Miyakogusa Predicted Gene

Lj0g3v0323479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0323479.1 Non Chatacterized Hit- tr|I1L0E1|I1L0E1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36294 PE,87.35,0,DNA/RNA
polymerases,NULL; seg,NULL; RVT_1,Reverse transcriptase;
Intron_maturas2,Domain X; PREDICTED,CUFF.21963.1
         (656 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g02720.1                                                      1154   0.0  
Glyma15g13600.1                                                      1110   0.0  
Glyma15g10110.1                                                       708   0.0  
Glyma13g28930.1                                                       530   e-150
Glyma16g20740.1                                                        67   7e-11

>Glyma09g02720.1 
          Length = 707

 Score = 1154 bits (2985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/656 (86%), Positives = 603/656 (91%), Gaps = 4/656 (0%)

Query: 1   MWIDNFRHPDRVVTNLSSSLRRFELWLLAYQKVLTDETGAYTPRSTIPRSQLEDLLALRN 60
           MWIDNFRHPDR VTNLSS LRRF+LW+LAYQKV TD+TG+YT RS++  S L+DLLALRN
Sbjct: 56  MWIDNFRHPDRAVTNLSSFLRRFDLWVLAYQKVATDDTGSYTSRSSLHASTLQDLLALRN 115

Query: 61  AVLDGNFKWGARLKFHIKSPKDKTDYDSLSKRKIKIILTTTQPAPFQDKIVQEVLLMILE 120
           AVLD  FKWG+RLKF IKSPKDKTDYDSLSKRKIK ILTTTQPAPFQD+IV EVLLMILE
Sbjct: 116 AVLDAKFKWGSRLKFFIKSPKDKTDYDSLSKRKIKTILTTTQPAPFQDRIVHEVLLMILE 175

Query: 121 PIYEARFSSKSFAFRPGRTPHPVLRVIRRSFAGYLWYIKGDLSTVLDGMKVGLVINAVMR 180
           PIYE RFS KS+AFRPGRTPH VLRVIRRSFAGYLWYIKGD S +LDGMKVGLVIN+VMR
Sbjct: 176 PIYEPRFSPKSYAFRPGRTPHTVLRVIRRSFAGYLWYIKGDFSVLLDGMKVGLVINSVMR 235

Query: 181 DVRDKMIIDLLKSALVTPVVTTKVDDREPXXXXXXXXXXXRVLAEDEPKPDPYWLDTFFG 240
           DVRDK+++DL+K ALVTPVV T V+ +E            RVLAEDEPKPDPYWLDTFFG
Sbjct: 236 DVRDKLVVDLIKDALVTPVVVTTVEKKE--KKKKRKYQKKRVLAEDEPKPDPYWLDTFFG 293

Query: 241 FAPEEAEKVPKWGHCGVLSPLLANVCLDELDRWMEGKIKEFYVPSKSDVIWNSPEGQAEQ 300
           FAPEEAE+VP WGHCGVLSPLLANVCLDELD WMEGKIKEFYVPSKSDVIWNSPE   EQ
Sbjct: 294 FAPEEAERVPNWGHCGVLSPLLANVCLDELDTWMEGKIKEFYVPSKSDVIWNSPE--EEQ 351

Query: 301 GNTSWPEFVPTSGPDKTRKIDYIRYGGHILIGVRGPRADAATLRKQLIEFCDEKLMLKLD 360
           GNTSWPEFVPTSGPDKTRK+D++RYGGH+LIGVRGPRADAA LRKQLIEFCD++ MLKLD
Sbjct: 352 GNTSWPEFVPTSGPDKTRKMDFVRYGGHVLIGVRGPRADAAALRKQLIEFCDQRFMLKLD 411

Query: 361 NESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKQCIRQ 420
           NESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKQCI+Q
Sbjct: 412 NESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKQCIKQ 471

Query: 421 FRKLMFLKGDRDPDPQPCFRMFHATQAHTNAQMNKFLATVVEWYRYADNRKKIVNFCSYI 480
           FRKL FLKGDRDPDPQPCFRMFHATQAHTNAQMNKFL+T+VEWYRYADNRKKIVNFCSYI
Sbjct: 472 FRKLSFLKGDRDPDPQPCFRMFHATQAHTNAQMNKFLSTMVEWYRYADNRKKIVNFCSYI 531

Query: 481 IRGSLAKLYAAKYKLRSRAKVYKIGARNLSRPLKEKKGQSPEYHNLLRMGLAESIDGLQF 540
           IRGSLAKLYAAKYKLRSRAKVYKIGARNLSRPLKEKKGQSPEYHNLLRMGLAESIDGLQ+
Sbjct: 532 IRGSLAKLYAAKYKLRSRAKVYKIGARNLSRPLKEKKGQSPEYHNLLRMGLAESIDGLQY 591

Query: 541 TRMSLVPETDYSPFPSNWRPDHEKSLLEYIKLEDPKTMEEQQNCIREQGLVTPQDYISML 600
           TRMSLVPETDYS FPSNWRPDHEK LLEYIKLEDPKT+EEQ++CIREQGLV+PQDYISML
Sbjct: 592 TRMSLVPETDYSLFPSNWRPDHEKLLLEYIKLEDPKTLEEQRDCIREQGLVSPQDYISML 651

Query: 601 VWNYKRNSLPTDHLSSLKSNESVVGHQPLLVASNQDDNDTKSKEEENDARMNPAQM 656
           VWNYKRNSLP D LS ++SNESVVG+Q LLV SNQDD D  ++EEEND RMN AQM
Sbjct: 652 VWNYKRNSLPMDQLSLVRSNESVVGNQHLLVGSNQDDQDHTNQEEENDGRMNAAQM 707


>Glyma15g13600.1 
          Length = 692

 Score = 1110 bits (2872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/654 (84%), Positives = 583/654 (89%), Gaps = 23/654 (3%)

Query: 1   MWIDNFRHPDRVVTNLSSSLRRFELWLLAYQKVLTDETGAYTPRSTIPRSQLEDLLALRN 60
           MWIDNFRHPDR VTNLS  LRRF+LW+LAYQKV TD+TG+YTPRS++  S L+DLLALRN
Sbjct: 59  MWIDNFRHPDRAVTNLSPLLRRFDLWVLAYQKVATDDTGSYTPRSSLHASTLQDLLALRN 118

Query: 61  AVLDGNFKWGARLKFHIKSPKDKTDYDSLSKRKIKIILTTTQPAPFQDKIVQEVLLMILE 120
           AVLD  FKWGARLKF IKSPKDKTDYDSLSKRKIK ILTTTQPAPFQD+IV EVLLMILE
Sbjct: 119 AVLDAKFKWGARLKFFIKSPKDKTDYDSLSKRKIKTILTTTQPAPFQDRIVHEVLLMILE 178

Query: 121 PIYEARFSSKSFAFRPGRTPHPVLRVIRRSFAGYLWYIKGDLSTVLDGMKVGLVINAVMR 180
           PIYE RFS KS+AFRPGRTPH VLRVIRRSFAGYLWYIKG+ S +LDGMKVGLVIN+VMR
Sbjct: 179 PIYEPRFSPKSYAFRPGRTPHTVLRVIRRSFAGYLWYIKGNFSVLLDGMKVGLVINSVMR 238

Query: 181 DVRDKMIIDLLKSALVTPVVTTKVDDREPXXXXXXXXXXXRVLAEDEPKPDPYWLDTFFG 240
           DVRDK+++DL+K ALVTPVV T V+ +E            RVLAEDEPKPDPYWLDTFFG
Sbjct: 239 DVRDKLVVDLIKDALVTPVVVTTVEKKE--KKKKRKYQKKRVLAEDEPKPDPYWLDTFFG 296

Query: 241 FAPEEAEKVPKWGHCGVLSPLLANVCLDELDRWMEGKIKEFYVPSKSDVIWNSPEGQAEQ 300
           FAPEEAE+VP WGHCGVLSPLLANVCLDELDRWMEGKIKEFYVPSKSDVIWNSPE   EQ
Sbjct: 297 FAPEEAERVPNWGHCGVLSPLLANVCLDELDRWMEGKIKEFYVPSKSDVIWNSPE--EEQ 354

Query: 301 GNTSWPEFVPTSGPDKTRKIDYIRYGGHILIGVRGPRADAATLRKQLIEFCDEKLMLKLD 360
           GNTSWPEFVPTSGPDKTRK+D++RYGGH+LIGVRGPRADAA LRKQLIEFCD + MLKLD
Sbjct: 355 GNTSWPEFVPTSGPDKTRKMDFLRYGGHVLIGVRGPRADAAALRKQLIEFCDLRFMLKLD 414

Query: 361 NESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKQCIRQ 420
           NESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKQCI+Q
Sbjct: 415 NESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKQCIKQ 474

Query: 421 FRKLMFLKGDRDPDPQPCFRMFHATQAHTNAQMNKFLATVVEWYRYADNRKKIVNFCSYI 480
           FRKL FLKGDRDPDPQPCFRMFHATQAHTNAQMNKFL+T+VEWYRYADNRKKIVNFCSYI
Sbjct: 475 FRKLSFLKGDRDPDPQPCFRMFHATQAHTNAQMNKFLSTMVEWYRYADNRKKIVNFCSYI 534

Query: 481 IRGSLAKLYAAKYKLRSRAKVYKIGARNLSRPLKEKKGQSPEYHNLLRMGLAESIDGLQF 540
           IRGSLAKLYAAKYKLRSRAKVYKIGARNLSRPLKEKKGQSPEY NLLRMGLAESIDGLQ+
Sbjct: 535 IRGSLAKLYAAKYKLRSRAKVYKIGARNLSRPLKEKKGQSPEYQNLLRMGLAESIDGLQY 594

Query: 541 TRMSLVPETDYSPFPSNWRPDHEKSLLEYIKLEDPKTMEEQQNCIREQGLVTPQDYISML 600
           TRMSLVPETDYSPFPSNWRPDHEK LLEYIKLEDPKT+EEQ++CIREQGLV+PQDYIS L
Sbjct: 595 TRMSLVPETDYSPFPSNWRPDHEKLLLEYIKLEDPKTLEEQRDCIREQGLVSPQDYISRL 654

Query: 601 VWNYKRNSLPTDHLSSLKSNESVVGHQPLLVASNQDDNDTKSKEEENDARMNPA 654
           VWNYKRNSLP D LS                    DD D  +KEEEND RMN A
Sbjct: 655 VWNYKRNSLPMDQLS-------------------LDDQDHTNKEEENDGRMNAA 689


>Glyma15g10110.1 
          Length = 695

 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/612 (54%), Positives = 436/612 (71%), Gaps = 9/612 (1%)

Query: 1   MWIDNFRHPDRVVTNLSSSLRRFELWLLAYQKVLTDETGAYTPRSTIPRSQLEDLLALRN 60
           +W+  F        NL+  L  F+LWLLAYQ+     TG + PR+ +  + L  LL+LRN
Sbjct: 53  LWVKTFSSSTTSFPNLTGFLSNFDLWLLAYQRSCAHATGTFPPRNAVHATVLHSLLSLRN 112

Query: 61  AVLDGNFKWGARLKFHIKSPKDKTDYDSLSKRKIKIILTTTQPAPFQDKIVQEVLLMILE 120
           AV+   F+W  +    +++P D      LSKRK +  + + +P  FQD++VQE+LLMILE
Sbjct: 113 AVIRNRFEWNDKTNPLLRAPNDAAVSKPLSKRKFRAAIQSGKPC-FQDRVVQEILLMILE 171

Query: 121 PIYEARFSSKSFAFRPGRTPHPVLRVIRRSFAGYLWYIKGDLSTVLDGMKVGLVINAVMR 180
           P++E RFS KS AFRPGR  H V+R IR +FAGYLW++KGDL+ +LD +   +V+ ++ +
Sbjct: 172 PVFEPRFSPKSHAFRPGRNAHTVIRTIRSNFAGYLWFLKGDLTEILDRVDPNVVMRSLEK 231

Query: 181 DVRDKMIIDLLKSAL------VTPVVTTKVDDREPXXXXXXXXXXXRVLAEDEPKPDPYW 234
             RDK I+ L+KSAL      +  V   + +  E            R+  E+EP PDPYW
Sbjct: 232 GTRDKKILGLIKSALEGENEKLRDVSRKEENVEELRRLKKRRATKKRIWKENEPIPDPYW 291

Query: 235 LDTFFGFAPEEAEKVPKWGHCGVLSPLLANVCLDELDRWMEGKIKEFYVPSKSDVIWNSP 294
           L TFF FAPEEA K+P +GHCG+LSPLLANVCL+ELD WME KI EF+ P   D IW   
Sbjct: 292 LRTFFSFAPEEAAKLPDYGHCGILSPLLANVCLNELDHWMEEKIVEFFRPCAFDSIWKHS 351

Query: 295 EGQAEQGNTSWPEFVPTSGPDKTRKIDYIRYGGHILIGVRGPRADAATLRKQLIEFCDEK 354
                  N +WPEFVP+SG +KTRK+DY+R+GGH LIG+RGPR DAA LR++++ FC+  
Sbjct: 352 IDDGCH-NPAWPEFVPSSGREKTRKMDYVRFGGHFLIGIRGPREDAAELRRKIVAFCESV 410

Query: 355 LMLKLDNESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASL 414
             ++LDN  L IEH+T+GI FLDH +CRRV++PTLRYT +GG I+SEKGVGTLLSVTASL
Sbjct: 411 FGVRLDNSKLEIEHVTRGIQFLDHTICRRVIHPTLRYTGSGGNIVSEKGVGTLLSVTASL 470

Query: 415 KQCIRQFRKLMFLKGDRDPDPQPCFRMFHATQAHTNAQMNKFLATVVEWYRYADNRKKIV 474
           +QCIRQFR+L  +KGD+DP+P PC  M ++ QAHTN+QMNKFL T+ +WYRYADNRKKIV
Sbjct: 471 QQCIRQFRRLELVKGDKDPEPLPCNPMLYSGQAHTNSQMNKFLETMADWYRYADNRKKIV 530

Query: 475 NFCSYIIRGSLAKLYAAKYKLRSRAKVYKIGARNLSRPLKEKKGQS-PEYHNLLRMGLAE 533
            FC+Y++R SLAKLYAA+Y+L+SRAKVY I +RNLSRPL+E    S PEY +LLRMGL +
Sbjct: 531 GFCAYVVRSSLAKLYAARYRLKSRAKVYGIASRNLSRPLRESSNNSAPEYSDLLRMGLVD 590

Query: 534 SIDGLQFTRMSLVPETDYSPFPSNWRPDHEKSLLEYIKLEDPKTMEEQQNCIREQGLVTP 593
           +I+G+QF+ MSL+P  DY+PFP NW PDHE+ L EYIKLE+PK   E    ++ +GL  P
Sbjct: 591 AIEGVQFSHMSLIPSCDYTPFPRNWIPDHERVLHEYIKLENPKFFCELLRSVKRKGLSLP 650

Query: 594 QDYISMLVWNYK 605
           QD IS +VW+YK
Sbjct: 651 QDEISQMVWDYK 662


>Glyma13g28930.1 
          Length = 630

 Score =  530 bits (1364), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/612 (45%), Positives = 383/612 (62%), Gaps = 65/612 (10%)

Query: 1   MWIDNFRHPDRVVTNLSSSLRRFELWLLAYQKVLTDETGAYTPRSTIPRSQLEDLLALRN 60
           +W+  F       +NL+  L  F+LWLLAYQ+     TG + PR+ +    L    +LRN
Sbjct: 53  LWVKTFSS-----SNLTGFLSNFDLWLLAYQRSCAHATGTFPPRNAVHTPVLH---SLRN 104

Query: 61  AVLDGNFKWGARLKFHIKSPKDKTDYDSLSKRKIKIILTTTQPAPFQDKIVQEVLLMILE 120
           AV+   F+W  +     ++P D      LSKRK++  + + +P  FQD++VQE+LLMILE
Sbjct: 105 AVIRIRFEWNDKTNPLFRAPNDAAFSKPLSKRKLRAAIQSDKPC-FQDRVVQEILLMILE 163

Query: 121 PIYEARFSSKSFAFRPGRTPHPVLRVIRRSFAGYLWYIKGDLSTVLDGMKVGLVINAVMR 180
           P++E RFS              + RV  R+FAGYLW++KGDL+  LD +   +V+  + +
Sbjct: 164 PVFEPRFSPL------------IARVSTRNFAGYLWFLKGDLTEFLDRVDPNVVMRYLEK 211

Query: 181 DVRDKMIIDLLKSAL------VTPVVTTKVDDREPXXXXXXXXXXXRVLAEDEPKPDPYW 234
             RDK I+ L+KSAL      +  V   + +  E            R+L ++EPKPDPYW
Sbjct: 212 GTRDKKILGLIKSALDGENEKLRDVSLKEENVDELRRLKKRRATKKRILKDNEPKPDPYW 271

Query: 235 LDTFFGFAPEEAEKVPKWGHCGVLSPLLANVCLDELDRWMEGKIKEFYVPSKSDVIWNSP 294
           L TFF F+PEEA KVP +GHCG+LSPLLANVCL++      G+++              P
Sbjct: 272 LRTFFSFSPEEAAKVPDYGHCGILSPLLANVCLNDFS----GRVRLI------------P 315

Query: 295 EGQAEQGNTSWPEFVPTSGPDKTRKIDYIRYGGHILIGVRGPRADAATLRKQLIEFCDEK 354
            G           F+          +   R G  I++G   PR DAA LRK+++ FC+  
Sbjct: 316 YGSIR--------FITLHDQSLFHPVGEKRLGRWIMLG---PREDAAELRKKIVAFCESV 364

Query: 355 LMLKLDNESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASL 414
             ++LDN  L IEH+T+GI FLDH++CRRV++PT          ++EKGVGTLLSVTASL
Sbjct: 365 FGVRLDNSKLEIEHVTRGIQFLDHIICRRVIHPTY---------LAEKGVGTLLSVTASL 415

Query: 415 KQCIRQFRKLMFLKGDRDPDPQPCFRMFHATQAHTNAQMNKFLATVVEWYRYADNRKKIV 474
           +QCIR+FR+L  +KGD+DP+P PC  M ++ QAHTN QMNKFL T+ +WY YADNRKK+V
Sbjct: 416 QQCIREFRRLQLVKGDKDPEPLPCNPMLYSGQAHTNFQMNKFLETMADWYGYADNRKKVV 475

Query: 475 NFCSYIIRGSLAKLYAAKYKLRSRAKVYKIGARNLSRPLKEKKGQS-PEYHNLLRMGLAE 533
            FC+Y++R +LAKLYAA+Y+L+SRAKVY I +RNLSRPL+E    S PEY +LLRMGL +
Sbjct: 476 GFCAYVVRSTLAKLYAARYRLKSRAKVYGIASRNLSRPLRESSNNSAPEYSDLLRMGLVD 535

Query: 534 SIDGLQFTRMSLVPETDYSPFPSNWRPDHEKSLLEYIKLEDPKTMEEQQNCIREQGLVTP 593
           +I+G+QF+ MSL+P  DY+PFP NW PD E+ L EYIKLE+PK   E    + ++GL  P
Sbjct: 536 AIEGVQFSHMSLIPSCDYTPFPRNWIPD-ERVLHEYIKLENPKFFCELLRSVEQKGLSLP 594

Query: 594 QDYISMLVWNYK 605
           QD IS +V +YK
Sbjct: 595 QDEISQMVCDYK 606


>Glyma16g20740.1 
          Length = 289

 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 32/126 (25%)

Query: 1   MWIDNFRHPDRVVTNLSSSLRRFELWLLAYQKVLTDETGAYTPRSTIPRSQLEDLLALRN 60
           MWI+NF HP+  +TNLSS LR F+LW+L YQKV    TG+Y+  S++  S+     A+ +
Sbjct: 9   MWINNFYHPNHAITNLSSFLRCFDLWVLTYQKV---TTGSYSRCSSLYTSRTSSPSAMSS 65

Query: 61  AVLDGNFKWGARLKFHIKSPKDKTDYDSLSKRKIKIILTTTQPAPFQDKIVQEVLLMILE 120
           ++               K       ++S   RK               KI+ E+LLMILE
Sbjct: 66  SI--------------PKPKPSSPPHNSCHSRK---------------KIIHELLLMILE 96

Query: 121 PIYEAR 126
           PIYE R
Sbjct: 97  PIYELR 102