Miyakogusa Predicted Gene

Lj0g3v0320459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320459.1 Non Chatacterized Hit- tr|I3SV88|I3SV88_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,58.49,0.000000001, ,CUFF.21717.1
         (53 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g04140.1                                                        62   1e-10
Glyma17g14610.1                                                        61   3e-10
Glyma01g27110.1                                                        51   2e-07
Glyma03g14790.1                                                        49   1e-06
Glyma11g34800.1                                                        49   1e-06
Glyma02g42090.1                                                        46   1e-05
Glyma14g06810.1                                                        46   1e-05

>Glyma05g04140.1 
          Length = 354

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 39/53 (73%)

Query: 1   MVQAIIMMTELDKFSSMNLLLYMALMATMILFSSTFYIEGNLVSVTFEKTRSD 53
           +VQ I++ +E +K  SMNLLLYMA +A MIL   T YIEGN++++T EK + D
Sbjct: 216 VVQGILLTSEAEKLHSMNLLLYMAPLAAMILLPFTLYIEGNVLALTIEKAKGD 268


>Glyma17g14610.1 
          Length = 355

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 39/53 (73%)

Query: 1   MVQAIIMMTELDKFSSMNLLLYMALMATMILFSSTFYIEGNLVSVTFEKTRSD 53
           +VQ I++ +E +K  SMNLLLYMA +A +IL   T YIEGN++++T EK + D
Sbjct: 217 VVQGILLTSEAEKLHSMNLLLYMAPLAALILLPFTLYIEGNVLALTVEKAKGD 269


>Glyma01g27110.1 
          Length = 296

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 38/53 (71%)

Query: 1   MVQAIIMMTELDKFSSMNLLLYMALMATMILFSSTFYIEGNLVSVTFEKTRSD 53
           ++Q I++ +E +K +SMNLLLYMA +A M+L  +T  +EGN++ +T +  R D
Sbjct: 164 VLQDILLSSEGEKLNSMNLLLYMAPIAVMVLLPATLLMEGNVIQITMDLARKD 216


>Glyma03g14790.1 
          Length = 309

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 37/53 (69%)

Query: 1   MVQAIIMMTELDKFSSMNLLLYMALMATMILFSSTFYIEGNLVSVTFEKTRSD 53
           ++Q I++ +E +K +SMNLLLYMA +A M+L  +   +EGN++ +T +  R D
Sbjct: 173 VLQDILLSSEGEKLNSMNLLLYMAPIAVMVLLPTILLMEGNVIQITMDLARKD 225


>Glyma11g34800.1 
          Length = 257

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 35/53 (66%)

Query: 1   MVQAIIMMTELDKFSSMNLLLYMALMATMILFSSTFYIEGNLVSVTFEKTRSD 53
           ++Q I++ +E +K +SMNLLLYMA MA + L  +T  +E N+V +T    R D
Sbjct: 123 VLQGILLASEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDD 175


>Glyma02g42090.1 
          Length = 306

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%)

Query: 1   MVQAIIMMTELDKFSSMNLLLYMALMATMILFSSTFYIEGNLVSVTFEKTRSD 53
           ++Q I++ +E +K +SMNLLLYMA +A + L  +T  +E N+V +T    R D
Sbjct: 172 VLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVVGITLALARDD 224


>Glyma14g06810.1 
          Length = 306

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%)

Query: 1   MVQAIIMMTELDKFSSMNLLLYMALMATMILFSSTFYIEGNLVSVTFEKTRSD 53
           ++Q I++ +E +K +SMNLLLYMA +A + L  +T  +E N+V +T    R D
Sbjct: 172 VLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVVGITLALARDD 224