQTVGDF 131
Query: 126 ALAVSWVFFLVFSWREKYD 144
LA+SWVFFLV+SWREKYD
Sbjct: 132 LLALSWVFFLVYSWREKYD 150
>Glyma13g31270.3
Length = 151
Score = 201 bits (511), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 111/137 (81%)
Query: 6 FTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDSFSGLL 65
F +IC LHS IA++CG +M+FY KE+ FG G + A+KL GST HDQLLIKTSDSFSGLL
Sbjct: 12 FLVICILHSLIAVTCGGLMMFYMKEVYTFGHGVQAATKLLGSTPHDQLLIKTSDSFSGLL 71
Query: 66 LFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRHAVGNI 125
L AIG LL MVS VKDRDFQ FFAKGC LLH+ MA+WR +FERK+EDLA DW R VG+
Sbjct: 72 LVAIGFLLFMVSFVKDRDFQVFFAKGCTLLHLFMAMWRVYFERKVEDLAWDWLRQTVGDF 131
Query: 126 ALAVSWVFFLVFSWREK 142
LA+SWVFFLV+SWREK
Sbjct: 132 LLALSWVFFLVYSWREK 148
>Glyma13g31270.4
Length = 148
Score = 199 bits (507), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 110/137 (80%)
Query: 6 FTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDSFSGLL 65
F +IC LHS IA++CG +M+FY KE+ FG G + A+KL GST HDQLLIKTSDSFSGLL
Sbjct: 12 FLVICILHSLIAVTCGGLMMFYMKEVYTFGHGVQAATKLLGSTPHDQLLIKTSDSFSGLL 71
Query: 66 LFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRHAVGNI 125
L AIG LL MVS VKDRDFQ FFAKGC LLH+ MA+WR +FERK+EDLA DW R VG+
Sbjct: 72 LVAIGFLLFMVSFVKDRDFQVFFAKGCTLLHLFMAMWRVYFERKVEDLAWDWLRQTVGDF 131
Query: 126 ALAVSWVFFLVFSWREK 142
LA+SWVFFLV+SWRE
Sbjct: 132 LLALSWVFFLVYSWREN 148
>Glyma13g31270.1
Length = 210
Score = 199 bits (506), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 95/138 (68%), Positives = 111/138 (80%)
Query: 6 FTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDSFSGLL 65
F +IC LHS IA++CG +M+FY KE+ FG G + A+KL GST HDQLLIKTSDSFSGLL
Sbjct: 12 FLVICILHSLIAVTCGGLMMFYMKEVYTFGHGVQAATKLLGSTPHDQLLIKTSDSFSGLL 71
Query: 66 LFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRHAVGNI 125
L AIG LL MVS VKDRDFQ FFAKGC LLH+ MA+WR +FERK+EDLA DW R VG+
Sbjct: 72 LVAIGFLLFMVSFVKDRDFQVFFAKGCTLLHLFMAMWRVYFERKVEDLAWDWLRQTVGDF 131
Query: 126 ALAVSWVFFLVFSWREKY 143
LA+SWVFFLV+SWRE +
Sbjct: 132 LLALSWVFFLVYSWRENW 149
>Glyma17g19470.1
Length = 133
Score = 194 bits (494), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 114/144 (79%), Gaps = 11/144 (7%)
Query: 1 MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
MVSS++T +C LHS IAL+CGA+MIFYSKEI+V G ETASKLQG+T +DQLLI TSDS
Sbjct: 1 MVSSIYTFMCVLHSIIALTCGALMIFYSKEISVLGHRSETASKLQGTTPYDQLLIDTSDS 60
Query: 61 FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
FSGLLLF IG LL+M F +LH+S+AVWRFFFERK+ DLA +WPRH
Sbjct: 61 FSGLLLFTIGFLLLM-----------FLCLRVWMLHISIAVWRFFFERKLGDLAHEWPRH 109
Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
AVG+IALA+SWVFFLV++WREKYD
Sbjct: 110 AVGDIALAISWVFFLVYTWREKYD 133
>Glyma06g20050.1
Length = 129
Score = 176 bits (446), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 113/144 (78%), Gaps = 15/144 (10%)
Query: 1 MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
MVSS++TL+C LHS IAL+CGA+MIFYSKEI V G ETASKLQG+T +DQLLI TSDS
Sbjct: 1 MVSSIYTLMCVLHSTIALTCGALMIFYSKEIFVLGHRSETASKLQGTTPYDQLLIDTSDS 60
Query: 61 FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
FSGLLLF IG LL+MV+ VKD DFQ +WRFFFERK+ DLA +WPRH
Sbjct: 61 FSGLLLFIIGFLLLMVAFVKDIDFQ---------------MWRFFFERKLGDLAHEWPRH 105
Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
VG+IALA+SWVFFLV++WREKYD
Sbjct: 106 VVGDIALAISWVFFLVYTWREKYD 129
>Glyma18g12470.1
Length = 115
Score = 174 bits (440), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 101/130 (77%), Gaps = 15/130 (11%)
Query: 1 MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
MVSS++TL+C LHS IAL+CGA+MIFYSKEI+V G ETASKLQG+T HDQLLI TSDS
Sbjct: 1 MVSSIYTLMCVLHSTIALTCGALMIFYSKEISVLGHRSETASKLQGTTPHDQLLIDTSDS 60
Query: 61 FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
FSGLLLF IG LL+MV+ VKD DFQ +WRFFFERK+ DLA +WPRH
Sbjct: 61 FSGLLLFTIGFLLLMVAFVKDIDFQ---------------MWRFFFERKLGDLAHEWPRH 105
Query: 121 AVGNIALAVS 130
AVG+IALA+S
Sbjct: 106 AVGDIALAIS 115
>Glyma06g40540.1
Length = 115
Score = 159 bits (401), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 97/144 (67%), Gaps = 29/144 (20%)
Query: 1 MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
MVSS++ L+C LHS IAL+CGA+MIFYSKEI+V G +TAS LQG+T HDQLLI TSDS
Sbjct: 1 MVSSIYALMCVLHSTIALTCGALMIFYSKEISVLGHRSKTASMLQGTTPHDQLLIDTSDS 60
Query: 61 FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
FSGLLLF IG LL+MV+ RK LA +WPRH
Sbjct: 61 FSGLLLFTIGFLLLMVAF-----------------------------RKHGGLAHEWPRH 91
Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
VG+IALA+SWVFFLV++WREKYD
Sbjct: 92 VVGDIALAISWVFFLVYTWREKYD 115
>Glyma01g24490.1
Length = 72
Score = 110 bits (274), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 60/72 (83%)
Query: 18 LSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDSFSGLLLFAIGILLVMVS 77
L+CGA+MIFYSKEI V G ETASK QG+T HDQLLI TSDSFSGLLLF IG LL+MV+
Sbjct: 1 LTCGALMIFYSKEIFVLGHRSETASKFQGTTPHDQLLIDTSDSFSGLLLFTIGFLLLMVA 60
Query: 78 LVKDRDFQSFFA 89
VKD DFQSFFA
Sbjct: 61 FVKDIDFQSFFA 72
>Glyma04g32370.1
Length = 72
Score = 110 bits (274), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 60/72 (83%)
Query: 18 LSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDSFSGLLLFAIGILLVMVS 77
L+CGA+MIFYSKEI V G G ET SKLQG+T HD LLI TSDSFSGLLLF IG LL+MV+
Sbjct: 1 LTCGALMIFYSKEIFVLGHGSETTSKLQGTTPHDLLLIDTSDSFSGLLLFTIGCLLLMVA 60
Query: 78 LVKDRDFQSFFA 89
VKD DFQSFFA
Sbjct: 61 FVKDIDFQSFFA 72
>Glyma08g38910.1
Length = 48
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 27/28 (96%)
Query: 117 WPRHAVGNIALAVSWVFFLVFSWREKYD 144
WP HAVG+IALA+SWVFFLV++WREKYD
Sbjct: 21 WPWHAVGDIALAISWVFFLVYTWREKYD 48