Miyakogusa Predicted Gene

Lj0g3v0320469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320469.1 Non Chatacterized Hit- tr|G8A042|G8A042_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,42.64,6e-17,seg,NULL,CUFF.21719.1
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g15140.1                                                       108   1e-24
Glyma15g02340.1                                                       102   1e-22
Glyma15g02340.2                                                       102   1e-22
Glyma06g43080.1                                                        73   6e-14
Glyma0079s00270.1                                                      67   3e-12

>Glyma12g15140.1 
          Length = 196

 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/133 (52%), Positives = 83/133 (62%), Gaps = 16/133 (12%)

Query: 1   MDLPRSTLCQSVSAFAAVSLDEAVADLGELNWQECCVTSVETLXXXXXXXXXXXXXXXLP 60
           +DLPRST+ +S+SAFAAV+L++ V DLGELNWQECCVTSVE +                P
Sbjct: 76  VDLPRSTVQESMSAFAAVALEDVVVDLGELNWQECCVTSVEKI-------SFSNGQSVFP 128

Query: 61  TGVSSDQNLQLAIV---QSHAHRTKRMGEIYGGLVLEASRRSMPAKKMVPKRKRSTTY-S 116
            G S   N  L +V   QS A +  R+ E    L+ EA RRS+   KMVPKRKRS    S
Sbjct: 129 -GCS---NQSLHVVSHSQSQAQKENRIDET-RDLIPEAFRRSLKPTKMVPKRKRSNARDS 183

Query: 117 AASTVDSASLASC 129
            ASTVDSASLASC
Sbjct: 184 VASTVDSASLASC 196


>Glyma15g02340.1 
          Length = 235

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/131 (48%), Positives = 80/131 (61%), Gaps = 11/131 (8%)

Query: 1   MDLPRSTLCQSVSAFAAVSLDEAVADLGELNWQECCVTSVETLXXXXXXXXXXXXXXXLP 60
           +DLPRST+ +SVSAFAAV L++ VADLGEL+WQECCV SVE +                P
Sbjct: 114 VDLPRSTVSESVSAFAAVVLEDVVADLGELSWQECCVISVEKI-------SFSDGQSVFP 166

Query: 61  TGVSSDQNLQLAIVQ-SHAHRTKRMGEIYGGLVLEASRRSMPAKKMVPKRKRSTTYS-AA 118
               SDQ+L++     S A +  R+ E    L+ EA R+ +   KMVPKRKRS      A
Sbjct: 167 AAC-SDQSLRVVNHSLSQAQKENRIDET-RNLIPEAFRKDLKPTKMVPKRKRSNVRDYVA 224

Query: 119 STVDSASLASC 129
           ST+DSASLASC
Sbjct: 225 STLDSASLASC 235


>Glyma15g02340.2 
          Length = 200

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/131 (48%), Positives = 80/131 (61%), Gaps = 11/131 (8%)

Query: 1   MDLPRSTLCQSVSAFAAVSLDEAVADLGELNWQECCVTSVETLXXXXXXXXXXXXXXXLP 60
           +DLPRST+ +SVSAFAAV L++ VADLGEL+WQECCV SVE +                P
Sbjct: 79  VDLPRSTVSESVSAFAAVVLEDVVADLGELSWQECCVISVEKI-------SFSDGQSVFP 131

Query: 61  TGVSSDQNLQLAIVQ-SHAHRTKRMGEIYGGLVLEASRRSMPAKKMVPKRKRSTTYS-AA 118
               SDQ+L++     S A +  R+ E    L+ EA R+ +   KMVPKRKRS      A
Sbjct: 132 AAC-SDQSLRVVNHSLSQAQKENRIDET-RNLIPEAFRKDLKPTKMVPKRKRSNVRDYVA 189

Query: 119 STVDSASLASC 129
           ST+DSASLASC
Sbjct: 190 STLDSASLASC 200


>Glyma06g43080.1 
          Length = 105

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 40/43 (93%)

Query: 1  MDLPRSTLCQSVSAFAAVSLDEAVADLGELNWQECCVTSVETL 43
          +DLPRST+ +SVSAFAAV+L++ VADLGEL+WQECCVTSVE +
Sbjct: 34 VDLPRSTVSESVSAFAAVALEDVVADLGELSWQECCVTSVEKI 76


>Glyma0079s00270.1 
          Length = 160

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/43 (67%), Positives = 38/43 (88%)

Query: 1   MDLPRSTLCQSVSAFAAVSLDEAVADLGELNWQECCVTSVETL 43
           +DLP+S + +SVSAFAAV+L++ V DLGEL+WQECCVTSVE +
Sbjct: 79  VDLPQSKVSESVSAFAAVALEDVVGDLGELSWQECCVTSVEKI 121