Miyakogusa Predicted Gene

Lj0g3v0318709.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318709.1 Non Chatacterized Hit- tr|I1KS47|I1KS47_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56996
PE,82.91,0,seg,NULL; RIBOSOMAL_S19,Ribosomal protein S19 conserved
site; RIBOSOMALS19,Ribosomal protein S19/S15,CUFF.21575.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g11250.1                                                       172   1e-43
Glyma05g28270.1                                                       171   1e-43

>Glyma08g11250.1 
          Length = 127

 Score =  172 bits (435), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/117 (71%), Positives = 94/117 (80%), Gaps = 2/117 (1%)

Query: 1   MRPTPMLRAISQQFLGIFGDTANAVXXXXXXXXXXXXX--XFIDAFLYKMKKNKDLLTNK 58
           MRPT MLRA+++QFLGI GDTAN V                FIDAFLYKMKKN +LL NK
Sbjct: 1   MRPTMMLRALTKQFLGIVGDTANTVAKKPPPPPPLVSRKPAFIDAFLYKMKKNPNLLLNK 60

Query: 59  TIWSRRSTILPEFVDTTVKIYNGKTTVRCKITEGKVGHKFGEFALTRKRKVKEHSNT 115
           TIWSRRSTILPEFVD+TVKIYNGKTT+RC+ITEGKVGHKFGEFALTRKRK +E +N+
Sbjct: 61  TIWSRRSTILPEFVDSTVKIYNGKTTIRCRITEGKVGHKFGEFALTRKRKTREQANS 117


>Glyma05g28270.1 
          Length = 127

 Score =  171 bits (434), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/116 (72%), Positives = 93/116 (80%), Gaps = 2/116 (1%)

Query: 1   MRPTPMLRAISQQFLGIFGDTANAVXXXXXXXXXXXXX--XFIDAFLYKMKKNKDLLTNK 58
           MRPT MLRA+++QFLGI GD AN V                FIDAFLYKMKKN +LL+NK
Sbjct: 1   MRPTMMLRALTKQFLGIVGDAANTVAKKPPLPPPLVSRKPAFIDAFLYKMKKNPNLLSNK 60

Query: 59  TIWSRRSTILPEFVDTTVKIYNGKTTVRCKITEGKVGHKFGEFALTRKRKVKEHSN 114
           TIWSRRSTILPEFVDTTVKIYNGKTT+RC+ITEGKVGHKFGEFALTRKRK +E +N
Sbjct: 61  TIWSRRSTILPEFVDTTVKIYNGKTTIRCRITEGKVGHKFGEFALTRKRKTREQAN 116