Miyakogusa Predicted Gene

Lj0g3v0324759.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324759.1 Non Chatacterized Hit- tr|G7J5G4|G7J5G4_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,69.12,8e-19,RST,RST domain of plant C-terminal,CUFF.22066.1
         (75 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g09720.1                                                        96   8e-21
Glyma05g02210.1                                                        89   1e-18
Glyma04g35560.1                                                        86   9e-18

>Glyma17g09720.1 
          Length = 322

 Score = 95.9 bits (237), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 57/75 (76%)

Query: 1   MPFPTLISALSKVLPQPDIALLSRLHKAKQERKISRQELIQKVRQIAGDKLLTAVIKSYR 60
           M FP LIS LSK+LP PDIA +++ HK  +E++ISR ELIQKVR IAGDKLL +VIKS+R
Sbjct: 238 MAFPALISVLSKILPPPDIAYIAKFHKDYREKRISRHELIQKVRVIAGDKLLFSVIKSFR 297

Query: 61  AKKKPCKFSAYKVKE 75
           AKK P  F A K  E
Sbjct: 298 AKKIPASFKANKGNE 312


>Glyma05g02210.1 
          Length = 328

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 56/75 (74%)

Query: 1   MPFPTLISALSKVLPQPDIALLSRLHKAKQERKISRQELIQKVRQIAGDKLLTAVIKSYR 60
           M FP LIS LSK+LP  ++A +++ HK  +E++ISR ELIQKVR IAGDKLL +VIKS+R
Sbjct: 230 MAFPALISMLSKILPPSEVASIAKFHKDYREKRISRHELIQKVRVIAGDKLLLSVIKSFR 289

Query: 61  AKKKPCKFSAYKVKE 75
           AKK P  F   K KE
Sbjct: 290 AKKIPANFKDDKAKE 304


>Glyma04g35560.1 
          Length = 330

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 48/74 (64%), Positives = 57/74 (77%)

Query: 1   MPFPTLISALSKVLPQPDIALLSRLHKAKQERKISRQELIQKVRQIAGDKLLTAVIKSYR 60
           MPFPTLISALSKVLP  DIAL+S+ +K K+++KI R ELIQ+VR+IAGDKLL A IKSYR
Sbjct: 249 MPFPTLISALSKVLPPCDIALISKFYKDKKDKKILRHELIQRVREIAGDKLLVAAIKSYR 308

Query: 61  AKKKPCKFSAYKVK 74
             KK   F   + K
Sbjct: 309 DNKKKPSFLQSRSK 322