Miyakogusa Predicted Gene

Lj0g3v0324039.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324039.2 Non Chatacterized Hit- tr|C5XSM8|C5XSM8_SORBI
Putative uncharacterized protein Sb04g020760 OS=Sorghu,27.01,4e-16,no
description,Zinc finger, RING/FYVE/PHD-type; no
description,Homeodomain-like; Myb_DNA-bind_6,NULL,CUFF.22011.2
         (658 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g00630.1                                                       408   e-113
Glyma04g00620.1                                                       103   7e-22
Glyma13g26790.1                                                        82   2e-15
Glyma15g37810.1                                                        54   8e-07
Glyma18g05900.1                                                        54   8e-07
Glyma11g30740.1                                                        51   5e-06

>Glyma04g00630.1 
          Length = 640

 Score =  408 bits (1048), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/484 (48%), Positives = 289/484 (59%), Gaps = 69/484 (14%)

Query: 133 DDISNGCGIEISSDRFVSEGDKNNLMKKKHEENFSDMKRKKGSQLLVCEATTVPSVAPQS 192
           D   NG G+EIS D  VS+G+K NL  KK  E    +K  +  +LL+C+A  V  V P+ 
Sbjct: 190 DHARNGYGVEISGD-IVSQGEKINLETKKQAEQNLSLKCNEEDRLLICDANVVQPVVPEY 248

Query: 193 CLDSTLNVCPQHVSRVESCQTTSMDEIDDTVPVEPIPTIDNNANNIQLMIDESQPEQKEP 252
            + +T  + P H S  E C  TSMDE D+T     IPT D NA N Q +I+  QP+Q EP
Sbjct: 249 VMTTT--IIPHHTSVAEPCNNTSMDETDNTAH-HAIPTNDANAENNQHIINFHQPKQTEP 305

Query: 253 SVKSLHTSQQPVASNKTVIGTVNGC------------------AAKKYEYLCSRYTLGRD 294
            + SL+ SQ+PVAS+KTV   VNGC                   AKK+E+LCS  T+ +D
Sbjct: 306 DITSLNLSQKPVASDKTVFDMVNGCRAELSSDSDGYHNGKNDLEAKKHEFLCSPCTVDQD 365

Query: 295 LPAMTESTEQNL------------------CMKCNEGGKLMVCKTTTCQLMMHKNCLGAS 336
             AMTES EQNL                  CMKC+EGG+L+ CKTTTC LM+HKNCLGAS
Sbjct: 366 FSAMTESIEQNLRTVDQVFSSMTESIEQNLCMKCHEGGQLLACKTTTCPLMVHKNCLGAS 425

Query: 337 CQLDANGNVFCPFCAYSHTISEYLEAKKKASLARKELAFFISRGISNQPAERVHEFSRHE 396
            QLDA GN FCPFCAYSH ISEYLE+K+ ASLARKELA FIS+G   Q AE VHEF R E
Sbjct: 426 AQLDAKGNFFCPFCAYSHAISEYLESKENASLARKELAIFISKGKLIQAAEFVHEFHRQE 485

Query: 397 RSLSRKSRKCEHIHIKNNGSDPLTRSCENRGYHVGERTNEVNNLHFERSQQQASKSRVHS 456
              SRK+ KCEHIH+KNN  D L    +NR  HVGE  NE N+L FERS+QQA       
Sbjct: 486 HCFSRKNSKCEHIHVKNNEDDQLAGCEDNREDHVGEHANEANDLQFERSKQQA------- 538

Query: 457 SCRVKENVNNGLADDVTREEDGGKMPNAKSLTGGKVEGKEGPSDHIDKHEGGCFSCKRPN 516
                         +V REE+ GKMP     T G+VE  E P+DH+D H G  F+ ++ N
Sbjct: 539 --------------EVLREEEIGKMP-----TVGRVEESEVPTDHVDGHVGDKFASEKTN 579

Query: 517 IVPGNQSCAGEQVPKNMTKQHNMGAMVEPDCAHDTGKAEISEGECEKHSISRDSTSFHKQ 576
           I P + +   E+VP+ MTKQHN+   +EP CA DTGK +ISE E EKHS    S  F K 
Sbjct: 580 IAPESNA---EEVPQEMTKQHNIDGTIEPVCAQDTGKEKISEDESEKHSNPLYSLRFRKH 636

Query: 577 EVQF 580
           E Q+
Sbjct: 637 ETQW 640


>Glyma04g00620.1 
          Length = 68

 Score =  103 bits (257), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 56/71 (78%), Gaps = 5/71 (7%)

Query: 588 QSRRKKIPWTAEEEELIQEGVQKFGCNDQNIPWKKIWAFGSHVFEQDGKRRMPQDLKDKW 647
           Q RRKKIPWTAEEEE I+EGVQKFG       WKKI  FGSHVF++ GKRR P DLKDKW
Sbjct: 3   QLRRKKIPWTAEEEEKIKEGVQKFGKE-----WKKILQFGSHVFDKVGKRRTPHDLKDKW 57

Query: 648 KNMCKAHSKQK 658
           +NMCKAHSK K
Sbjct: 58  RNMCKAHSKSK 68


>Glyma13g26790.1 
          Length = 389

 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 3/73 (4%)

Query: 584 QATPQSRRKKIPWTAEEEELIQEGVQKFGCNDQNIPWKKIWAFGSHVFEQDGKRRMPQDL 643
           Q++  ++RK++ WTAEEE++++EGV KF   +QNIPW+KI  FG  VF++    R P DL
Sbjct: 310 QSSLAAKRKRLLWTAEEEKVLKEGVSKFSTENQNIPWRKILEFGCRVFDE---TRTPVDL 366

Query: 644 KDKWKNMCKAHSK 656
           KDKWKN+    S+
Sbjct: 367 KDKWKNIISKKSR 379


>Glyma15g37810.1 
          Length = 526

 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 303 EQNLCMKCNEGGK----LMVCKTTTCQLMMHKNCLGASCQLDANGNVFCPFCAYSHTISE 358
           ++ +C+ C+  G+    +++C    C + +H  CLG   + D +GN  CP+C Y   +  
Sbjct: 72  DKTICIHCDNKGEEAEGVLICGGRGCPVAVHATCLGFEPEFDDSGNFCCPYCWYKRAVDT 131

Query: 359 YLEAKKKASLARKELAFFISR 379
               ++KA  A+ EL+ F  +
Sbjct: 132 CRRLREKAMKAKGELSRFFGQ 152


>Glyma18g05900.1 
          Length = 468

 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 9/85 (10%)

Query: 568 RDSTSFHKQEVQFSKSQATPQSRRKKIPWTAEEEELIQEGVQKFGCNDQNIPWKKIWAFG 627
           R + +F  ++     SQ   Q RR+K  W++ EEE ++ GV+ FG  +    W  I +F 
Sbjct: 393 RSARTFEGED-SIDNSQQARQPRRRKRKWSSLEEETLRAGVKMFGEGN----WATIRSFY 447

Query: 628 SHVFEQDGKRRMPQDLKDKWKNMCK 652
           S++FE     R   DLKDKW+NM +
Sbjct: 448 SNIFEN----RSGVDLKDKWRNMIR 468


>Glyma11g30740.1 
          Length = 220

 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 8/65 (12%)

Query: 588 QSRRKKIPWTAEEEELIQEGVQKFGCNDQNIPWKKIWAFGSHVFEQDGKRRMPQDLKDKW 647
           Q RR+K  W++ EEE ++ GV+ FG  +    W  I +F S+VFE     R   DLKDKW
Sbjct: 164 QPRRRKRKWSSLEEETLRAGVKMFGEGN----WASIRSFYSNVFEN----RSGVDLKDKW 215

Query: 648 KNMCK 652
           +NM +
Sbjct: 216 RNMIR 220