Miyakogusa Predicted Gene

Lj0g3v0316219.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0316219.1 Non Chatacterized Hit- tr|F6HCT8|F6HCT8_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,61.02,2e-16,
,CUFF.21368.1
         (59 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g38190.1                                                       108   9e-25
Glyma09g33540.1                                                        84   3e-17
Glyma01g02400.1                                                        79   1e-15

>Glyma02g38190.1 
          Length = 662

 Score =  108 bits (271), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/60 (80%), Positives = 55/60 (91%), Gaps = 1/60 (1%)

Query: 1  MKTKQEFEWVEAQNLV-LSKDLIGTAKQQLLFLAEIDRNRCLYDGPVLHRAIYRYKFCWL 59
          M+T+QE EW EAQN+V LS+DL+ TAKQQLLFLAE+DRNRCLYDGPVLHRA YRYK+CWL
Sbjct: 1  METEQELEWAEAQNMVFLSEDLVATAKQQLLFLAEVDRNRCLYDGPVLHRANYRYKYCWL 60


>Glyma09g33540.1 
          Length = 788

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/59 (64%), Positives = 44/59 (74%)

Query: 1  MKTKQEFEWVEAQNLVLSKDLIGTAKQQLLFLAEIDRNRCLYDGPVLHRAIYRYKFCWL 59
          M+ +QE EW EAQ + +S DLI  AK+QL FLA +DRNR LYDGP L RAIYRY  CWL
Sbjct: 1  MEPQQEMEWNEAQKIPISVDLIVVAKKQLQFLAAVDRNRHLYDGPALERAIYRYNACWL 59


>Glyma01g02400.1 
          Length = 852

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/59 (59%), Positives = 43/59 (72%)

Query: 1  MKTKQEFEWVEAQNLVLSKDLIGTAKQQLLFLAEIDRNRCLYDGPVLHRAIYRYKFCWL 59
          M+ +QE EW EAQ + +S DL   AK+QL FLA +D+NR LYDGP L RAIYRY  CW+
Sbjct: 1  MEPQQEMEWNEAQKIPISVDLEVVAKKQLQFLATVDKNRHLYDGPALDRAIYRYNACWI 59