Miyakogusa Predicted Gene

Lj0g3v0320789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320789.1 tr|G7L8P4|G7L8P4_MEDTR Exosome complex
exonuclease OS=Medicago truncatula GN=MTR_8g073170 PE=3
SV=1,91.26,0,RIBONUCLEASE_II,Ribonuclease II/R, conserved site;
MITOTIC CONTROL PROTEIN DIS3,NULL; RIBONUCLEASE,N,CUFF.21741.1
         (366 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g14870.3                                                       709   0.0  
Glyma06g14870.2                                                       709   0.0  
Glyma06g14870.1                                                       709   0.0  
Glyma04g39980.1                                                       697   0.0  
Glyma13g02760.1                                                       149   4e-36
Glyma14g33170.2                                                       148   1e-35
Glyma14g33170.1                                                       148   1e-35

>Glyma06g14870.3 
          Length = 934

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/366 (93%), Positives = 355/366 (96%), Gaps = 1/366 (0%)

Query: 1   MTPEADIISSRYTKSVIKSCAALSYVEAQARMDDSRLMDPVTTDLRNMNSLAKKMRLRRI 60
           MTPEADIIS+RYTKSVIKS AALSYVEAQARMDDSRLMDP+T DLRNMNSLAKKMRLRRI
Sbjct: 570 MTPEADIISTRYTKSVIKSSAALSYVEAQARMDDSRLMDPITADLRNMNSLAKKMRLRRI 629

Query: 61  DNGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQILRSFPLC 120
           + GALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQIL SFPL 
Sbjct: 630 ERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQILNSFPLV 689

Query: 121 SLLRRHPIPTREMLEPFLRIATAVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRIMATR 180
           SLLRRHP PTREMLEP L+ A AVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRI+ATR
Sbjct: 690 SLLRRHPTPTREMLEPLLQTAAAVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRILATR 749

Query: 181 CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF 240
           CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF
Sbjct: 750 CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF 809

Query: 241 QDRLQLTSIADNLNYRHRNAQMAGRASIELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP 300
           QDRLQLTSIADNLNYRHRNAQ AGRAS+ELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP
Sbjct: 810 QDRLQLTSIADNLNYRHRNAQYAGRASVELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP 869

Query: 301 KYGIEGPVYLTTRAEKGNGDWYVDEQEQKIKKMDGSVSYSILQSVQIHMEVVEPQPNRPK 360
           KYGIEGPVYL T+AEKG+G+WYVD+Q+QKIKKMDGS+SYS+LQ+VQIHMEVVEPQPNRPK
Sbjct: 870 KYGIEGPVYL-TKAEKGSGEWYVDDQQQKIKKMDGSLSYSVLQTVQIHMEVVEPQPNRPK 928

Query: 361 LQLTLI 366
           LQLTLI
Sbjct: 929 LQLTLI 934


>Glyma06g14870.2 
          Length = 934

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/366 (93%), Positives = 355/366 (96%), Gaps = 1/366 (0%)

Query: 1   MTPEADIISSRYTKSVIKSCAALSYVEAQARMDDSRLMDPVTTDLRNMNSLAKKMRLRRI 60
           MTPEADIIS+RYTKSVIKS AALSYVEAQARMDDSRLMDP+T DLRNMNSLAKKMRLRRI
Sbjct: 570 MTPEADIISTRYTKSVIKSSAALSYVEAQARMDDSRLMDPITADLRNMNSLAKKMRLRRI 629

Query: 61  DNGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQILRSFPLC 120
           + GALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQIL SFPL 
Sbjct: 630 ERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQILNSFPLV 689

Query: 121 SLLRRHPIPTREMLEPFLRIATAVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRIMATR 180
           SLLRRHP PTREMLEP L+ A AVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRI+ATR
Sbjct: 690 SLLRRHPTPTREMLEPLLQTAAAVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRILATR 749

Query: 181 CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF 240
           CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF
Sbjct: 750 CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF 809

Query: 241 QDRLQLTSIADNLNYRHRNAQMAGRASIELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP 300
           QDRLQLTSIADNLNYRHRNAQ AGRAS+ELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP
Sbjct: 810 QDRLQLTSIADNLNYRHRNAQYAGRASVELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP 869

Query: 301 KYGIEGPVYLTTRAEKGNGDWYVDEQEQKIKKMDGSVSYSILQSVQIHMEVVEPQPNRPK 360
           KYGIEGPVYL T+AEKG+G+WYVD+Q+QKIKKMDGS+SYS+LQ+VQIHMEVVEPQPNRPK
Sbjct: 870 KYGIEGPVYL-TKAEKGSGEWYVDDQQQKIKKMDGSLSYSVLQTVQIHMEVVEPQPNRPK 928

Query: 361 LQLTLI 366
           LQLTLI
Sbjct: 929 LQLTLI 934


>Glyma06g14870.1 
          Length = 934

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/366 (93%), Positives = 355/366 (96%), Gaps = 1/366 (0%)

Query: 1   MTPEADIISSRYTKSVIKSCAALSYVEAQARMDDSRLMDPVTTDLRNMNSLAKKMRLRRI 60
           MTPEADIIS+RYTKSVIKS AALSYVEAQARMDDSRLMDP+T DLRNMNSLAKKMRLRRI
Sbjct: 570 MTPEADIISTRYTKSVIKSSAALSYVEAQARMDDSRLMDPITADLRNMNSLAKKMRLRRI 629

Query: 61  DNGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQILRSFPLC 120
           + GALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQIL SFPL 
Sbjct: 630 ERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQILNSFPLV 689

Query: 121 SLLRRHPIPTREMLEPFLRIATAVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRIMATR 180
           SLLRRHP PTREMLEP L+ A AVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRI+ATR
Sbjct: 690 SLLRRHPTPTREMLEPLLQTAAAVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRILATR 749

Query: 181 CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF 240
           CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF
Sbjct: 750 CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF 809

Query: 241 QDRLQLTSIADNLNYRHRNAQMAGRASIELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP 300
           QDRLQLTSIADNLNYRHRNAQ AGRAS+ELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP
Sbjct: 810 QDRLQLTSIADNLNYRHRNAQYAGRASVELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP 869

Query: 301 KYGIEGPVYLTTRAEKGNGDWYVDEQEQKIKKMDGSVSYSILQSVQIHMEVVEPQPNRPK 360
           KYGIEGPVYL T+AEKG+G+WYVD+Q+QKIKKMDGS+SYS+LQ+VQIHMEVVEPQPNRPK
Sbjct: 870 KYGIEGPVYL-TKAEKGSGEWYVDDQQQKIKKMDGSLSYSVLQTVQIHMEVVEPQPNRPK 928

Query: 361 LQLTLI 366
           LQLTLI
Sbjct: 929 LQLTLI 934


>Glyma04g39980.1 
          Length = 935

 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/367 (91%), Positives = 352/367 (95%), Gaps = 2/367 (0%)

Query: 1   MTPEADIISSRYTKSVIKSCAALSYVEAQARMDDSRLMDPVTTDLRNMNSLAKKMRLRRI 60
           MTPEADII++ YTKSVIKS AALSYVEAQARMDDSRLMDP+T DLRNMNSLAKKMRLRRI
Sbjct: 570 MTPEADIIATSYTKSVIKSSAALSYVEAQARMDDSRLMDPITADLRNMNSLAKKMRLRRI 629

Query: 61  DNGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQILRSFPLC 120
           + GALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQIL+SFPLC
Sbjct: 630 ERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQILKSFPLC 689

Query: 121 SLLRRHPIPTREMLEPFLRIATAVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRIMATR 180
           SLLRRHP PTREMLEP LR A AVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRI+ATR
Sbjct: 690 SLLRRHPTPTREMLEPLLRTAAAVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRILATR 749

Query: 181 CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYA-DVIVHRLLAASLGISKLPSV 239
           CMTQAVYFCSGDLSPPEYHHYGLAA LYTHFTSPIRRYA DVIVHRLLAASLGISKLP V
Sbjct: 750 CMTQAVYFCSGDLSPPEYHHYGLAALLYTHFTSPIRRYAVDVIVHRLLAASLGISKLPPV 809

Query: 240 FQDRLQLTSIADNLNYRHRNAQMAGRASIELHTLIYFRKRPTDTEARIVKIRSNGFFVFV 299
           FQD LQLTSIADNLNYRHRNAQ AGRAS+ELHTLIYFRKRPTDTE RIVKIRSNGFFVFV
Sbjct: 810 FQDSLQLTSIADNLNYRHRNAQYAGRASVELHTLIYFRKRPTDTEGRIVKIRSNGFFVFV 869

Query: 300 PKYGIEGPVYLTTRAEKGNGDWYVDEQEQKIKKMDGSVSYSILQSVQIHMEVVEPQPNRP 359
           PKYGIEGPVYL T+AEKG+G+WYVDEQ+QKIKKMDGS+SY++LQ+VQIHMEVVEPQPNRP
Sbjct: 870 PKYGIEGPVYL-TKAEKGSGEWYVDEQQQKIKKMDGSLSYNVLQTVQIHMEVVEPQPNRP 928

Query: 360 KLQLTLI 366
           KLQLTLI
Sbjct: 929 KLQLTLI 935


>Glyma13g02760.1 
          Length = 994

 Score =  149 bits (377), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 136/265 (51%), Gaps = 25/265 (9%)

Query: 5   ADIISSRYTKSVIKSCAALSYVEAQARMDDSRLMDP-------------------VTTDL 45
            D++     ++VI+SC  LSY  AQ  +D +   +                    V   L
Sbjct: 511 GDVVDRWIGRTVIQSCCKLSYEHAQDIIDKAFDFEGSNFIEDGYPRVYGHFEWPDVIMSL 570

Query: 46  RNMNSLAKKMRLRRIDNGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAA 105
            ++  ++  ++ +R  +GAL L + +V    D E   P D  + + +E+N +VEE+ML A
Sbjct: 571 ESLYEISNVLKQKRFTDGALRLENPKVVILFD-ENGVPYDSRLSERKESNFLVEEYMLLA 629

Query: 106 NVSVAQQILRSFPLCSLLRRHPIPTREMLEPFLRIATAVGLHLDVSSSKALADSLDH--- 162
           N   A+ I R++P  +LLRRHP P    L  F+      GL L+ SSS  L  SL+    
Sbjct: 630 NRIAAEVICRAYPDGALLRRHPEPNMRKLREFMAFCQKHGLELNTSSSGELHWSLEQIRE 689

Query: 163 AVGDDPYFNKLIRIMATRCMTQAVYFCSGDL--SPPEYHHYGLAAPLYTHFTSPIRRYAD 220
            +  DP    ++   ATR M  A YFCSGDL  S  E+ HY LA P YTHFTSP+RRY D
Sbjct: 690 KLKGDPVLYNILISYATRPMQLASYFCSGDLKDSENEWGHYALAVPFYTHFTSPLRRYPD 749

Query: 221 VIVHRLLAASLGISKLPSVFQDRLQ 245
           +IVHR L A++   +L    Q  LQ
Sbjct: 750 IIVHRTLLATIEAEELYMKHQKALQ 774


>Glyma14g33170.2 
          Length = 980

 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 135/265 (50%), Gaps = 25/265 (9%)

Query: 5   ADIISSRYTKSVIKSCAALSYVEAQARMDDSRLMDP-------------------VTTDL 45
            D++     ++VI SC  LSY  AQ  +D +   +                    V   L
Sbjct: 475 GDVVDRWIGRTVIHSCCKLSYEHAQDIIDKAFDFEGSNFSEDGYPRVYGHFEWPDVIKSL 534

Query: 46  RNMNSLAKKMRLRRIDNGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAA 105
           +++  ++  ++ +R  +GAL L + +V    D E   P D  + + +E+N +VEE+ML A
Sbjct: 535 KSLYEISNVLKQKRFTDGALRLENPKVVILFD-ENGVPYDSMLSERKESNFLVEEYMLLA 593

Query: 106 NVSVAQQILRSFPLCSLLRRHPIPTREMLEPFLRIATAVGLHLDVSSSKALADSLDH--- 162
           N   A+ I R++P  +LLRRHP P    L  F+      GL L+ SSS     SL+    
Sbjct: 594 NRIAAEVICRAYPDGALLRRHPEPNMRKLREFMAFCQKHGLELNTSSSGQFHWSLEQIRE 653

Query: 163 AVGDDPYFNKLIRIMATRCMTQAVYFCSGDL--SPPEYHHYGLAAPLYTHFTSPIRRYAD 220
            +  DP    ++   ATR M  A YFCSGDL  S  E+ HY LA P YTHFTSP+RRY D
Sbjct: 654 KLKGDPVLYNILISFATRPMQLASYFCSGDLKDSENEWGHYALAVPFYTHFTSPLRRYPD 713

Query: 221 VIVHRLLAASLGISKLPSVFQDRLQ 245
           +IVHR L A++   +L    Q  LQ
Sbjct: 714 IIVHRTLLATIEAEELYMKHQKALQ 738


>Glyma14g33170.1 
          Length = 1130

 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 135/265 (50%), Gaps = 25/265 (9%)

Query: 5   ADIISSRYTKSVIKSCAALSYVEAQARMDDSRLMDP-------------------VTTDL 45
            D++     ++VI SC  LSY  AQ  +D +   +                    V   L
Sbjct: 625 GDVVDRWIGRTVIHSCCKLSYEHAQDIIDKAFDFEGSNFSEDGYPRVYGHFEWPDVIKSL 684

Query: 46  RNMNSLAKKMRLRRIDNGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAA 105
           +++  ++  ++ +R  +GAL L + +V    D E   P D  + + +E+N +VEE+ML A
Sbjct: 685 KSLYEISNVLKQKRFTDGALRLENPKVVILFD-ENGVPYDSMLSERKESNFLVEEYMLLA 743

Query: 106 NVSVAQQILRSFPLCSLLRRHPIPTREMLEPFLRIATAVGLHLDVSSSKALADSLDH--- 162
           N   A+ I R++P  +LLRRHP P    L  F+      GL L+ SSS     SL+    
Sbjct: 744 NRIAAEVICRAYPDGALLRRHPEPNMRKLREFMAFCQKHGLELNTSSSGQFHWSLEQIRE 803

Query: 163 AVGDDPYFNKLIRIMATRCMTQAVYFCSGDL--SPPEYHHYGLAAPLYTHFTSPIRRYAD 220
            +  DP    ++   ATR M  A YFCSGDL  S  E+ HY LA P YTHFTSP+RRY D
Sbjct: 804 KLKGDPVLYNILISFATRPMQLASYFCSGDLKDSENEWGHYALAVPFYTHFTSPLRRYPD 863

Query: 221 VIVHRLLAASLGISKLPSVFQDRLQ 245
           +IVHR L A++   +L    Q  LQ
Sbjct: 864 IIVHRTLLATIEAEELYMKHQKALQ 888