Miyakogusa Predicted Gene

Lj0g3v0324999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324999.1 Non Chatacterized Hit- tr|I1JRI0|I1JRI0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27930
PE,92.05,0,SUBFAMILY NOT NAMED,NULL; TRAFFICKING PROTEIN PARTICLE
COMPLEX SUBUNIT 6B,NULL; Ligand-binding domai,CUFF.22086.1
         (176 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g40240.5                                                       346   8e-96
Glyma03g40240.4                                                       346   8e-96
Glyma19g42850.1                                                       345   1e-95
Glyma03g40240.1                                                       336   9e-93
Glyma03g40240.3                                                       237   6e-63
Glyma19g42850.2                                                       236   1e-62

>Glyma03g40240.5 
          Length = 176

 Score =  346 bits (887), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 162/176 (92%), Positives = 170/176 (96%)

Query: 1   MVREVSESCVDSLLTEMVSCYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFS 60
           MVREVSESC+DSLLTEMV+CYCNRFYANKPELAARRIEAIGYQVGHQLSERYTM+RPRF+
Sbjct: 1   MVREVSESCIDSLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMDRPRFT 60

Query: 61  DHLEAIKFICKDFWSEVFKKQVDNLKTNHRGTFVLQDNKFPWLSRMSVDPSAENVSSVED 120
           DHLEAIKFICKDFWSE+FKKQ+DNLKTNHRGTFVLQDNKF WL+RMS+DPS ENVS VED
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSIDPSTENVSPVED 120

Query: 121 NTSPTPESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVCIKA 176
            TSPT ESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVV IKA
Sbjct: 121 ITSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176


>Glyma03g40240.4 
          Length = 176

 Score =  346 bits (887), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 162/176 (92%), Positives = 170/176 (96%)

Query: 1   MVREVSESCVDSLLTEMVSCYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFS 60
           MVREVSESC+DSLLTEMV+CYCNRFYANKPELAARRIEAIGYQVGHQLSERYTM+RPRF+
Sbjct: 1   MVREVSESCIDSLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMDRPRFT 60

Query: 61  DHLEAIKFICKDFWSEVFKKQVDNLKTNHRGTFVLQDNKFPWLSRMSVDPSAENVSSVED 120
           DHLEAIKFICKDFWSE+FKKQ+DNLKTNHRGTFVLQDNKF WL+RMS+DPS ENVS VED
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSIDPSTENVSPVED 120

Query: 121 NTSPTPESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVCIKA 176
            TSPT ESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVV IKA
Sbjct: 121 ITSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176


>Glyma19g42850.1 
          Length = 176

 Score =  345 bits (886), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 162/176 (92%), Positives = 170/176 (96%)

Query: 1   MVREVSESCVDSLLTEMVSCYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFS 60
           MVREVSESCVDSLLTEMV+CYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRF+
Sbjct: 1   MVREVSESCVDSLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFT 60

Query: 61  DHLEAIKFICKDFWSEVFKKQVDNLKTNHRGTFVLQDNKFPWLSRMSVDPSAENVSSVED 120
           DHLEAIKFICKDFWSE+FKKQ+DNLKTNHRGTFVLQDNKF WL+RMS+DPS +NVS +ED
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSIDPSTDNVSPLED 120

Query: 121 NTSPTPESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVCIKA 176
            TSPT ESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVV IKA
Sbjct: 121 ITSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176


>Glyma03g40240.1 
          Length = 843

 Score =  336 bits (861), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 155/169 (91%), Positives = 164/169 (97%)

Query: 1   MVREVSESCVDSLLTEMVSCYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFS 60
           MVREVSESC+DSLLTEMV+CYCNRFYANKPELAARRIEAIGYQVGHQLSERYTM+RPRF+
Sbjct: 1   MVREVSESCIDSLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMDRPRFT 60

Query: 61  DHLEAIKFICKDFWSEVFKKQVDNLKTNHRGTFVLQDNKFPWLSRMSVDPSAENVSSVED 120
           DHLEAIKFICKDFWSE+FKKQ+DNLKTNHRGTFVLQDNKF WL+RMS+DPS ENVS VED
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSIDPSTENVSPVED 120

Query: 121 NTSPTPESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACS 169
            TSPT ESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPAC+
Sbjct: 121 ITSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACA 169


>Glyma03g40240.3 
          Length = 123

 Score =  237 bits (604), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 111/123 (90%), Positives = 117/123 (95%)

Query: 54  MERPRFSDHLEAIKFICKDFWSEVFKKQVDNLKTNHRGTFVLQDNKFPWLSRMSVDPSAE 113
           M+RPRF+DHLEAIKFICKDFWSE+FKKQ+DNLKTNHRGTFVLQDNKF WL+RMS+DPS E
Sbjct: 1   MDRPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSIDPSTE 60

Query: 114 NVSSVEDNTSPTPESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVC 173
           NVS VED TSPT ESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVV 
Sbjct: 61  NVSPVEDITSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVR 120

Query: 174 IKA 176
           IKA
Sbjct: 121 IKA 123


>Glyma19g42850.2 
          Length = 123

 Score =  236 bits (601), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 110/123 (89%), Positives = 117/123 (95%)

Query: 54  MERPRFSDHLEAIKFICKDFWSEVFKKQVDNLKTNHRGTFVLQDNKFPWLSRMSVDPSAE 113
           MERPRF+DHLEAIKFICKDFWSE+FKKQ+DNLKTNHRGTFVLQDNKF WL+RMS+DPS +
Sbjct: 1   MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSIDPSTD 60

Query: 114 NVSSVEDNTSPTPESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVC 173
           NVS +ED TSPT ESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVV 
Sbjct: 61  NVSPLEDITSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVR 120

Query: 174 IKA 176
           IKA
Sbjct: 121 IKA 123