Miyakogusa Predicted Gene

Lj0g3v0321829.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0321829.1 Non Chatacterized Hit- tr|J3L9B6|J3L9B6_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G1,44.68,5e-19,seg,NULL,CUFF.21820.1
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g05960.1                                                        72   1e-13

>Glyma02g05960.1 
          Length = 562

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 68  PIPARVLLDADAPPTFRALSDHIEVKXXXXXXXX--XXXXXXXXXQPSSRPLSMDSDVEN 125
           P+PA VL+D D+P  FR LSDHIEVK                    P   PL   SDV+ 
Sbjct: 66  PLPA-VLVDGDSPVAFRPLSDHIEVKLLLLLPVDHPILSALDLSQTPPPDPLDSQSDVKI 124

Query: 126 LSSHGEVDFYCRTCAFKLTK 145
           LSS GEVDFYCRTCAFKLT+
Sbjct: 125 LSSAGEVDFYCRTCAFKLTR 144