Miyakogusa Predicted Gene

Lj0g3v0318139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318139.1 tr|G7KN01|G7KN01_MEDTR STAM-binding protein
OS=Medicago truncatula GN=MTR_6g083940 PE=4
SV=1,82.5,0.0000000003,seg,NULL,CUFF.21549.1
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g10350.1                                                        65   3e-11
Glyma08g04970.1                                                        65   4e-11
Glyma05g34700.2                                                        65   5e-11
Glyma05g34700.1                                                        65   5e-11
Glyma09g31540.1                                                        61   5e-10
Glyma05g07920.1                                                        57   8e-09
Glyma17g13080.3                                                        52   3e-07
Glyma17g13080.2                                                        52   3e-07
Glyma17g13080.1                                                        52   4e-07

>Glyma07g10350.1 
          Length = 519

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/40 (77%), Positives = 35/40 (87%)

Query: 2  TSSSSSGTINIAASAQKLDVDNRIALCFYFRIADNILRQA 41
          +SSS    INIAASAQK+DVDNRI+L FY+RIADNILRQA
Sbjct: 3  SSSSDRNRINIAASAQKVDVDNRISLRFYYRIADNILRQA 42


>Glyma08g04970.1 
          Length = 499

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 6  SSGTINIAASAQKLDVDNRIALCFYFRIADNILRQA 41
          SS TINIAAS QKLDVDNRIAL FY+RIADNIL+QA
Sbjct: 3  SSETINIAASTQKLDVDNRIALRFYYRIADNILKQA 38


>Glyma05g34700.2 
          Length = 441

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 6  SSGTINIAASAQKLDVDNRIALCFYFRIADNILRQA 41
          SS TINIAAS QKLDVDNRIAL FY+RIADNIL+QA
Sbjct: 3  SSETINIAASTQKLDVDNRIALRFYYRIADNILKQA 38


>Glyma05g34700.1 
          Length = 522

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 6  SSGTINIAASAQKLDVDNRIALCFYFRIADNILRQA 41
          SS TINIAAS QKLDVDNRIAL FY+RIADNIL+QA
Sbjct: 3  SSETINIAASTQKLDVDNRIALRFYYRIADNILKQA 38


>Glyma09g31540.1 
          Length = 520

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 31/32 (96%)

Query: 10 INIAASAQKLDVDNRIALCFYFRIADNILRQA 41
          INIAASAQK+DVDNRI+L FY+RIADNILRQA
Sbjct: 12 INIAASAQKVDVDNRISLRFYYRIADNILRQA 43


>Glyma05g07920.1 
          Length = 948

 Score = 57.4 bits (137), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/32 (81%), Positives = 28/32 (87%)

Query: 128 YTELEIAVSEIGIVGLNAENLGIGGVWVDSDP 159
           YTELEIAV EIGIVGL+AENLGI  VWVD +P
Sbjct: 41  YTELEIAVPEIGIVGLHAENLGIESVWVDGEP 72


>Glyma17g13080.3 
          Length = 839

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 128 YTELEIAVSEIGIVGLNAENLGIGGVWVDSDP 159
           YTELEIAV EIGIVGL+AENLGI  V VD +P
Sbjct: 41  YTELEIAVPEIGIVGLHAENLGIESVCVDGEP 72


>Glyma17g13080.2 
          Length = 948

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 128 YTELEIAVSEIGIVGLNAENLGIGGVWVDSDP 159
           YTELEIAV EIGIVGL+AENLGI  V VD +P
Sbjct: 41  YTELEIAVPEIGIVGLHAENLGIESVCVDGEP 72


>Glyma17g13080.1 
          Length = 1388

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 128 YTELEIAVSEIGIVGLNAENLGIGGVWVDSDP 159
           YTELEIAV EIGIVGL+AENLGI  V VD +P
Sbjct: 41  YTELEIAVPEIGIVGLHAENLGIESVCVDGEP 72