Miyakogusa Predicted Gene

Lj0g3v0325879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0325879.1 Non Chatacterized Hit- tr|I1MDL1|I1MDL1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2934
PE=,92.04,0,SUBFAMILY NOT NAMED,NULL; NFRKB-RELATED,Nuclear factor
related to kappa-B-binding protein; seg,NULL,CUFF.22146.1
         (338 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g04840.1                                                       605   e-173
Glyma13g40560.1                                                       456   e-128

>Glyma15g04840.1 
          Length = 433

 Score =  605 bits (1559), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 301/339 (88%), Positives = 308/339 (90%), Gaps = 3/339 (0%)

Query: 1   MLVKLVDSFANWLKCGQETLQQIGSLPAPPLALMQVNLDEKERFRDLRAQKSLNTINPNS 60
           MLVKLVDSFANWLKCGQETLQQIGSLPAPPL LMQVNLDEKERFRDLRAQKSLNTI P+S
Sbjct: 96  MLVKLVDSFANWLKCGQETLQQIGSLPAPPLELMQVNLDEKERFRDLRAQKSLNTIRPSS 155

Query: 61  EEVRTYFRKEEVLRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPP 120
           EEVRTYFRKEEVLRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPP
Sbjct: 156 EEVRTYFRKEEVLRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPP 215

Query: 121 HVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIVEEVSDAQINQVVSGALDRLHYERD 180
           HVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIVE+VSDAQINQVVSGALDRLHYERD
Sbjct: 216 HVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIVEDVSDAQINQVVSGALDRLHYERD 275

Query: 181 PCVQFDGERKLWVYLHXXXXXXXXXXXGTSSTKKWKRQKKDPADLTDQGAVTVAQQGTEE 240
           PCVQFDGERKLWVYLH           GTSSTKKWKRQKKD AD +DQG VTVA  GT E
Sbjct: 276 PCVQFDGERKLWVYLHREREEEDFEDDGTSSTKKWKRQKKDAADQSDQGTVTVACPGTGE 335

Query: 241 QSGYDLCSDLNVD-PPVIDDDKGVEFLSSDTRPNAEDHVDVNPASEEGNVCEGNSMAWEA 299
           QSGYDLCSDLNVD PP IDDDKG+E L +DTRPNAE HVDVN ASEEGN C+GNSMAWEA
Sbjct: 336 QSGYDLCSDLNVDPPPCIDDDKGMEPLPTDTRPNAEAHVDVNRASEEGNACDGNSMAWEA 395

Query: 300 LSLNPTATGELCQENSTNEDFDEESFGRERPVGLLSASL 338
           L LNPT   ELCQENSTNED D+ESFGRERPVGLLSASL
Sbjct: 396 LDLNPTR--ELCQENSTNEDLDDESFGRERPVGLLSASL 432


>Glyma13g40560.1 
          Length = 1340

 Score =  456 bits (1172), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/252 (87%), Positives = 231/252 (91%), Gaps = 1/252 (0%)

Query: 1    MLVKLVDSFANWLKCGQETLQQIGSLPAPPLALMQVNLDEKERFRDLRAQKSLNTINPNS 60
            MLVKLVDSFANWLKCGQETLQQIGSLPAPPLALMQVNLDEKERFRDLRAQKSLNTI+P+S
Sbjct: 1039 MLVKLVDSFANWLKCGQETLQQIGSLPAPPLALMQVNLDEKERFRDLRAQKSLNTISPSS 1098

Query: 61   EEVRTYFRKEEVLRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPP 120
            EEVRTYFRKEEVLRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPP
Sbjct: 1099 EEVRTYFRKEEVLRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPP 1158

Query: 121  HVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIVEEVSDAQINQVVSGALDRLHYERD 180
            HVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIVE+VSDAQINQVVSGALDRLHYERD
Sbjct: 1159 HVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIVEDVSDAQINQVVSGALDRLHYERD 1218

Query: 181  PCVQFDGERKLWVYLHXXXXXXXXXXXGTSSTKKWKRQKKDPADLTDQGAVTVAQQGTEE 240
            PCVQFDGERKLWVYLH           GTSSTKKWKRQKKD AD +DQG VTVA  GT E
Sbjct: 1219 PCVQFDGERKLWVYLHREREEEDFEDDGTSSTKKWKRQKKDAADQSDQGTVTVACPGTGE 1278

Query: 241  QSGYDLCSDLNV 252
            Q+   +C+ +++
Sbjct: 1279 QADM-ICAQISM 1289