Miyakogusa Predicted Gene

Lj0g3v0318859.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318859.1 Non Chatacterized Hit- tr|D8SUQ7|D8SUQ7_SELML
Putative uncharacterized protein OS=Selaginella
moelle,37.2,1e-17,A_DEAMIN_EDITASE,Adenosine deaminase/editase; RNA
BINDING / ADENOSINE DEAMINASE,NULL; EUKARYOTE SPEC,CUFF.21593.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g07990.1                                                       273   5e-74
Glyma03g01570.1                                                       248   2e-66

>Glyma07g07990.1 
          Length = 433

 Score =  273 bits (698), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 130/161 (80%), Positives = 142/161 (88%)

Query: 5   FKFEDNLKRALYDHIRSMSNELTSPFLVSQPLFQAAPVPPKDFQQSESAANTLTCGYSIC 64
           F+ EDNLKRALY+ I  + NELTSPFLV+QP+F AAPVPPKDFQQSESAANTLTCGYSI 
Sbjct: 273 FRLEDNLKRALYERIPPLLNELTSPFLVNQPIFHAAPVPPKDFQQSESAANTLTCGYSIG 332

Query: 65  WNGCGLHEVILGTTGRKQGTSAKGALYPSSESSLCKKRLLEVFLSLRQGCLTTCLEKGIT 124
           WN CGLH++I+GTTGRKQGTSAKGALYPS++SSLCKKRLLEVFLSLR   L + L  GIT
Sbjct: 333 WNECGLHDIIMGTTGRKQGTSAKGALYPSTQSSLCKKRLLEVFLSLRPENLISSLPNGIT 392

Query: 125 YRELKDGAEEYHLASKFFKGKPPFSNWFLKPLDCETFPISE 165
           YRELKDGAEEYHLASK FKGKPPF+ WFLKPLDCE F ISE
Sbjct: 393 YRELKDGAEEYHLASKIFKGKPPFNKWFLKPLDCEAFHISE 433


>Glyma03g01570.1 
          Length = 414

 Score =  248 bits (634), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 126/179 (70%), Positives = 140/179 (78%), Gaps = 14/179 (7%)

Query: 1   MLLVFKFEDNLKRALYDHIRSMSNELTSPFLVSQPLFQAAPVPPKDFQQSESAANTLTCG 60
           +L  F+ ED+LKRALY+ +  +SNELTSPFLV+QP+F AAPVPPKDFQQSESAANTLTCG
Sbjct: 236 ILENFRLEDSLKRALYERMLPLSNELTSPFLVNQPIFHAAPVPPKDFQQSESAANTLTCG 295

Query: 61  YSICWNGCGLHEVILGTTGRKQGTSAKGALYPSSESSLCKKRLLEVFLSLRQGCLTTCLE 120
           YSICWN CGLH+VI+GTTGRKQGTSAKGALYPS++SSLCKKRLLEVFLSL    L   L 
Sbjct: 296 YSICWNECGLHDVIMGTTGRKQGTSAKGALYPSTQSSLCKKRLLEVFLSLGPENLIGSLP 355

Query: 121 KGITYRELKDG--------------AEEYHLASKFFKGKPPFSNWFLKPLDCETFPISE 165
            GITYRELK                +EEYHLASK FK K  F+ WFLKPLDCE FPISE
Sbjct: 356 NGITYRELKAVLWAVMDLNYYLCIISEEYHLASKIFKRKASFNKWFLKPLDCEAFPISE 414