Miyakogusa Predicted Gene

Lj0g3v0319409.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0319409.1 Non Chatacterized Hit- tr|G7ZZG9|G7ZZG9_MEDTR
Calcium-binding protein, putative OS=Medicago truncatu,88,0.00002,
,CUFF.21639.1
         (49 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g05340.2                                                        54   4e-08
Glyma16g01890.2                                                        52   1e-07
Glyma16g01890.1                                                        52   1e-07

>Glyma07g05340.2 
          Length = 477

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/26 (84%), Positives = 24/26 (92%)

Query: 24  GFDSSYDIANKYTDSYADAHKWFSHR 49
           GF SSYDIAN+Y+DSYADAHKW SHR
Sbjct: 263 GFVSSYDIANRYSDSYADAHKWVSHR 288


>Glyma16g01890.2 
          Length = 452

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/26 (80%), Positives = 24/26 (92%)

Query: 24  GFDSSYDIANKYTDSYADAHKWFSHR 49
           GF SSYDIAN+Y+DSYAD+HKW SHR
Sbjct: 239 GFVSSYDIANQYSDSYADSHKWVSHR 264


>Glyma16g01890.1 
          Length = 453

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/26 (80%), Positives = 24/26 (92%)

Query: 24  GFDSSYDIANKYTDSYADAHKWFSHR 49
           GF SSYDIAN+Y+DSYAD+HKW SHR
Sbjct: 239 GFVSSYDIANQYSDSYADSHKWVSHR 264