Miyakogusa Predicted Gene

Lj0g3v0316049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0316049.1 Non Chatacterized Hit- tr|I3S2N8|I3S2N8_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,61.84,3e-18,no
description,NULL,CUFF.21356.1
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g02090.1                                                       169   1e-42
Glyma11g38150.1                                                       168   2e-42

>Glyma18g02090.1 
          Length = 197

 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 87/154 (56%), Positives = 105/154 (68%), Gaps = 13/154 (8%)

Query: 3   SSKSNPFWNESFSLDCSCPEEFFETLQKESLVLELRQSNGAATKVLRRIFGGSRLVGRGG 62
           ++K  PFWNESF+L+CSCP+EF E L+KESLV+ELRQS             GS +VG+G 
Sbjct: 55  NTKYVPFWNESFNLNCSCPQEFLEGLKKESLVVELRQSK----------IWGSHVVGKGE 104

Query: 63  IPWKTILESQNMEFKEWVKIDSCDGDS--STTFSVPEVQVEIKIKVVASEKKDNSSKRLN 120
           IPWK I ES NMEFKEWVK+D   G       F  P+VQVEIKI+V   E  +   +  N
Sbjct: 105 IPWKAIFESPNMEFKEWVKMDLVSGIDCEDVMFKAPQVQVEIKIQV-EKENNNRRKRLNN 163

Query: 121 KWNECGCKHGHDHHAWCSAEDYHVFSFGAALEAF 154
           +W+ECGCK GHD HAWCSAEDY +F+ GA LEAF
Sbjct: 164 RWDECGCKQGHDQHAWCSAEDYDIFALGAVLEAF 197


>Glyma11g38150.1 
          Length = 200

 Score =  168 bits (425), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/151 (60%), Positives = 107/151 (70%), Gaps = 14/151 (9%)

Query: 8   PFWNESFSLDCSCPEEFFETLQKESLVLELRQSNGAATKVLRRIFGGSRLVGRGGIPWKT 67
           PFWNESF+LDCSCP+EF E+L+KESLVLELRQ+     K+ R     S LVG+G IPWK 
Sbjct: 60  PFWNESFNLDCSCPQEFLESLKKESLVLELRQN-----KIFR-----SHLVGKGEIPWKA 109

Query: 68  ILESQNMEFKEWVKIDSCDGDSS---TTFSVPEVQVEIKIKVVASEKKDNSSKRLNK-WN 123
           ILES  MEFKEWVK+D   G S      F  P+VQVEIKI+V      +N  KRLN  W+
Sbjct: 110 ILESPKMEFKEWVKMDLVSGISDCEDIMFKAPQVQVEIKIQVEKENNNNNRRKRLNNKWD 169

Query: 124 ECGCKHGHDHHAWCSAEDYHVFSFGAALEAF 154
           ECGCKHGH  HAWCSA+DY +++ GA LEAF
Sbjct: 170 ECGCKHGHGQHAWCSADDYDIYALGAVLEAF 200