Miyakogusa Predicted Gene

Lj0g3v0324049.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324049.1 tr|Q9LQV4|Q9LQV4_ARATH F10B6.17 OS=Arabidopsis
thaliana GN=At1g14770/F10B6_2 PE=2
SV=1,30.77,0.00000000000005,seg,NULL,CUFF.22013.1
         (190 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g00630.1                                                       147   7e-36

>Glyma04g00630.1 
          Length = 640

 Score =  147 bits (371), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 82/159 (51%), Positives = 102/159 (64%), Gaps = 4/159 (2%)

Query: 18  VIEALAGFKGISISALQGLIDLAPVGPDDLGESTRELVALRCLEELSAASVQGVNHLDAS 77
           VIEAL   K I+   LQG ID APVG     ++T+ELVALRCLE+LS   V      +AS
Sbjct: 15  VIEALLTSKEITTPTLQGFIDAAPVGHHRFSKNTKELVALRCLEKLSTLVVDP----EAS 70

Query: 78  STLDFRAGFDFSRSCEEVLREIFHEIQLSDLEMAGEMVLKSNIPPFIMHKRASTVKCQLE 137
           S LD R GF+   SC++VL+EI  +I LS+L++AG  +LK +I PFI HKRA T KC LE
Sbjct: 71  SNLDSRFGFNVLGSCQDVLKEILGKIPLSNLKVAGAELLKWDICPFIKHKRAVTFKCHLE 130

Query: 138 QLKESILEGTLPLTDYLKERSGLFQSNRGYTVHENDREC 176
           QL+ESI + T P TDYLKE + LF  N      +  R C
Sbjct: 131 QLRESIFKNTHPDTDYLKETTRLFPQNSSRVCSKRSRVC 169