Miyakogusa Predicted Gene

Lj0g3v0326359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0326359.1 tr|F2CVG6|F2CVG6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,53.64,5e-19,POLY(A)
POLYMERASE-RELATED,NULL; POLY(A) POLYMERASE,NULL; no description,NULL;
Nucleotidyltransferas,CUFF.22190.1
         (111 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g09310.3                                                       100   6e-22
Glyma06g09310.2                                                       100   6e-22
Glyma06g09310.4                                                       100   6e-22
Glyma06g09310.1                                                       100   6e-22
Glyma06g09310.7                                                        99   9e-22
Glyma06g09310.6                                                        99   9e-22
Glyma06g09310.5                                                        99   9e-22
Glyma04g09170.2                                                        99   1e-21
Glyma04g09170.1                                                        98   2e-21
Glyma07g01780.1                                                        89   1e-18
Glyma08g21440.1                                                        88   2e-18
Glyma09g31080.1                                                        82   9e-17
Glyma07g11140.1                                                        81   3e-16
Glyma05g34210.1                                                        50   5e-07

>Glyma06g09310.3 
          Length = 727

 Score = 99.8 bits (247), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/111 (43%), Positives = 64/111 (57%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           + D GL  S EE   RK  + +L QIV SW+K++  Q       +   +A I T+GSY L
Sbjct: 50  LLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRL 109

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH    DID LC+ P Y +  EDFF++LH++L    EVSE+  V  A VP
Sbjct: 110 GVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVP 160


>Glyma06g09310.2 
          Length = 725

 Score = 99.8 bits (247), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/111 (43%), Positives = 64/111 (57%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           + D GL  S EE   RK  + +L QIV SW+K++  Q       +   +A I T+GSY L
Sbjct: 50  LLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRL 109

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH    DID LC+ P Y +  EDFF++LH++L    EVSE+  V  A VP
Sbjct: 110 GVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVP 160


>Glyma06g09310.4 
          Length = 721

 Score = 99.8 bits (247), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/111 (43%), Positives = 64/111 (57%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           + D GL  S EE   RK  + +L QIV SW+K++  Q       +   +A I T+GSY L
Sbjct: 50  LLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRL 109

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH    DID LC+ P Y +  EDFF++LH++L    EVSE+  V  A VP
Sbjct: 110 GVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVP 160


>Glyma06g09310.1 
          Length = 732

 Score = 99.8 bits (247), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/111 (43%), Positives = 64/111 (57%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           + D GL  S EE   RK  + +L QIV SW+K++  Q       +   +A I T+GSY L
Sbjct: 50  LLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRL 109

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH    DID LC+ P Y +  EDFF++LH++L    EVSE+  V  A VP
Sbjct: 110 GVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVP 160


>Glyma06g09310.7 
          Length = 650

 Score = 99.0 bits (245), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 48/111 (43%), Positives = 64/111 (57%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           + D GL  S EE   RK  + +L QIV SW+K++  Q       +   +A I T+GSY L
Sbjct: 50  LLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRL 109

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH    DID LC+ P Y +  EDFF++LH++L    EVSE+  V  A VP
Sbjct: 110 GVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVP 160


>Glyma06g09310.6 
          Length = 650

 Score = 99.0 bits (245), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 48/111 (43%), Positives = 64/111 (57%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           + D GL  S EE   RK  + +L QIV SW+K++  Q       +   +A I T+GSY L
Sbjct: 50  LLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRL 109

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH    DID LC+ P Y +  EDFF++LH++L    EVSE+  V  A VP
Sbjct: 110 GVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVP 160


>Glyma06g09310.5 
          Length = 650

 Score = 99.0 bits (245), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 48/111 (43%), Positives = 64/111 (57%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           + D GL  S EE   RK  + +L QIV SW+K++  Q       +   +A I T+GSY L
Sbjct: 50  LLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRL 109

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH    DID LC+ P Y +  EDFF++LH++L    EVSE+  V  A VP
Sbjct: 110 GVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVP 160


>Glyma04g09170.2 
          Length = 651

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 64/111 (57%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           + D GL  S EE   RK  + +L QIV +W+K++  Q       +   +A I T+GSY L
Sbjct: 49  LLDSGLYESNEESAARKEVLHRLDQIVKNWVKQLTRQRGYTDQMVEDANAVIFTFGSYRL 108

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH    DID LC+ P Y +  EDFFV+LH++L    EVSE+  V  A VP
Sbjct: 109 GVHGPGVDIDTLCIGPSYVNREEDFFVILHNILAEMEEVSELQPVPDAHVP 159


>Glyma04g09170.1 
          Length = 726

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/111 (43%), Positives = 64/111 (57%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           + D GL  S EE   RK  + +L QIV +W+K++  Q       +   +A I T+GSY L
Sbjct: 49  LLDSGLYESNEESAARKEVLHRLDQIVKNWVKQLTRQRGYTDQMVEDANAVIFTFGSYRL 108

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH    DID LC+ P Y +  EDFFV+LH++L    EVSE+  V  A VP
Sbjct: 109 GVHGPGVDIDTLCIGPSYVNREEDFFVILHNILAEMEEVSELQPVPDAHVP 159


>Glyma07g01780.1 
          Length = 532

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/111 (38%), Positives = 63/111 (56%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           +A  GL  S +E  KR+  + +L +IV SW+K++          +   +A ILT+GSY L
Sbjct: 40  LAASGLYESKDEAAKREEVLHRLGEIVKSWVKQLTRLRGYTGQMVEDANAIILTFGSYRL 99

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH   +D+D LC+ P Y +  EDFF  LH +L    EV+E+  +  A VP
Sbjct: 100 GVHGPGADLDTLCIGPSYVTREEDFFYTLHDILANVEEVTELQPIPDAHVP 150


>Glyma08g21440.1 
          Length = 694

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/111 (38%), Positives = 63/111 (56%)

Query: 1   MADEGLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGL 60
           +A  GL  S EE  KR+  + +L +IV +W+K++          +   +A ILT+GSY L
Sbjct: 40  LAVSGLYESKEEAAKREEVLHRLGEIVKNWVKQLTRLRGYTDQMVEDANAVILTFGSYRL 99

Query: 61  GVHSSESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           GVH   +D+D LC+ P Y +  EDFF  LH +L    EV+E+  +  A VP
Sbjct: 100 GVHGPGADLDTLCIGPSYVNREEDFFYTLHDILANIEEVTELQPIPDAHVP 150


>Glyma09g31080.1 
          Length = 757

 Score = 82.4 bits (202), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 45/107 (42%), Positives = 59/107 (55%)

Query: 5   GLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGLGVHS 64
           GL  S EE   R+  + +L QIV  W+K ++      +  +   +A I T+GSY LGVH 
Sbjct: 46  GLYESQEEAVGREEVLGRLDQIVKIWVKNISRAKGFNEQLVHEANAKIFTFGSYRLGVHG 105

Query: 65  SESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
             +DID LCV P +AS  EDFF  L  ML    EV+E+  V  A VP
Sbjct: 106 PGADIDTLCVGPRHASRDEDFFGELQKMLSEMQEVTELHPVPDAHVP 152


>Glyma07g11140.1 
          Length = 795

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 58/107 (54%)

Query: 5   GLVPSPEEEEKRKNAIQKLKQIVSSWIKKVAWQHRLPKHQIAVTSATILTYGSYGLGVHS 64
           GL  S EE   R+  + +L QIV  W+K ++      +  +   +A I T GSY LGVH 
Sbjct: 46  GLYESQEEAVVREEVLGRLDQIVKIWVKNISRAKGFNEQLVHEANAKIFTSGSYRLGVHG 105

Query: 65  SESDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
             +DID LCV P +AS  EDFF  L  ML    EV+E+  V  A VP
Sbjct: 106 PGADIDTLCVGPRHASRDEDFFGGLQKMLSEMQEVTELHPVPDAHVP 152


>Glyma05g34210.1 
          Length = 674

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/45 (53%), Positives = 30/45 (66%)

Query: 67  SDIDALCVAPFYASIAEDFFVVLHHMLKRRPEVSEILCVKSAKVP 111
           ++ID LCV P +AS  EDFF  LH ML + PEV+E+  V  A VP
Sbjct: 99  ANIDTLCVGPRHASRDEDFFGDLHRMLSKMPEVTELHPVPDAHVP 143