Miyakogusa Predicted Gene

Lj0g3v0320169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320169.1 Non Chatacterized Hit- tr|I1J4S4|I1J4S4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23968
PE,56.76,4e-19,seg,NULL,CUFF.21696.1
         (110 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g01910.2                                                        50   6e-07
Glyma01g01910.1                                                        50   7e-07

>Glyma01g01910.2 
          Length = 269

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 1   MALLSSATHRIPFIFSQNPNPKPXXXXXXXXXXXXXPNPLRFPSIRFXXXXXXXXXXX-- 58
           MALL+  T R PF+FS  PNPKP             P   RFPS+RF             
Sbjct: 18  MALLA-VTSRAPFLFS--PNPKPLSPSSFYSHLSLSPRSPRFPSLRFRSATGDASDAGKP 74

Query: 59  XXXXXXEWGXXXXXXXXXXXXXKLPDVDPPKDEDEW 94
                 EWG             KLPD DPPKDEDEW
Sbjct: 75  AGKISDEWGEDYDPEAEALTS-KLPDSDPPKDEDEW 109


>Glyma01g01910.1 
          Length = 370

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 1   MALLSSATHRIPFIFSQNPNPKPXXXXXXXXXXXXXPNPLRFPSIRFXXXXXXXXXXX-- 58
           MALL+  T R PF+FS  PNPKP             P   RFPS+RF             
Sbjct: 18  MALLA-VTSRAPFLFS--PNPKPLSPSSFYSHLSLSPRSPRFPSLRFRSATGDASDAGKP 74

Query: 59  XXXXXXEWGXXXXXXXXXXXXXKLPDVDPPKDEDEW 94
                 EWG             KLPD DPPKDEDEW
Sbjct: 75  AGKISDEWGEDYDPEAEALTS-KLPDSDPPKDEDEW 109