Miyakogusa Predicted Gene

Lj0g3v0319299.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0319299.1 tr|A8HNS4|A8HNS4_CHLRE Peroxisomal targeting
signal 1 receptor OS=Chlamydomonas reinhardtii GN=PEX5
,30.61,0.0000000000001,seg,NULL,CUFF.21651.1
         (279 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g47820.2                                                       403   e-112

>Glyma06g47820.2 
          Length = 1402

 Score =  403 bits (1036), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/281 (72%), Positives = 223/281 (79%), Gaps = 9/281 (3%)

Query: 1   MAMRDLITGATACPDPXXXXXXXNPLGALANVLVGSSSKTQERLKEIPTSTPTGPASQFY 60
           MAMRDL++GA AC D        NPL +LAN L+GSSSKTQERLKEIPTSTPT PASQFY
Sbjct: 1   MAMRDLVSGAAACGDSSSSSS--NPLASLANALIGSSSKTQERLKEIPTSTPTDPASQFY 58

Query: 61  SQ--PPLQLPGSEFDKPFLDSNSQGSAFLNSFRSAGAGGLEETWDEIQREGRVGQPYGRV 118
           S   P  QLPGSEFDKP L+ NSQ S FL+ FR  G+ GLEETWDEIQR+G   Q   ++
Sbjct: 59  STALPANQLPGSEFDKPLLNLNSQASEFLHRFR--GSTGLEETWDEIQRDGAAAQ-MRQL 115

Query: 119 PPPQQLHQPALDGTPQRVXXXXXXXXXXXXRGGIPFHPAPLPMLGLSEGDKQCIRDRSSI 178
           PP   + QP LDGTPQRV            RGG+PFHPAPLPMLGLSEGDKQCIRDRSSI
Sbjct: 116 PPG--IQQPPLDGTPQRVLSNILHSFLDSSRGGVPFHPAPLPMLGLSEGDKQCIRDRSSI 173

Query: 179 MARHLFADKNEEFINAQVNALLCSLDIDSNVRGKGPMPERLRELEDYWNESQGNRRLGAH 238
           MARHLF DK+EEFI+AQVNALLCSLDIDS+VRGKGPMPER RELEDYWNESQGN RLG  
Sbjct: 174 MARHLFVDKSEEFIDAQVNALLCSLDIDSSVRGKGPMPERFRELEDYWNESQGNLRLGPP 233

Query: 239 PADGWITEFSQNRERHDNPDSWANSFEQQHGANGWASEFEH 279
             DGWI+EFSQ RE++DNPDSWANSFEQQ+GANGW SEFEH
Sbjct: 234 APDGWISEFSQQREKYDNPDSWANSFEQQYGANGWVSEFEH 274