Miyakogusa Predicted Gene

Lj0g3v0325919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0325919.1 tr|C8RZD4|C8RZD4_9RHOB Translation initiation
factor IF-3 OS=Rhodobacter sp. SW2 GN=infC PE=3
SV=1,33.97,5e-18,IF3_N,Translation initiation factor 3, N-terminal;
IF3_C,Translation initiation factor 3, C-terminal,CUFF.22148.1
         (384 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g42900.1                                                       409   e-114
Glyma20g24110.1                                                       372   e-103

>Glyma10g42900.1 
          Length = 547

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/406 (56%), Positives = 291/406 (71%), Gaps = 38/406 (9%)

Query: 1   MAFLHQIGKRKLKTVCIQLRRCYIRLPHDSSLNSTPKPYPSEIPRPCSVFHGRPSSVYNS 60
           MAF H+I    LKT+CIQ +RCY+  PH S    TPKP+P +IP P SVFHGRP+SV+N+
Sbjct: 1   MAFWHRIRNPNLKTLCIQFQRCYVHRPHAS----TPKPFPVDIPHPNSVFHGRPTSVFNT 56

Query: 61  VRFFAAPIQFQPKPKKEEDNGP-RLNDEIRAQFIRLVSDDGH-TVVSRFQALERARNLKL 118
           VRFFAAP+Q+Q K    ED+   RLN++I+A ++RLV+DDGH +++ RF+ALE A+ LKL
Sbjct: 57  VRFFAAPVQYQVKHNNVEDSSELRLNEKIKAPYVRLVADDGHHSILPRFEALEHAKTLKL 116

Query: 119 DLVEVDKNAKPPVCKIMDFHKEAYKKQEKDKERAKSKSEVTLRKGECKEVRISEKTESKD 178
           DLVEVDKNAKPPVCKIMDFHK+ Y++QE++KERAKS++E+TLRK + KEVR SEKTE+KD
Sbjct: 117 DLVEVDKNAKPPVCKIMDFHKQMYRRQEREKERAKSRAEMTLRK-DVKEVRFSEKTEAKD 175

Query: 179 IKMKADMVKKLMEKGYRVKCKATSSNENADLAGSSLSRLLAQIEDVCVVESGPHIARKEV 238
           +K KADM+KKLMEKGYRVKCK  S  EN DL     S +LA +EDVC+VESGPH+A+K+ 
Sbjct: 176 LKNKADMIKKLMEKGYRVKCK-VSGKENQDLT-VLFSPILALMEDVCIVESGPHMAKKDA 233

Query: 239 YMVVRHVKYGPSKKGAKKPQDAAQMALK---AEEGSANSSDSIEDKNHNSAESGFKF-EE 294
           +M+VRH+KYG SKKG KK Q+A  +  +    E  +ANSSDSIE ++H  AESGF+  EE
Sbjct: 234 FMIVRHIKYGLSKKGGKKLQNATNVTTQEGDMEISTANSSDSIEYESH--AESGFETEEE 291

Query: 295 VISDGDN------HIFFSD----ASTKDKDSGSP---AVLENRYKRADHPGENKSRSNTP 341
           V+SDG+        +F ++    AS  ++ + +P    V ENRY+      EN  +S   
Sbjct: 292 VLSDGNKLSKSSLSVFSNNVNMTASPNNQTNAAPEASPVSENRYRSQ----ENNVQS--- 344

Query: 342 NTQVPPAVAENRYQRTEPRNRFQQT---IPPNTTGPGVRDGGRWTP 384
           N QVPPAV ENRY+R EPR RFQQT      N  GPG RD  R  P
Sbjct: 345 NAQVPPAVTENRYKRIEPRGRFQQTSNNTCMNYQGPGARDAFRSPP 390


>Glyma20g24110.1 
          Length = 310

 Score =  372 bits (955), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/309 (63%), Positives = 244/309 (78%), Gaps = 15/309 (4%)

Query: 1   MAFLHQIGKRKLKTVCIQLRRCYIRLPHDSSLNSTPKPYPSEIPRPCSVFHGRPSSVYNS 60
           MAF H+I    LKT+CIQ +RCYI LPH     STPKP+P +IP   SVFHGRP+SV+N+
Sbjct: 1   MAFWHRIRNPNLKTLCIQFQRCYIHLPH----ASTPKPFPVDIPHQNSVFHGRPTSVFNT 56

Query: 61  VRFFAAPIQFQPKPKKEEDNGP-RLNDEIRAQFIRLVSDDGH-TVVSRFQALERARNLKL 118
           VRFFAAP+Q+Q K K EED+G  RLN++I+A ++RLV DDGH ++V RF+ALERA+ LKL
Sbjct: 57  VRFFAAPLQYQVKHKNEEDSGDLRLNEKIKAPYVRLVVDDGHHSIVPRFEALERAKTLKL 116

Query: 119 DLVEVDKNAKPPVCKIMDFHKEAYKKQEKDKERAKSKSEVTLRKGECKEVRISEKTESKD 178
           DLVEVDKNAKPPVCKIMDFHK+ YK+QE++KERAKSK+E+TLRK + KEVR SEKTE+KD
Sbjct: 117 DLVEVDKNAKPPVCKIMDFHKQMYKRQEREKERAKSKAEMTLRK-DVKEVRFSEKTEAKD 175

Query: 179 IKMKADMVKKLMEKGYRVKCKATSSNENADLAGSSLSRLLAQIEDVCVVESGPHIARKEV 238
           +K KADM+KKLMEKGYRVKCK  S  E+ DL     S +LA +EDVC+VESGPH+ +K+ 
Sbjct: 176 LKNKADMIKKLMEKGYRVKCK-VSGKEDQDLT-VLFSPILALMEDVCIVESGPHMGKKDA 233

Query: 239 YMVVRHVKYGPSKKGAKKPQDAAQ---MALKAEEGSANSSDSIEDKNHNSAESGFKF-EE 294
           +M+VRH+KYG SKKG KK Q+A          E+ +ANSSDSIE ++H  AESGF+  EE
Sbjct: 234 FMIVRHIKYGLSKKGGKKLQNATNDNSQEGDMEKSTANSSDSIEYESH--AESGFETEEE 291

Query: 295 VISDGDNHI 303
           V+SDGD+ +
Sbjct: 292 VLSDGDSFL 300