Miyakogusa Predicted Gene
- Lj0g3v0323599.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0323599.1 tr|G7JGG5|G7JGG5_MEDTR Ferredoxin-6 OS=Medicago
truncatula GN=MTR_4g098490 PE=2 SV=1,79.79,0,2Fe-2S
ferredoxin-like,2Fe-2S ferredoxin-type domain; Fer2,2Fe-2S
ferredoxin-type domain; fdx_plant:,CUFF.21981.1
(184 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g23690.1 257 5e-69
Glyma17g16610.1 256 1e-68
Glyma05g23690.2 202 1e-52
Glyma05g23690.3 201 3e-52
Glyma20g24500.1 69 3e-12
Glyma12g29090.1 68 5e-12
Glyma12g29110.1 68 7e-12
Glyma12g09500.2 67 1e-11
Glyma12g09500.1 67 1e-11
Glyma11g18980.1 67 1e-11
Glyma10g42540.2 66 2e-11
Glyma10g42540.1 66 2e-11
Glyma08g13360.1 63 1e-10
Glyma12g29100.1 63 2e-10
Glyma05g30200.1 60 1e-09
Glyma01g44850.1 55 5e-08
Glyma11g00800.1 54 8e-08
Glyma08g20110.1 48 5e-06
>Glyma05g23690.1
Length = 179
Score = 257 bits (656), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/185 (70%), Positives = 140/185 (75%), Gaps = 7/185 (3%)
Query: 1 MALSFLRIPGNCCIPYTNL-QPFPSKNILRKTTVVAAAAELQAPMGLAGGTDYEFPGGNV 59
MAL LRIPG +P TN Q FPS N RK T A AEL + GG Y+ P +V
Sbjct: 1 MALPLLRIPG---MPLTNQHQSFPS-NTRRKATT--AKAELGTAVARTGGAGYQSPSVDV 54
Query: 60 PTHKVTVHDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQ 119
PTHKVTVHDRQRG+VHEF VPEDQYILHTAE+QNI LPFACRHGCCTSCAVRIK GQI+Q
Sbjct: 55 PTHKVTVHDRQRGIVHEFVVPEDQYILHTAEAQNITLPFACRHGCCTSCAVRIKKGQIRQ 114
Query: 120 PQALGISAELREKGYALLCVSFPTSXXXXXXXXXXXXYWLQFGRYFARGPVERDDYALEL 179
P+ALGISAELR+KGYALLCV FPTS YWLQFGRYFARGPVERDDYALEL
Sbjct: 115 PEALGISAELRDKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPVERDDYALEL 174
Query: 180 AMGDE 184
AM DE
Sbjct: 175 AMADE 179
>Glyma17g16610.1
Length = 179
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/185 (70%), Positives = 140/185 (75%), Gaps = 7/185 (3%)
Query: 1 MALSFLRIPGNCCIPYTNL-QPFPSKNILRKTTVVAAAAELQAPMGLAGGTDYEFPGGNV 59
MAL LRIPG IP Q FPS N RK T A AEL+ + GGT Y+ P +V
Sbjct: 1 MALPLLRIPG---IPLAKQHQSFPS-NTRRKATT--AQAELETAVARTGGTGYQSPSVDV 54
Query: 60 PTHKVTVHDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQ 119
PTHKV VHDRQRG+VHEF VPEDQYILHTAE+QNI LPFACRHGCCTSCAVRIKNG+I+Q
Sbjct: 55 PTHKVIVHDRQRGIVHEFVVPEDQYILHTAEAQNITLPFACRHGCCTSCAVRIKNGKIRQ 114
Query: 120 PQALGISAELREKGYALLCVSFPTSXXXXXXXXXXXXYWLQFGRYFARGPVERDDYALEL 179
P+ALGISAELR+KGYALLCV FPTS YWLQFGRYFARGPVERDDYALEL
Sbjct: 115 PEALGISAELRDKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPVERDDYALEL 174
Query: 180 AMGDE 184
AM DE
Sbjct: 175 AMADE 179
>Glyma05g23690.2
Length = 159
Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/145 (71%), Positives = 113/145 (77%), Gaps = 7/145 (4%)
Query: 1 MALSFLRIPGNCCIPYTNL-QPFPSKNILRKTTVVAAAAELQAPMGLAGGTDYEFPGGNV 59
MAL LRIPG +P TN Q FPS N RK T A AEL + GG Y+ P +V
Sbjct: 1 MALPLLRIPG---MPLTNQHQSFPS-NTRRKATT--AKAELGTAVARTGGAGYQSPSVDV 54
Query: 60 PTHKVTVHDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQ 119
PTHKVTVHDRQRG+VHEF VPEDQYILHTAE+QNI LPFACRHGCCTSCAVRIK GQI+Q
Sbjct: 55 PTHKVTVHDRQRGIVHEFVVPEDQYILHTAEAQNITLPFACRHGCCTSCAVRIKKGQIRQ 114
Query: 120 PQALGISAELREKGYALLCVSFPTS 144
P+ALGISAELR+KGYALLCV FPTS
Sbjct: 115 PEALGISAELRDKGYALLCVGFPTS 139
>Glyma05g23690.3
Length = 156
Score = 201 bits (512), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/145 (71%), Positives = 113/145 (77%), Gaps = 7/145 (4%)
Query: 1 MALSFLRIPGNCCIPYTNL-QPFPSKNILRKTTVVAAAAELQAPMGLAGGTDYEFPGGNV 59
MAL LRIPG +P TN Q FPS N RK T A AEL + GG Y+ P +V
Sbjct: 1 MALPLLRIPG---MPLTNQHQSFPS-NTRRKATT--AKAELGTAVARTGGAGYQSPSVDV 54
Query: 60 PTHKVTVHDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQ 119
PTHKVTVHDRQRG+VHEF VPEDQYILHTAE+QNI LPFACRHGCCTSCAVRIK GQI+Q
Sbjct: 55 PTHKVTVHDRQRGIVHEFVVPEDQYILHTAEAQNITLPFACRHGCCTSCAVRIKKGQIRQ 114
Query: 120 PQALGISAELREKGYALLCVSFPTS 144
P+ALGISAELR+KGYALLCV FPTS
Sbjct: 115 PEALGISAELRDKGYALLCVGFPTS 139
>Glyma20g24500.1
Length = 154
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 72 GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
G +EF P+D YIL +AE+ + LP++CR G C++CA ++ +G + Q + E
Sbjct: 69 GEENEFEAPDDTYILDSAENAGVELPYSCRAGACSTCAGQVVSGSVDQADQSFLDDHQIE 128
Query: 132 KGYALLCVSFPTS 144
KGY L CVS+P S
Sbjct: 129 KGYLLTCVSYPKS 141
>Glyma12g29090.1
Length = 145
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 75 HEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELREKGY 134
EF P+D YIL AE I+LP++CR G C++CA ++ +G++ Q + + + G+
Sbjct: 62 QEFECPDDIYILDQAEENGIDLPYSCRAGSCSACAAKVVSGKLDQSDGSFLDDDQIDAGF 121
Query: 135 ALLCVSFPTS 144
L CV++PTS
Sbjct: 122 VLTCVAYPTS 131
>Glyma12g29110.1
Length = 147
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 75 HEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELREKGY 134
EF P+D YIL AE + + LP++CR G C+ CA ++ +G++ A + E E G+
Sbjct: 63 KEFECPDDVYILDQAEEEGLELPYSCRAGSCSVCAGKVVSGKVDNSDATFLEDEQLEAGF 122
Query: 135 ALLCVSFPTS 144
L CV++PTS
Sbjct: 123 TLTCVAYPTS 132
>Glyma12g09500.2
Length = 151
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 72 GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
G +EF +D YIL AES + LP++CR G C++CA +I +G + Q + +
Sbjct: 66 GTENEFEATDDTYILDAAESAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQLK 125
Query: 132 KGYALLCVSFPTS 144
+G+ L CVS+PT+
Sbjct: 126 EGFVLTCVSYPTA 138
>Glyma12g09500.1
Length = 151
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 72 GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
G +EF +D YIL AES + LP++CR G C++CA +I +G + Q + +
Sbjct: 66 GTENEFEATDDTYILDAAESAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQLK 125
Query: 132 KGYALLCVSFPTS 144
+G+ L CVS+PT+
Sbjct: 126 EGFVLTCVSYPTA 138
>Glyma11g18980.1
Length = 155
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 3 LSFLRIPGNCCIPYTNLQPFPSKNILRKTTVVAAAAELQAPMGLAGGTDYEFPGGNVPTH 62
LS +++ +C + P ++ + + + GL + + + ++
Sbjct: 4 LSTVKVSPHCMFQTASKNPSTVATTMKCPSSFGSVKSISRSFGLKSSSSFRVTA--MASY 61
Query: 63 KVTVHDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQA 122
KV + G +EF +D YIL AES + LP++CR G C++CA +I G + Q
Sbjct: 62 KVKLIGPD-GTENEFEATDDTYILDAAESAGVELPYSCRAGACSTCAGKIVAGSVDQSDG 120
Query: 123 LGISAELREKGYALLCVSFPTS 144
+ ++G+ L CVS+PT+
Sbjct: 121 SFLDDNQLKEGFVLTCVSYPTA 142
>Glyma10g42540.2
Length = 154
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 72 GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
G +EF P+D YIL AE+ + LP++CR G C++CA + +G + Q + +
Sbjct: 69 GEENEFEAPDDTYILDAAENAGVELPYSCRAGACSTCAGHVVSGSVDQADQSFLDDHQIK 128
Query: 132 KGYALLCVSFPTS 144
KGY L CVS+P S
Sbjct: 129 KGYLLTCVSYPKS 141
>Glyma10g42540.1
Length = 154
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 72 GVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELRE 131
G +EF P+D YIL AE+ + LP++CR G C++CA + +G + Q + +
Sbjct: 69 GEENEFEAPDDTYILDAAENAGVELPYSCRAGACSTCAGHVVSGSVDQADQSFLDDHQIK 128
Query: 132 KGYALLCVSFPTS 144
KGY L CVS+P S
Sbjct: 129 KGYLLTCVSYPKS 141
>Glyma08g13360.1
Length = 144
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 76 EFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELREKGYA 135
EF P+D +I+ AE + I LP++CR G C SC +I G + Q + E E G+
Sbjct: 63 EFECPDDVFIVDKAEEEGIELPYSCRAGSCVSCVGKIVKGDVDQSDGSFLDDEQIESGWV 122
Query: 136 LLCVSFPTS 144
L CV+ P S
Sbjct: 123 LTCVALPRS 131
>Glyma12g29100.1
Length = 147
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 75 HEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELREKGY 134
EF P+D +IL AE I+LP++C+ G C+SCA ++ +G++ Q + G+
Sbjct: 65 QEFECPDDVFILEKAEEFGIDLPYSCKAGACSSCAGKVVSGKVDQSDGSYLDDTQIGNGF 124
Query: 135 ALLCVSFPTS 144
L CV++PTS
Sbjct: 125 VLTCVAYPTS 134
>Glyma05g30200.1
Length = 147
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 76 EFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELREKGYA 135
EF P+D +I+ AE + I LP++CR G C SC +I G + Q + E + G+
Sbjct: 66 EFECPDDVFIVDKAEDEGIELPYSCRAGSCVSCVGKIVEGNVDQSDGSFLDDEQIDSGWV 125
Query: 136 LLCVSFPTS 144
L CV+ P S
Sbjct: 126 LTCVAQPRS 134
>Glyma01g44850.1
Length = 147
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 58 NVPTHKVTV-HDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQ 116
+V ++KV + HD G E V D+ IL A +++P C+ G C +C R+ +G
Sbjct: 42 SVRSYKVVIEHD---GESTEVEVEPDETILSKALDSGLSVPHDCKLGVCMTCPARLISGS 98
Query: 117 IKQPQALGISAELREKGYALLCVSFPTS 144
+ Q + +S ++ E+GYALLC ++P S
Sbjct: 99 VDQSDGM-LSDDVVERGYALLCAAYPQS 125
>Glyma11g00800.1
Length = 103
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 61 THKVTV-HDRQRGVVHEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQ 119
++KV + HD G E V D+ IL A +++P C+ G C +C R+ +G + Q
Sbjct: 1 SYKVVIEHD---GESTEVEVEPDETILSKALDSGLSVPHDCKLGVCMTCPARLISGSVDQ 57
Query: 120 PQALGISAELREKGYALLCVSFPTS 144
+ +S ++ E+GYALLC ++P S
Sbjct: 58 SDGM-LSDDVVERGYALLCAAYPQS 81
>Glyma08g20110.1
Length = 100
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 75 HEFSVPEDQYILHTAESQNINLPFACRHGCCTSCAVRIKNGQIKQPQALGISAELREKGY 134
EF P+D IL AE + + LP++CR G C+ CA G+++Q + + G+
Sbjct: 22 QEFECPDDVCILDQAEEKGLELPYSCRAGSCSVCA-----GKVEQSDGNFLDDDQIVAGF 76
Query: 135 ALLCVSFPTS 144
L V++PTS
Sbjct: 77 VLTRVAYPTS 86