Miyakogusa Predicted Gene

Lj0g3v0323349.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0323349.1 Non Chatacterized Hit- tr|I1MAL1|I1MAL1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,51.52,0.00000000003,seg,NULL,CUFF.21952.1
         (118 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g33280.1                                                        70   7e-13

>Glyma14g33280.1 
          Length = 108

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 25  NRYLRPGALAKLRDSKV-SARRWAHRIXXXXXXXXXXXXXXXXXXFDQLPLNQDNGIPCF 83
           ++YL+PGALAKLRDSK+ S+R   +RI                      PLNQD G+PCF
Sbjct: 17  HKYLKPGALAKLRDSKITSSRHINNRITTQTSLSQLLLSPSSSPIQQNQPLNQDIGVPCF 76

Query: 84  A--VTANRRPSCLARKKLFAVTPFFT 107
              +  N RP CL RKKLFAVTP FT
Sbjct: 77  TPPIYLN-RPHCLVRKKLFAVTPSFT 101