Miyakogusa Predicted Gene

Lj0g3v0324199.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324199.1 Non Chatacterized Hit- tr|C5WXS0|C5WXS0_SORBI
Putative uncharacterized protein Sb01g046500
OS=Sorghu,48.72,1e-18,seg,NULL; A_thal_3678: uncharacterized
plant-specific domain,Ovate  protein family, C-terminal;
Ovat,CUFF.22019.1
         (256 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16530.1                                                       119   3e-27
Glyma10g03300.1                                                       114   9e-26
Glyma10g39280.1                                                        76   4e-14
Glyma20g28570.1                                                        59   6e-09
Glyma15g01770.1                                                        58   8e-09

>Glyma02g16530.1 
          Length = 193

 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/170 (48%), Positives = 94/170 (55%), Gaps = 19/170 (11%)

Query: 71  SSIMINNFNTTFYXXXXXXXXXXXXNQIEPEPESKPADFATAFASQRFFFSSPGRSNSII 130
           SSIMI NFN+ +                EPEPE +PADFATAFASQRFFFSSPG SNS++
Sbjct: 31  SSIMIKNFNSIY-----DHSFSSTTTFFEPEPEPEPADFATAFASQRFFFSSPGLSNSLV 85

Query: 131 ERANTNSTAASRC------------NSNKSRQILDGSVAVPTYSPDPYADFLRSMQEMVE 178
           E  NTN +                    K + +  GSVAV TYSPDPY DF RSMQEMVE
Sbjct: 86  EYNNTNKSTTQHLPPLLREDSGDVDEKKKKKVLFKGSVAVATYSPDPYVDFRRSMQEMVE 145

Query: 179 ARPXXXXXXXXXXXXXXXXXXXXXXXXNQKSTHKFILRAFSDLLVTVMSF 228
           ARP                        N KSTHKFIL AF+DLLV++MSF
Sbjct: 146 ARP--ELMDVKSNWNVLHELLLCYLALNPKSTHKFILGAFADLLVSLMSF 193


>Glyma10g03300.1 
          Length = 159

 Score =  114 bits (285), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 82/165 (49%), Gaps = 22/165 (13%)

Query: 74  MINNFNTTFYXXXXXXXXXXXXNQIEPEPESKPADFATAFASQRFFFSSPGRSNSIIERA 133
           MI NFN+ +                EPEP    ADFATAFASQRFFFSSPG SNS++E  
Sbjct: 1   MIKNFNSIYDPTLTSHDHSFSSTFFEPEP----ADFATAFASQRFFFSSPGLSNSLVEYN 56

Query: 134 NTNSTAASR----------------CNSNKSRQILDGSVAVPTYSPDPYADFLRSMQEMV 177
           NTN +                        K + +  GSVAV TYSPDPY DF RSMQEMV
Sbjct: 57  NTNKSTTRHPALLREHGEKMKEEEEEEEKKKKVLFKGSVAVATYSPDPYVDFRRSMQEMV 116

Query: 178 EARPXXXXXXXXXXXXXXXXXXXXXXXXNQKSTHKFILRAFSDLL 222
           EARP                        N KSTHKFIL AF+DLL
Sbjct: 117 EARP--ELMDVKSNWNVLHELLLCYLALNPKSTHKFILGAFADLL 159


>Glyma10g39280.1 
          Length = 122

 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 58/118 (49%), Gaps = 13/118 (11%)

Query: 108 DFATAFASQRFFFSSPGRSNSIIERANTNSTAASRCNSNKSRQILDGSVAVPTYSPDPYA 167
           DFA+ FASQRFFFSSPG SNSI+E  +T +            +          YS +PY 
Sbjct: 17  DFASIFASQRFFFSSPGTSNSIVESPDTRTFVVPTGGGVGVPK----------YSLNPYV 66

Query: 168 DFLRSMQEMVEARPXXXXXXXXXXXXXXXXXXXXXXXXNQKSTHKFILRAFSDLLVTV 225
           DFLRSMQEM+ +R                         N   THK ILRAF+DL++ +
Sbjct: 67  DFLRSMQEMIRSR---QVLDITKDSEYLHELLLCYLALNPTHTHKHILRAFTDLVLEL 121


>Glyma20g28570.1 
          Length = 99

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 154 GSVAVPTYSPDPYADFLRSMQEMVEARPXXXXXXXXXXXXXXXXXXXXXXXXNQKSTHKF 213
           G V VP YS +PY DFLRSMQEM+ +R                         N   THKF
Sbjct: 6   GGVRVPKYSLNPYVDFLRSMQEMIRSR---QVLDITKDSEYLHELLLCYLALNPTHTHKF 62

Query: 214 ILRAFSDLLVTVMS 227
           ILRAF+DL++ ++S
Sbjct: 63  ILRAFTDLVLQLLS 76


>Glyma15g01770.1 
          Length = 249

 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 114 ASQRFFFSSPGRSNSIIERANTNSTAAS--------RCNSNKSRQILDGSVAVPTYSPDP 165
            S RFF    G S S++E A T+  AAS          NS +   + D S+A+ T S  P
Sbjct: 102 GSTRFFVKPAGFSGSLVEDAFTSDEAASISTINDVSSSNSYEKEALPDNSIALLTRSTSP 161

Query: 166 YADFLRSMQEMVEARPXXXXXXXXXXXXXXXXXXXXXXXXNQKSTHKFILRAFSDLLVTV 225
           Y DF RSMQEMV                            N+K +HKFIL AF D L+TV
Sbjct: 162 YEDFKRSMQEMV------NNHESVVDWDFMEELLFCYLNLNEKKSHKFILSAFVD-LITV 214

Query: 226 M 226
           M
Sbjct: 215 M 215