Miyakogusa Predicted Gene

Lj0g3v0326069.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0326069.1 Non Chatacterized Hit- tr|K3YYY6|K3YYY6_SETIT
Uncharacterized protein OS=Setaria italica GN=Si019492,50.62,5e-19,ABC
TRANSPORTER,NULL; ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A
(ABCA),ABC transporter A, ABCA,CUFF.22164.1
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g10670.1                                                       164   3e-41
Glyma05g01230.1                                                       161   1e-40
Glyma06g20370.1                                                       149   6e-37
Glyma04g34130.1                                                       149   9e-37

>Glyma17g10670.1 
          Length = 894

 Score =  164 bits (414), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 77/87 (88%), Positives = 85/87 (97%)

Query: 1   MTTSSDHEREVESLVMKLTPNANKIYHLSGTQKFELPKEEVRIADVFRAVEAAKKNFTVS 60
           MTTSSDHE++VE++V KLTPNANKIYHLSGTQKFELPKE+VRIADVF+AV+AAK+NFTVS
Sbjct: 808 MTTSSDHEKDVENMVQKLTPNANKIYHLSGTQKFELPKEDVRIADVFQAVDAAKRNFTVS 867

Query: 61  AWGLADTTLEDVFIKVAREAQAFDTLS 87
           AWGL DTTLEDVFIKVAREAQAFDTLS
Sbjct: 868 AWGLVDTTLEDVFIKVAREAQAFDTLS 894


>Glyma05g01230.1 
          Length = 909

 Score =  161 bits (408), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 75/87 (86%), Positives = 83/87 (95%)

Query: 1   MTTSSDHEREVESLVMKLTPNANKIYHLSGTQKFELPKEEVRIADVFRAVEAAKKNFTVS 60
           MTTSSDHE++VE++V KLTPNANKIYHLSGTQKFELPK +VRI DVF+AV+AAK+NFTVS
Sbjct: 823 MTTSSDHEKDVENMVQKLTPNANKIYHLSGTQKFELPKGDVRITDVFQAVDAAKRNFTVS 882

Query: 61  AWGLADTTLEDVFIKVAREAQAFDTLS 87
           AWGL DTTLEDVFIKVAREAQAFDTLS
Sbjct: 883 AWGLVDTTLEDVFIKVAREAQAFDTLS 909


>Glyma06g20370.1 
          Length = 888

 Score =  149 bits (376), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 69/85 (81%), Positives = 81/85 (95%)

Query: 1   MTTSSDHEREVESLVMKLTPNANKIYHLSGTQKFELPKEEVRIADVFRAVEAAKKNFTVS 60
           MTTS DHE++VE+LV +L+PNANKIYH+SGTQKFELPK+EV+IA+VF+AVE AK++FTVS
Sbjct: 803 MTTSMDHEKDVENLVRQLSPNANKIYHISGTQKFELPKDEVKIANVFQAVETAKRSFTVS 862

Query: 61  AWGLADTTLEDVFIKVAREAQAFDT 85
           AWGLADTTLEDVFIKVAR AQAFDT
Sbjct: 863 AWGLADTTLEDVFIKVARGAQAFDT 887


>Glyma04g34130.1 
          Length = 949

 Score =  149 bits (375), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 70/87 (80%), Positives = 81/87 (93%)

Query: 1   MTTSSDHEREVESLVMKLTPNANKIYHLSGTQKFELPKEEVRIADVFRAVEAAKKNFTVS 60
           MTTS DHE +VE+LV +L PNANKIYH+SGTQKFELPK+EV+IA+VF+AVE AK++FTVS
Sbjct: 863 MTTSIDHENDVENLVRQLFPNANKIYHISGTQKFELPKDEVKIANVFQAVETAKRSFTVS 922

Query: 61  AWGLADTTLEDVFIKVAREAQAFDTLS 87
           AWGLADTTLEDVFIKVAR AQAF+TLS
Sbjct: 923 AWGLADTTLEDVFIKVARGAQAFNTLS 949