Miyakogusa Predicted Gene

Lj0g3v0318559.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318559.1 Non Chatacterized Hit- tr|I3SWD9|I3SWD9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,DYNEIN_LIGHT_1,Dynein light chain, type 1/2, conserved
site; no description,Dynein light chain, type,CUFF.21564.1
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g16050.1                                                       183   5e-47
Glyma09g04830.1                                                       182   9e-47
Glyma15g16060.1                                                       182   1e-46
Glyma09g04820.1                                                       126   7e-30
Glyma15g16060.2                                                       125   2e-29
Glyma06g42180.1                                                        92   2e-19
Glyma17g10320.1                                                        85   3e-17
Glyma05g01580.1                                                        83   1e-16
Glyma17g12490.1                                                        80   6e-16
Glyma02g07720.1                                                        78   4e-15
Glyma16g26790.1                                                        77   4e-15
Glyma13g09990.1                                                        75   2e-14
Glyma05g34910.1                                                        75   2e-14
Glyma08g04800.1                                                        75   3e-14
Glyma08g04230.1                                                        74   4e-14
Glyma12g35200.1                                                        73   1e-13
Glyma13g43410.1                                                        72   1e-13
Glyma15g01900.1                                                        72   1e-13
Glyma08g00340.1                                                        68   3e-12
Glyma13g35300.1                                                        68   4e-12
Glyma07g16690.1                                                        64   7e-11
Glyma12g16250.1                                                        54   4e-08

>Glyma15g16050.1 
          Length = 122

 Score =  183 bits (465), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 91/118 (77%), Positives = 95/118 (80%), Gaps = 8/118 (6%)

Query: 25  LTARPNSEDRKXXXXXXXXXXXXXXXXXXXXXKKVIIKSADMLPDMQKEAVDIAVAAFER 84
           LTARPNS+D+K                     KKVIIKSADM+PDMQKEAVDIAVAAFE+
Sbjct: 13  LTARPNSDDQKLSPLPSPAPAVPP--------KKVIIKSADMIPDMQKEAVDIAVAAFEK 64

Query: 85  LNVEKDVAEHIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 142
            NVEKDVAE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 65  YNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 122


>Glyma09g04830.1 
          Length = 122

 Score =  182 bits (462), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 91/118 (77%), Positives = 95/118 (80%), Gaps = 8/118 (6%)

Query: 25  LTARPNSEDRKXXXXXXXXXXXXXXXXXXXXXKKVIIKSADMLPDMQKEAVDIAVAAFER 84
           LTARPNS+D+K                     KKVIIKSADM+PDMQKEAVDIAVAAFE+
Sbjct: 13  LTARPNSDDQKPSPLPSPAPAVPP--------KKVIIKSADMIPDMQKEAVDIAVAAFEK 64

Query: 85  LNVEKDVAEHIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 142
            NVEKDVAE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 65  YNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 122


>Glyma15g16060.1 
          Length = 118

 Score =  182 bits (462), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 91/118 (77%), Positives = 94/118 (79%), Gaps = 12/118 (10%)

Query: 25  LTARPNSEDRKXXXXXXXXXXXXXXXXXXXXXKKVIIKSADMLPDMQKEAVDIAVAAFER 84
           LTARP S+D+K                     KKVIIKSADM+PDMQKEAVDIAVAAFER
Sbjct: 13  LTARPTSDDQKQAPALNVPP------------KKVIIKSADMIPDMQKEAVDIAVAAFER 60

Query: 85  LNVEKDVAEHIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 142
            NVEKDVAE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  YNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118


>Glyma09g04820.1 
          Length = 121

 Score =  126 bits (317), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 80/120 (66%), Gaps = 14/120 (11%)

Query: 25  LTARPNSEDRKXXXXXXXXXXXXXXXXXXXXXKKVIIKSADMLPDMQKEAVDIAVAAFER 84
           LTARPNS++ K                     KKVIIKSADM+PDMQKEAVDIAVAAFE+
Sbjct: 13  LTARPNSDEPKPAPVPAVPP------------KKVIIKSADMIPDMQKEAVDIAVAAFEK 60

Query: 85  LNVEKDVAEHIKKEFDKRHGPTWHCIVGRNFGSYVTH--ETNHFVYFYLDQKAVLLFKSG 142
            NVEKDVAE IKKEFDKRHGPTWHCIVGRNFG++       + F + Y D   + LF SG
Sbjct: 61  YNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGNFFLFIIVNDFFTWVYSDLWFISLFSSG 120


>Glyma15g16060.2 
          Length = 107

 Score =  125 bits (313), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/108 (62%), Positives = 72/108 (66%), Gaps = 14/108 (12%)

Query: 25  LTARPNSEDRKXXXXXXXXXXXXXXXXXXXXXKKVIIKSADMLPDMQKEAVDIAVAAFER 84
           LTARP S+D+K                     KKVIIKSADM+PDMQKEAVDIAVAAFER
Sbjct: 13  LTARPTSDDQKQAPALNVPP------------KKVIIKSADMIPDMQKEAVDIAVAAFER 60

Query: 85  LNVEKDVAEHIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLD 132
            NVEKDVAE IKKEFDKRHGPTWHCIVGRNF    T  +  F  F  D
Sbjct: 61  YNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFVHSCT--SLAFCRFICD 106


>Glyma06g42180.1 
          Length = 109

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 58  KVIIKSADMLPDMQKEAVDIAVAAFERLNVEK--DVAEHIKKEFDKRHGPTWHCIVGRNF 115
           K +I   DML  MQ++A+D+A  A +  +V +   +A  IKKEFD+ HGP W CIVG +F
Sbjct: 5   KAVIGETDMLQTMQQDAMDLASKALDFFDVTEAIKIARFIKKEFDRMHGPGWQCIVGTDF 64

Query: 116 GSYVTHETNHFVYFYLDQKAVLLFKS 141
           GS+VTH    F+YF L   A+LLF+ 
Sbjct: 65  GSFVTHCCGCFIYFCLGNLAILLFRG 90


>Glyma17g10320.1 
          Length = 259

 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 63  SADMLPDMQKEAVDIAVAAFERLN--VEKDVAEHIKKEFDKRHGPTWHCIVGRNFGSYVT 120
           S DM P MQ  AVD A  A + +     K +A  +KKEFD  +GP WHCIVG +FGS+VT
Sbjct: 172 SVDMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVT 231

Query: 121 HETNHFVYFYLDQKA-VLLFKSG 142
           H    F+YF +DQK  +LLFK+ 
Sbjct: 232 HSVGGFLYFSMDQKLYILLFKTA 254


>Glyma05g01580.1 
          Length = 246

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 63  SADMLPDMQKEAVDIAVAAFERLN--VEKDVAEHIKKEFDKRHGPTWHCIVGRNFGSYVT 120
           S DM P MQ  AVD A  A + +     K +A  +KKEFD  +GP WHCIVG +FGS+VT
Sbjct: 159 SVDMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVT 218

Query: 121 HETNHFVYFYLDQKA-VLLFKSG 142
           H    F+YF +D+K  +LLFK+ 
Sbjct: 219 HSVGGFLYFSMDKKLYILLFKTA 241


>Glyma17g12490.1 
          Length = 176

 Score = 80.5 bits (197), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 2/86 (2%)

Query: 58  KVIIKSADMLPDMQKEAVDIAVAAFERLN--VEKDVAEHIKKEFDKRHGPTWHCIVGRNF 115
           +V +  +DM   MQ  A   A   ++ L     K +A +IKKEFDK +GP WHCIVG NF
Sbjct: 84  QVKVLVSDMPTFMQVHAFRCARRTYDSLEKFSAKLIAHNIKKEFDKAYGPVWHCIVGSNF 143

Query: 116 GSYVTHETNHFVYFYLDQKAVLLFKS 141
           GS+VTH T  F+YF ++   +LLFK+
Sbjct: 144 GSFVTHSTGCFLYFSMENLYILLFKT 169


>Glyma02g07720.1 
          Length = 133

 Score = 77.8 bits (190), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 58  KVIIKSADMLPDMQKEAVDIAVAAFERLNV-----EKDVAEHIKKEFDKRHGPTWHCIVG 112
           KV +++ DM   +Q  A   A    E +        K +A  +KKEFD  +GP WHCIVG
Sbjct: 38  KVDVRACDMPLPLQNRAFQCARLYLESMPPANKLDSKRLALALKKEFDSSYGPAWHCIVG 97

Query: 113 RNFGSYVTHETNHFVYFYLDQKAVLLFKSG 142
            +FGSYVTH    F+YF +D+  +LLFK+ 
Sbjct: 98  TSFGSYVTHSVGGFLYFSIDKVYILLFKTA 127


>Glyma16g26790.1 
          Length = 130

 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 5/90 (5%)

Query: 58  KVIIKSADMLPDMQKEAVDIAVAAFERLNV-----EKDVAEHIKKEFDKRHGPTWHCIVG 112
           KV +++ DM   +Q  A+  A    E +        K +A  +KKEFD  +GP WHCIVG
Sbjct: 35  KVHVRACDMPLPLQNRALQCARLHLESMPPGNKLDNKRLALALKKEFDSSYGPAWHCIVG 94

Query: 113 RNFGSYVTHETNHFVYFYLDQKAVLLFKSG 142
            +FGSYVTH    F+YF +D+  +LLFK+ 
Sbjct: 95  TSFGSYVTHSVGGFLYFSIDKVYILLFKTA 124


>Glyma13g09990.1 
          Length = 59

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/50 (72%), Positives = 40/50 (80%), Gaps = 5/50 (10%)

Query: 72  KEAVDI-----AVAAFERLNVEKDVAEHIKKEFDKRHGPTWHCIVGRNFG 116
           K+AV+I      + AFE+ NVEKDVAE IKKEFDKRH PTWHCIVGRNFG
Sbjct: 6   KKAVEIENLPQIIQAFEKYNVEKDVAEQIKKEFDKRHEPTWHCIVGRNFG 55


>Glyma05g34910.1 
          Length = 133

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 4/88 (4%)

Query: 59  VIIKSADMLPDMQKEAVDIAVAAFERLNVEK----DVAEHIKKEFDKRHGPTWHCIVGRN 114
           V +++ DM   +Q  A   A    + +  +K     +A  +KKEFD  +GP WHCIVG +
Sbjct: 39  VRVRACDMPLPLQSRAFRCARDLLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGTS 98

Query: 115 FGSYVTHETNHFVYFYLDQKAVLLFKSG 142
           FGSYVTH    FVYF +D+  VLLFK+ 
Sbjct: 99  FGSYVTHSLGGFVYFSIDKVYVLLFKTA 126


>Glyma08g04800.1 
          Length = 133

 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 4/88 (4%)

Query: 59  VIIKSADMLPDMQKEAVDIAVAAFERLNVEK----DVAEHIKKEFDKRHGPTWHCIVGRN 114
           V +++ DM   +Q  A   A    + +  +K     +A  +KKEFD  +GP WHCIVG +
Sbjct: 39  VRVRACDMPLPLQNRAFRCARDLLDSMPSKKLDSKRLALTLKKEFDTSYGPAWHCIVGTS 98

Query: 115 FGSYVTHETNHFVYFYLDQKAVLLFKSG 142
           FGSYVTH    FVYF +D+  VLLFK+ 
Sbjct: 99  FGSYVTHSFGGFVYFSIDKVYVLLFKTA 126


>Glyma08g04230.1 
          Length = 93

 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 58  KVIIKSADMLPDMQKEAVDIAVAAFERLNVEK--DVAEHIKKEFDKRHGPTWHCIVGRNF 115
           K ++K  DM   MQ  A+  A  A +  +V     +A HIKKEFD  +G  W C+VG NF
Sbjct: 5   KAMVKETDMSTKMQIHAMASASQALDLYDVYDCISIAAHIKKEFDSVYGNGWQCVVGSNF 64

Query: 116 GSYVTHETNHFVYFYLDQKAVLLFK 140
           G Y TH +  F+YF L     L+FK
Sbjct: 65  GCYFTHSSGTFIYFALATLNFLIFK 89


>Glyma12g35200.1 
          Length = 152

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 6/89 (6%)

Query: 59  VIIKSADMLPDMQKEAVDIAVAAFERLNVEKD------VAEHIKKEFDKRHGPTWHCIVG 112
           V +KS+DM   MQ+ A+    + F   +          +A  +KKEFD ++G  WHC++G
Sbjct: 53  VRLKSSDMPSHMQEHALRHTRSLFPLHHPPSPKPSNTLIARALKKEFDSKYGLAWHCVIG 112

Query: 113 RNFGSYVTHETNHFVYFYLDQKAVLLFKS 141
           ++FGS+V+H    F+YF +D  +VLLFK+
Sbjct: 113 KSFGSFVSHTGGGFIYFSIDSLSVLLFKT 141


>Glyma13g43410.1 
          Length = 95

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 58  KVIIKSADMLPDMQKEAVDIAVAAFERLNV--EKDVAEHIKKEFDKRHGPTWHCIVGRNF 115
           K +I+  DM   MQ +A+  A  A +  +V     +A HIKKEFD ++G  W C+VG +F
Sbjct: 5   KAVIEDTDMPDKMQIQAMASAYEALDLYDVFDCTSIAAHIKKEFDTKYGSGWQCVVGSSF 64

Query: 116 GSYVTHETNHFVYFYLDQKAVLLFKS 141
           G + TH    FVYF L+    L+FK 
Sbjct: 65  GCFFTHSKGTFVYFTLETLNFLIFKG 90


>Glyma15g01900.1 
          Length = 95

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 58  KVIIKSADMLPDMQKEAVDIAVAAFERLNV--EKDVAEHIKKEFDKRHGPTWHCIVGRNF 115
           K +I+  DM   MQ +A+  A  A +  +V     +A HIKKEFD ++G  W C+VG +F
Sbjct: 5   KAVIEDTDMPDKMQIQAMASASEALDLYDVFDCTSIAAHIKKEFDTKYGSGWQCVVGSSF 64

Query: 116 GSYVTHETNHFVYFYLDQKAVLLFKS 141
           G + TH    FVYF L+    L+FK 
Sbjct: 65  GCFFTHSKGTFVYFTLETLNFLIFKG 90


>Glyma08g00340.1 
          Length = 60

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 35/45 (77%)

Query: 97  KEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKS 141
           +EFDK +GP WHCIVG NFGS+VTH T  F+YF ++   +LLFK+
Sbjct: 9   QEFDKAYGPVWHCIVGSNFGSFVTHSTGCFLYFSMENLYILLFKT 53


>Glyma13g35300.1 
          Length = 142

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 38/51 (74%)

Query: 91  VAEHIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKS 141
           +A  +KKEFD ++G  WHC++G +FGS+V+H    F+YF +D  +VLLFK+
Sbjct: 81  IARALKKEFDSKYGLAWHCVIGNSFGSFVSHTGGGFIYFSIDSLSVLLFKT 131


>Glyma07g16690.1 
          Length = 130

 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 58  KVIIKSADMLPDMQKEAVDIAVAAFERLNVE--KDVAEHIKKEFDKRHGPTWHCIVGRNF 115
           K +++  DM   MQ   +++A  A +   V   + +A  IK++ D+ +GP W+ +VG++F
Sbjct: 23  KAVVRETDMPEGMQSYVMELAHQALDAHEVSDCQSIAHFIKQKLDEAYGPAWNSVVGKDF 82

Query: 116 GSYVTHETNHFVYFYLDQKAVLLFKSG 142
           GS +TH    F++F ++    L+FK G
Sbjct: 83  GSCITHLCGSFIFFRVEMMEFLIFKDG 109


>Glyma12g16250.1 
          Length = 59

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)

Query: 58  KVIIKSADMLPDMQKEAVDIAVAAFERLNVEK--DVAEHIKKEFDKRHGPTWHCI 110
           K +I   DML  MQ++A D+A  A +  +V +  ++A  IKKEFD+ HGP W C+
Sbjct: 5   KAVIGETDMLQTMQQDATDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCM 59