Miyakogusa Predicted Gene

Lj0g3v0316399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0316399.1 tr|I0Z940|I0Z940_9CHLO Methionine--tRNA ligase
OS=Coccomyxa subellipsoidea C-169 GN=metG PE=3
SV=1,48.48,1e-18,Anticodon-binding domain of a subclass of class I
aminoacyl-tRNA synthetases,Aminoacyl-tRNA syntheta,CUFF.21383.1
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g43550.1                                                       219   7e-58
Glyma20g23250.1                                                       217   2e-57

>Glyma10g43550.1 
          Length = 605

 Score =  219 bits (557), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 100/113 (88%), Positives = 107/113 (94%)

Query: 1   MEIGNIGNSYMDERAPWSPFKQGGAASEAAAKDIVIILETVRIIAVALFPVSPSLSWRIY 60
           +EIGN+GN YMD+RAPWS FKQGG A+EAAAKD+VIILETVRIIA+ALFPV+PSLSWRIY
Sbjct: 475 LEIGNVGNLYMDQRAPWSLFKQGGTAAEAAAKDLVIILETVRIIAIALFPVTPSLSWRIY 534

Query: 61  AQLGYSRDQFDAATWSDTRWGGLKGGQVMAQPKPVFARIENQTEVEDKRVAVG 113
           AQLGYSRDQFDAATW DT WGGLKGGQVMAQPKPVFARIENQTEVEDK VAVG
Sbjct: 535 AQLGYSRDQFDAATWRDTEWGGLKGGQVMAQPKPVFARIENQTEVEDKGVAVG 587


>Glyma20g23250.1 
          Length = 605

 Score =  217 bits (552), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 99/112 (88%), Positives = 107/112 (95%)

Query: 1   MEIGNIGNSYMDERAPWSPFKQGGAASEAAAKDIVIILETVRIIAVALFPVSPSLSWRIY 60
           +EIGN+GN YMD+RAPWS FKQGG A+EAAAKD+VIILETVRIIA+ALFPV+PSLSWRIY
Sbjct: 475 LEIGNVGNLYMDQRAPWSLFKQGGTAAEAAAKDLVIILETVRIIAIALFPVTPSLSWRIY 534

Query: 61  AQLGYSRDQFDAATWSDTRWGGLKGGQVMAQPKPVFARIENQTEVEDKRVAV 112
           AQLGYSRDQFDAATW DT+WGGLKGGQVMAQPKPVFARIENQTEVEDK VAV
Sbjct: 535 AQLGYSRDQFDAATWRDTKWGGLKGGQVMAQPKPVFARIENQTEVEDKGVAV 586