Miyakogusa Predicted Gene
- Lj0g3v0316469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0316469.1 tr|I3SLV8|I3SLV8_LOTJA ATP synthase gamma chain
OS=Lotus japonicus PE=2 SV=1,98.47,0,seg,NULL; no description,NULL;
ATP-synt,ATPase, F1 complex, gamma subunit; ATPASEGAMMA,ATPase, F1
co,CUFF.21467.1
(263 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g32460.1 442 e-124
Glyma06g22050.4 440 e-124
Glyma06g22050.3 440 e-124
Glyma06g22050.1 440 e-124
Glyma04g32460.3 439 e-123
Glyma06g22050.2 355 3e-98
Glyma13g27490.2 72 5e-13
Glyma13g27490.1 72 5e-13
Glyma15g11490.2 72 6e-13
Glyma15g11490.1 72 6e-13
Glyma08g42900.1 70 2e-12
Glyma13g27490.3 63 4e-10
>Glyma04g32460.1
Length = 320
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/263 (80%), Positives = 233/263 (88%)
Query: 1 MAMAAALRREGKXXXXXXXXXXXXXXXXXXDQTLNGFRSISTQIVRNRMKSVKNIQKITK 60
MAMAAALRREG+ DQ+ +G R ISTQ+VRNRMKSV+NIQKITK
Sbjct: 1 MAMAAALRREGRRLTQPINALRSSLISQSVDQSPHGARFISTQVVRNRMKSVRNIQKITK 60
Query: 61 AMKMVAASKLRAVQTRAENSRGLWQPFTALLGDATSVDVKKNVIVTVSSDKGLCGGINST 120
AMKMVAASKLRAVQTRAENSRGLWQPFTALLGD S DVKKNV+VT+SSDKGLCGGINST
Sbjct: 61 AMKMVAASKLRAVQTRAENSRGLWQPFTALLGDNPSADVKKNVVVTISSDKGLCGGINST 120
Query: 121 SVKISRALSKLNAGPDKETKYVILGEKAKAQLIRDSKQDILLSLTELQKNPLNYTQVSVL 180
SVKISR L KLN+GPDKETKYVILGEKAKAQL+RDS++ I+LSLTELQKNPLNYTQVSVL
Sbjct: 121 SVKISRVLYKLNSGPDKETKYVILGEKAKAQLLRDSRKHIVLSLTELQKNPLNYTQVSVL 180
Query: 181 ADDILKNVEFDALRIVFNKFHSVVQFYPTVSTVLSPEIVERETESGGMLGELDSYEIEGG 240
ADDILKNVE+DALRIVFNKFHSVVQF PTVSTVLSPE++ERE ESGG LGELDSYEIEGG
Sbjct: 181 ADDILKNVEYDALRIVFNKFHSVVQFLPTVSTVLSPEVIEREAESGGKLGELDSYEIEGG 240
Query: 241 DSKSEILQNLSEFQFSCVMFNAV 263
++K+EILQNL+EFQFSCVM+NAV
Sbjct: 241 ETKAEILQNLAEFQFSCVMYNAV 263
>Glyma06g22050.4
Length = 322
Score = 440 bits (1132), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/265 (80%), Positives = 233/265 (87%), Gaps = 2/265 (0%)
Query: 1 MAMAAALRREGKXXXXXXXXXXXXXXXX--XXDQTLNGFRSISTQIVRNRMKSVKNIQKI 58
MAMAAALRREG+ DQ +G RSISTQ+VRNRMKSV+NIQKI
Sbjct: 1 MAMAAALRREGRRLTQPINALHSSLNSSLISQDQAPHGARSISTQVVRNRMKSVRNIQKI 60
Query: 59 TKAMKMVAASKLRAVQTRAENSRGLWQPFTALLGDATSVDVKKNVIVTVSSDKGLCGGIN 118
TKAMKMVAASKLRAVQTR ENSRGLWQPFTALLGD SVDVKKNV+VT+SSDKGLCGGIN
Sbjct: 61 TKAMKMVAASKLRAVQTRTENSRGLWQPFTALLGDDPSVDVKKNVVVTISSDKGLCGGIN 120
Query: 119 STSVKISRALSKLNAGPDKETKYVILGEKAKAQLIRDSKQDILLSLTELQKNPLNYTQVS 178
STSVKISR L+KLN+GPDKETKYVILGEKAKAQL+RDSK+ I LSLTELQKNPLNYTQVS
Sbjct: 121 STSVKISRVLNKLNSGPDKETKYVILGEKAKAQLLRDSKKQIALSLTELQKNPLNYTQVS 180
Query: 179 VLADDILKNVEFDALRIVFNKFHSVVQFYPTVSTVLSPEIVERETESGGMLGELDSYEIE 238
VLADDILKNVE+DALRIVFNKFHSVVQF PTV+TVLSPE++ERE ESGG LGELDSYEIE
Sbjct: 181 VLADDILKNVEYDALRIVFNKFHSVVQFLPTVATVLSPEVIEREAESGGKLGELDSYEIE 240
Query: 239 GGDSKSEILQNLSEFQFSCVMFNAV 263
GG++K+EILQNL+EFQFSCVM+NAV
Sbjct: 241 GGETKAEILQNLAEFQFSCVMYNAV 265
>Glyma06g22050.3
Length = 322
Score = 440 bits (1132), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/265 (80%), Positives = 233/265 (87%), Gaps = 2/265 (0%)
Query: 1 MAMAAALRREGKXXXXXXXXXXXXXXXX--XXDQTLNGFRSISTQIVRNRMKSVKNIQKI 58
MAMAAALRREG+ DQ +G RSISTQ+VRNRMKSV+NIQKI
Sbjct: 1 MAMAAALRREGRRLTQPINALHSSLNSSLISQDQAPHGARSISTQVVRNRMKSVRNIQKI 60
Query: 59 TKAMKMVAASKLRAVQTRAENSRGLWQPFTALLGDATSVDVKKNVIVTVSSDKGLCGGIN 118
TKAMKMVAASKLRAVQTR ENSRGLWQPFTALLGD SVDVKKNV+VT+SSDKGLCGGIN
Sbjct: 61 TKAMKMVAASKLRAVQTRTENSRGLWQPFTALLGDDPSVDVKKNVVVTISSDKGLCGGIN 120
Query: 119 STSVKISRALSKLNAGPDKETKYVILGEKAKAQLIRDSKQDILLSLTELQKNPLNYTQVS 178
STSVKISR L+KLN+GPDKETKYVILGEKAKAQL+RDSK+ I LSLTELQKNPLNYTQVS
Sbjct: 121 STSVKISRVLNKLNSGPDKETKYVILGEKAKAQLLRDSKKQIALSLTELQKNPLNYTQVS 180
Query: 179 VLADDILKNVEFDALRIVFNKFHSVVQFYPTVSTVLSPEIVERETESGGMLGELDSYEIE 238
VLADDILKNVE+DALRIVFNKFHSVVQF PTV+TVLSPE++ERE ESGG LGELDSYEIE
Sbjct: 181 VLADDILKNVEYDALRIVFNKFHSVVQFLPTVATVLSPEVIEREAESGGKLGELDSYEIE 240
Query: 239 GGDSKSEILQNLSEFQFSCVMFNAV 263
GG++K+EILQNL+EFQFSCVM+NAV
Sbjct: 241 GGETKAEILQNLAEFQFSCVMYNAV 265
>Glyma06g22050.1
Length = 324
Score = 440 bits (1131), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/267 (80%), Positives = 233/267 (87%), Gaps = 4/267 (1%)
Query: 1 MAMAAALRREGKXXX----XXXXXXXXXXXXXXXDQTLNGFRSISTQIVRNRMKSVKNIQ 56
MAMAAALRREG+ DQ +G RSISTQ+VRNRMKSV+NIQ
Sbjct: 1 MAMAAALRREGRRLTQPINALHSSLNSSLISQSVDQAPHGARSISTQVVRNRMKSVRNIQ 60
Query: 57 KITKAMKMVAASKLRAVQTRAENSRGLWQPFTALLGDATSVDVKKNVIVTVSSDKGLCGG 116
KITKAMKMVAASKLRAVQTR ENSRGLWQPFTALLGD SVDVKKNV+VT+SSDKGLCGG
Sbjct: 61 KITKAMKMVAASKLRAVQTRTENSRGLWQPFTALLGDDPSVDVKKNVVVTISSDKGLCGG 120
Query: 117 INSTSVKISRALSKLNAGPDKETKYVILGEKAKAQLIRDSKQDILLSLTELQKNPLNYTQ 176
INSTSVKISR L+KLN+GPDKETKYVILGEKAKAQL+RDSK+ I LSLTELQKNPLNYTQ
Sbjct: 121 INSTSVKISRVLNKLNSGPDKETKYVILGEKAKAQLLRDSKKQIALSLTELQKNPLNYTQ 180
Query: 177 VSVLADDILKNVEFDALRIVFNKFHSVVQFYPTVSTVLSPEIVERETESGGMLGELDSYE 236
VSVLADDILKNVE+DALRIVFNKFHSVVQF PTV+TVLSPE++ERE ESGG LGELDSYE
Sbjct: 181 VSVLADDILKNVEYDALRIVFNKFHSVVQFLPTVATVLSPEVIEREAESGGKLGELDSYE 240
Query: 237 IEGGDSKSEILQNLSEFQFSCVMFNAV 263
IEGG++K+EILQNL+EFQFSCVM+NAV
Sbjct: 241 IEGGETKAEILQNLAEFQFSCVMYNAV 267
>Glyma04g32460.3
Length = 318
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/263 (80%), Positives = 233/263 (88%), Gaps = 2/263 (0%)
Query: 1 MAMAAALRREGKXXXXXXXXXXXXXXXXXXDQTLNGFRSISTQIVRNRMKSVKNIQKITK 60
MAMAAALRREG+ DQ+ +G R ISTQ+VRNRMKSV+NIQKITK
Sbjct: 1 MAMAAALRREGRRLTQPINALRSSLISQ--DQSPHGARFISTQVVRNRMKSVRNIQKITK 58
Query: 61 AMKMVAASKLRAVQTRAENSRGLWQPFTALLGDATSVDVKKNVIVTVSSDKGLCGGINST 120
AMKMVAASKLRAVQTRAENSRGLWQPFTALLGD S DVKKNV+VT+SSDKGLCGGINST
Sbjct: 59 AMKMVAASKLRAVQTRAENSRGLWQPFTALLGDNPSADVKKNVVVTISSDKGLCGGINST 118
Query: 121 SVKISRALSKLNAGPDKETKYVILGEKAKAQLIRDSKQDILLSLTELQKNPLNYTQVSVL 180
SVKISR L KLN+GPDKETKYVILGEKAKAQL+RDS++ I+LSLTELQKNPLNYTQVSVL
Sbjct: 119 SVKISRVLYKLNSGPDKETKYVILGEKAKAQLLRDSRKHIVLSLTELQKNPLNYTQVSVL 178
Query: 181 ADDILKNVEFDALRIVFNKFHSVVQFYPTVSTVLSPEIVERETESGGMLGELDSYEIEGG 240
ADDILKNVE+DALRIVFNKFHSVVQF PTVSTVLSPE++ERE ESGG LGELDSYEIEGG
Sbjct: 179 ADDILKNVEYDALRIVFNKFHSVVQFLPTVSTVLSPEVIEREAESGGKLGELDSYEIEGG 238
Query: 241 DSKSEILQNLSEFQFSCVMFNAV 263
++K+EILQNL+EFQFSCVM+NAV
Sbjct: 239 ETKAEILQNLAEFQFSCVMYNAV 261
>Glyma06g22050.2
Length = 254
Score = 355 bits (911), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 177/221 (80%), Positives = 191/221 (86%), Gaps = 2/221 (0%)
Query: 1 MAMAAALRREGKXXXXX--XXXXXXXXXXXXXDQTLNGFRSISTQIVRNRMKSVKNIQKI 58
MAMAAALRREG+ DQ +G RSISTQ+VRNRMKSV+NIQKI
Sbjct: 1 MAMAAALRREGRRLTQPINALHSSLNSSLISQDQAPHGARSISTQVVRNRMKSVRNIQKI 60
Query: 59 TKAMKMVAASKLRAVQTRAENSRGLWQPFTALLGDATSVDVKKNVIVTVSSDKGLCGGIN 118
TKAMKMVAASKLRAVQTR ENSRGLWQPFTALLGD SVDVKKNV+VT+SSDKGLCGGIN
Sbjct: 61 TKAMKMVAASKLRAVQTRTENSRGLWQPFTALLGDDPSVDVKKNVVVTISSDKGLCGGIN 120
Query: 119 STSVKISRALSKLNAGPDKETKYVILGEKAKAQLIRDSKQDILLSLTELQKNPLNYTQVS 178
STSVKISR L+KLN+GPDKETKYVILGEKAKAQL+RDSK+ I LSLTELQKNPLNYTQVS
Sbjct: 121 STSVKISRVLNKLNSGPDKETKYVILGEKAKAQLLRDSKKQIALSLTELQKNPLNYTQVS 180
Query: 179 VLADDILKNVEFDALRIVFNKFHSVVQFYPTVSTVLSPEIV 219
VLADDILKNVE+DALRIVFNKFHSVVQF PTV+TVLSPE++
Sbjct: 181 VLADDILKNVEYDALRIVFNKFHSVVQFLPTVATVLSPEVL 221
>Glyma13g27490.2
Length = 375
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 33/204 (16%)
Query: 38 RSISTQI------VRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFTALL 91
RS STQI +R R++SVKN QKIT+AMK+VAA+K+R Q N R + +L
Sbjct: 45 RSSSTQIQCGLRELRTRIESVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVL 104
Query: 92 GD------ATSVD--------VKKNVIVTVSSDKGLCGGINSTSVKISRALSKLNAGPDK 137
+ VD VKK +V ++ D+GLCGG N+ +K +A +++ +
Sbjct: 105 YNINEQLQTEDVDIPLTKVRPVKKVALVVITGDRGLCGGFNNAIIK--KAEARIRELKEL 162
Query: 138 ETKYVIL--GEKAKAQLIRDS--KQDILLSLTELQKNPLNYTQVSVLADDILK---NVEF 190
++ ++ G+K + IR D L L + +ADD+ + E
Sbjct: 163 GLQFTVISVGKKGNSYFIRRPYIPVDKFLEGGTLP----TAKEAQAIADDVFSLFVSEEV 218
Query: 191 DALRIVFNKFHSVVQFYPTVSTVL 214
D + +++ KF S+V+ P + T+L
Sbjct: 219 DKVELLYTKFVSLVKSDPVIHTLL 242
>Glyma13g27490.1
Length = 375
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 33/204 (16%)
Query: 38 RSISTQI------VRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFTALL 91
RS STQI +R R++SVKN QKIT+AMK+VAA+K+R Q N R + +L
Sbjct: 45 RSSSTQIQCGLRELRTRIESVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVL 104
Query: 92 GD------ATSVD--------VKKNVIVTVSSDKGLCGGINSTSVKISRALSKLNAGPDK 137
+ VD VKK +V ++ D+GLCGG N+ +K +A +++ +
Sbjct: 105 YNINEQLQTEDVDIPLTKVRPVKKVALVVITGDRGLCGGFNNAIIK--KAEARIRELKEL 162
Query: 138 ETKYVIL--GEKAKAQLIRDS--KQDILLSLTELQKNPLNYTQVSVLADDILK---NVEF 190
++ ++ G+K + IR D L L + +ADD+ + E
Sbjct: 163 GLQFTVISVGKKGNSYFIRRPYIPVDKFLEGGTLP----TAKEAQAIADDVFSLFVSEEV 218
Query: 191 DALRIVFNKFHSVVQFYPTVSTVL 214
D + +++ KF S+V+ P + T+L
Sbjct: 219 DKVELLYTKFVSLVKSDPVIHTLL 242
>Glyma15g11490.2
Length = 375
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 38 RSISTQI------VRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFTALL 91
RS +TQI +R R+ SVKN QKIT+AMK+VAA+K+R Q N R + +L
Sbjct: 45 RSSTTQIQCGLRELRTRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVL 104
Query: 92 GD------ATSVD--------VKKNVIVTVSSDKGLCGGINSTSVKISRALSKLNAGPDK 137
+ VD VKK +V V+ D+GLCGG N+ +K + A +
Sbjct: 105 YNINEQLLTEDVDIPLTKVRPVKKVALVVVTGDRGLCGGFNNAIIKKAEARIRELKELGL 164
Query: 138 ETKYVILGEKAKAQLIRDS--KQDILLSLTELQKNPLNYTQVSVLADDILK---NVEFDA 192
E + +G+K + IR D L L + +ADD+ + E D
Sbjct: 165 EFTVISVGKKGNSYFIRRPYIPVDRFLEGGTLP----TAKEAQAIADDVFSLFVSEEVDK 220
Query: 193 LRIVFNKFHSVVQFYPTVSTVL 214
+ +++ KF S+V+ P + T+L
Sbjct: 221 VELLYTKFVSLVKSDPVIHTLL 242
>Glyma15g11490.1
Length = 375
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 38 RSISTQI------VRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFTALL 91
RS +TQI +R R+ SVKN QKIT+AMK+VAA+K+R Q N R + +L
Sbjct: 45 RSSTTQIQCGLRELRTRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVL 104
Query: 92 GD------ATSVD--------VKKNVIVTVSSDKGLCGGINSTSVKISRALSKLNAGPDK 137
+ VD VKK +V V+ D+GLCGG N+ +K + A +
Sbjct: 105 YNINEQLLTEDVDIPLTKVRPVKKVALVVVTGDRGLCGGFNNAIIKKAEARIRELKELGL 164
Query: 138 ETKYVILGEKAKAQLIRDS--KQDILLSLTELQKNPLNYTQVSVLADDILK---NVEFDA 192
E + +G+K + IR D L L + +ADD+ + E D
Sbjct: 165 EFTVISVGKKGNSYFIRRPYIPVDRFLEGGTLP----TAKEAQAIADDVFSLFVSEEVDK 220
Query: 193 LRIVFNKFHSVVQFYPTVSTVL 214
+ +++ KF S+V+ P + T+L
Sbjct: 221 VELLYTKFVSLVKSDPVIHTLL 242
>Glyma08g42900.1
Length = 337
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 42/260 (16%)
Query: 33 TLNGFRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFTALLG 92
TL R S ++ R R+K+V+ QKIT+AMK+++A+++R Q + R A+L
Sbjct: 15 TLPPVRCGSREL-RERIKTVQTTQKITEAMKLISAARVRRAQEAVVSGRPFSSNLAAMLN 73
Query: 93 DAT--------------SVDVKKNVIVTVSSDKGLCGGINSTSVKIS----RALSKLNAG 134
D T + V+ +V V++D+GLCGG N + ++ + L KLN G
Sbjct: 74 DITQRLQNDDVSTPLTHARPVRTVALVVVTADRGLCGGFNKSVIRKALVRIEELEKLNLG 133
Query: 135 PDKETKYVILGEKAKAQLIRD-SKQDILL---SLTELQKNPLNYTQVSVLADDILK---N 187
+ +G+K + +K+ + S E+ P + V+ADD+ +
Sbjct: 134 ----CVVISVGKKGNSFFTHSINKKHPFVKVDSFIEIGGFP-TAKEAQVIADDVFSLFVS 188
Query: 188 VEFDALRIVFNKFHSVVQFYPTVSTVLS--------PEIVERETESGGMLGELDSYEIEG 239
E D + +V+ KF S+V+F P + +L EI ++ G + E D +++
Sbjct: 189 EEVDKVELVYAKFVSLVRFEPVIQNLLPLGEVCDVKDEIFRLSSKEGKLAVERDVVKLK- 247
Query: 240 GDSKSEILQNLSEFQFSCVM 259
+ E+ L EF+ VM
Sbjct: 248 --KEGEMCFPLMEFEQDPVM 265
>Glyma13g27490.3
Length = 196
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 20/110 (18%)
Query: 38 RSISTQI------VRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFTALL 91
RS STQI +R R++SVKN QKIT+AMK+VAA+K+R Q N R + +L
Sbjct: 45 RSSSTQIQCGLRELRTRIESVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVL 104
Query: 92 GD------ATSVD--------VKKNVIVTVSSDKGLCGGINSTSVKISRA 127
+ VD VKK +V ++ D+GLCGG N+ +K + A
Sbjct: 105 YNINEQLQTEDVDIPLTKVRPVKKVALVVITGDRGLCGGFNNAIIKKAEA 154