Miyakogusa Predicted Gene

Lj0g3v0317519.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0317519.1 tr|B5YNR2|B5YNR2_THAPS Predicted protein
(Fragment) OS=Thalassiosira pseudonana GN=THAPS_35685 PE=4
,40.16,2e-19,CS,CS-like domain; no description,NULL; coiled-coil,NULL;
CS,CS domain; HSP20-like chaperones,HSP20-,CUFF.21477.1
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g26970.1                                                       253   5e-68
Glyma18g07050.1                                                       249   4e-67
Glyma04g41480.1                                                        67   5e-12
Glyma06g13360.1                                                        67   6e-12
Glyma04g41480.2                                                        55   2e-08

>Glyma11g26970.1 
          Length = 158

 Score =  253 bits (645), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 118/130 (90%), Positives = 123/130 (94%)

Query: 1   MAEKLAPEKRHIFLHNGQKVFEWDQTLDEINIYINLPPNVHSKQFYYKIQSKHIELGIKG 60
           MAEKLAPEKRH F+HNGQKVFEWDQTLDE+NIYI LPPNVHSKQFY KIQSKH+ELGIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYIALPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDFTSPVKTDSSFWTLEDDIMHVTLQKRDKGQTWASPILGQGQLDAYTTDIEQK 120
           NPPYLNHD TSPVKTDSSFWTLEDDIMH+TLQKRDKGQTWASPI GQGQLD Y TD+EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPISGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEE 130
           RLMLQRFQEE
Sbjct: 121 RLMLQRFQEE 130


>Glyma18g07050.1 
          Length = 158

 Score =  249 bits (637), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 117/130 (90%), Positives = 122/130 (93%)

Query: 1   MAEKLAPEKRHIFLHNGQKVFEWDQTLDEINIYINLPPNVHSKQFYYKIQSKHIELGIKG 60
           MAEKLAPEKRH F+HNGQKVFEWDQTLDE+NIYI LPPNVHSKQFY KIQSKH+ELGIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYITLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDFTSPVKTDSSFWTLEDDIMHVTLQKRDKGQTWASPILGQGQLDAYTTDIEQK 120
           NPPYLN D TSPVKTDSSFWTL DDIMH+TLQKRDKGQTWASPILGQGQLD Y TD+EQK
Sbjct: 61  NPPYLNDDLTSPVKTDSSFWTLGDDIMHITLQKRDKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEE 130
           RLMLQRFQEE
Sbjct: 121 RLMLQRFQEE 130


>Glyma04g41480.1 
          Length = 301

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 1/103 (0%)

Query: 21  FEWDQTLDEINIYINLPPNVHSKQFYYKIQSKHIELGIKGNPPYLNHDFTSPVKTDSSFW 80
           + W Q+L E+N+ + +P    S+    +I+  H+++G+KG PP +  +F   VK D  +W
Sbjct: 144 YSWTQSLQEVNVNVPVPNGTKSRFVTVEIKKNHLKVGLKGQPPIIEGEFYKSVKPDDCYW 203

Query: 81  TLED-DIMHVTLQKRDKGQTWASPILGQGQLDAYTTDIEQKRL 122
           ++ED + + + L K D+ + W   + G  ++D    + E  +L
Sbjct: 204 SIEDQNAISILLTKHDQMEWWKCLVKGDPEIDTQKVEPENSKL 246


>Glyma06g13360.1 
          Length = 299

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 1/103 (0%)

Query: 21  FEWDQTLDEINIYINLPPNVHSKQFYYKIQSKHIELGIKGNPPYLNHDFTSPVKTDSSFW 80
           + W Q+L E+N+ + +P    S+    +I+  H+++G+KG PP +  +F   VK D  +W
Sbjct: 142 YSWTQSLQEVNVNVPVPNGTKSRFVTVEIKKNHLKVGLKGQPPIIEGEFHKSVKPDDCYW 201

Query: 81  TLED-DIMHVTLQKRDKGQTWASPILGQGQLDAYTTDIEQKRL 122
           ++ED + + + L K D+ + W   + G  ++D    + E  +L
Sbjct: 202 SIEDQNSISILLTKHDQMEWWKCLVKGDPEIDTQKVEPENSKL 244


>Glyma04g41480.2 
          Length = 215

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 38/63 (60%)

Query: 21  FEWDQTLDEINIYINLPPNVHSKQFYYKIQSKHIELGIKGNPPYLNHDFTSPVKTDSSFW 80
           + W Q+L E+N+ + +P    S+    +I+  H+++G+KG PP +  +F   VK D  +W
Sbjct: 144 YSWTQSLQEVNVNVPVPNGTKSRFVTVEIKKNHLKVGLKGQPPIIEGEFYKSVKPDDCYW 203

Query: 81  TLE 83
           ++E
Sbjct: 204 SIE 206