Miyakogusa Predicted Gene

Lj0g3v0315759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0315759.1 Non Chatacterized Hit- tr|B7PZE0|B7PZE0_IXOSC
Exosome component, putative OS=Ixodes scapularis
GN=Is,35.4,5e-16,HRDC,Helicase/RNase D C-terminal, HRDC domain;
HRDC-like,HRDC-like; POLYMYOSITIS/SCLERODERMA AUTOANT,CUFF.21330.1
         (463 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g24130.1                                                       610   e-174
Glyma05g11200.1                                                       582   e-166
Glyma05g13920.1                                                       226   3e-59
Glyma19g29290.1                                                       213   3e-55
Glyma06g46220.1                                                        52   9e-07

>Glyma17g24130.1 
          Length = 871

 Score =  610 bits (1573), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 326/483 (67%), Positives = 378/483 (78%), Gaps = 21/483 (4%)

Query: 1   MRIKLFSLPKEFDSS---DPPLVEVYKRSYDVCMQLYEKELLTENSYLHIYGLQGAGFNA 57
           MRIKLF+L KE +SS   D PLVEVYKRSYDVC+QLYEKELLTENSYLHIYGLQGAGFNA
Sbjct: 390 MRIKLFALSKESESSESSDTPLVEVYKRSYDVCIQLYEKELLTENSYLHIYGLQGAGFNA 449

Query: 58  QQLAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPIIPSKLRRLVKSKHPYVEH 117
           QQLAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMP+  SKLRRLVKSKHPYVEH
Sbjct: 450 QQLAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPLTTSKLRRLVKSKHPYVEH 509

Query: 118 NLDTVVNIIRHSIQKAAAFEVAAQELKGVHAATASDVVPVFNGTEST-LHKQ-----NSK 171
           NLDTVV+IIRHSIQ AA+FE AAQ+LK   A T S++  +        + KQ       K
Sbjct: 510 NLDTVVSIIRHSIQNAASFEEAAQQLKEAQAVTVSNICALVTCWSWVRIRKQPLCICKGK 569

Query: 172 ESFQHQDTDIQIKLKSNSLTSE-------LPRDSLTVSEQNKDANTGALSTLEGNGATVQ 224
            ++      ++I     ++  E       +  ++ ++ EQN+DAN GALST +GNGA VQ
Sbjct: 570 AAYNIPPPYLRIAKSLWAMGYEEEEVFLLMGINATSLMEQNRDANVGALSTAKGNGAAVQ 629

Query: 225 VLKKPAGAFGALLGNSASKRKHDPDKGMEEIKLEQIRSSVSLPFHSFLGSSEKSKPIVEA 284
           VLKKP GAFGALLG+SASKRK  P KG EEIKLEQIRSSVSLPFHSFLGSSEKS+P  E 
Sbjct: 630 VLKKPTGAFGALLGSSASKRKLGPGKGKEEIKLEQIRSSVSLPFHSFLGSSEKSEPTEEI 689

Query: 285 PSLASEMSDLHKPASDPVSTSTLDEIILLDSDIAAEDLEQSNLEDPIENRENRSTVSTSG 344
           PS+ASEMS+  KP SD VS S +DEII+L+SD  A+D+EQ+NLE+  E+RE  S VSTSG
Sbjct: 690 PSVASEMSEPQKPVSDVVSASPVDEIIMLESDTGAKDMEQNNLENSNEHREKDSVVSTSG 749

Query: 345 TEDEDVPMSLSELSSNFQKCFQSNNHNTKTRQPQKTD-PSGLFQLKPFDYKAA---MKFG 400
            EDED P+SLSELSSN +KCF SN+ N K RQP+KT+ PSGL QLKPFDY+AA   +KFG
Sbjct: 750 KEDEDEPVSLSELSSNLKKCFHSNDQNNKIRQPKKTEQPSGLVQLKPFDYEAARKHVKFG 809

Query: 401 ENTARASSRSGDGHIEIEEDSGGKKKRSNRGQGQSTDDLNKPLPQGRRRQAFPASGNRSA 460
           E+   ASS+  DGH+E+ EDSG KK+RS  GQGQ++ DL+K LPQGRRRQAFPASGNRS+
Sbjct: 810 EHKKHASSKGSDGHMEVVEDSGSKKQRSTTGQGQAS-DLSKQLPQGRRRQAFPASGNRSS 868

Query: 461 TFR 463
           TFR
Sbjct: 869 TFR 871


>Glyma05g11200.1 
          Length = 401

 Score =  582 bits (1499), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 305/438 (69%), Positives = 341/438 (77%), Gaps = 42/438 (9%)

Query: 31  MQLYEKELLTENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDIVARAEDESTGYVLPNKSV 90
           MQLYEKE LTENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDIVARAEDESTGYVLPNKSV
Sbjct: 1   MQLYEKEFLTENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDIVARAEDESTGYVLPNKSV 60

Query: 91  LEIAKQMPIIPSKLRRLVKSKHPYVEHNLDTVVNIIRHSIQKAAAFEVAAQELKGVHAAT 150
           LEIAKQMP+  SKLRRLVKSKHPYVEHNLDTVV+IIRHSIQ +AAFE AAQ+LK   A T
Sbjct: 61  LEIAKQMPLTTSKLRRLVKSKHPYVEHNLDTVVSIIRHSIQNSAAFEEAAQQLKEAQAGT 120

Query: 151 ASDVVPVFNGTES-TLHKQNSKESFQHQDTDIQIKLKSNSLTSELPRDSLTVSEQNKDAN 209
           ASDVVP  +GTE    H Q+SKES  HQDT++ I LKSNSL SE P+DSLT+++QN+DAN
Sbjct: 121 ASDVVPFTDGTEDPQSHTQDSKESSNHQDTNVPINLKSNSLRSEPPKDSLTIADQNRDAN 180

Query: 210 TGALSTLEGNGATVQVLKKPAGAFGALLGNSASKRKHDPDKGMEEIKLEQIRSSVSLPFH 269
            GALST +GNGATVQVLKKP GAFGALLGNSASKRK  PDKG E+ KLEQIRSSVSLPFH
Sbjct: 181 VGALSTTKGNGATVQVLKKPTGAFGALLGNSASKRKLGPDKGKEDSKLEQIRSSVSLPFH 240

Query: 270 SFLGSSEKSKPIVEAPSLASEMSDLHKPASDPVSTSTLDEIILLDSDIAAEDLEQSNLED 329
           SFLGSSEKS+P VE  ++ASEM +  +P SD VS S LDEII+L+S              
Sbjct: 241 SFLGSSEKSEPTVETHTVASEMLESQRPVSDVVSVSPLDEIIMLES-------------- 286

Query: 330 PIENRENRSTVSTSGTEDEDVPMSLSELSSNFQKCFQSNNHNTKTRQPQKTD-PSGLFQL 388
                         GTEDED  +SL ELSSNF+KCF SN+ N KTR P+KT+ PSGL  +
Sbjct: 287 --------------GTEDEDESVSLLELSSNFKKCFHSNDQNYKTRWPKKTEQPSGLVPM 332

Query: 389 KPFDYKAA---MKFGENTARASSRSGDGHIEIEEDSGGKKKRSNRGQGQSTDDLNKPLPQ 445
           KPFDY+AA   +KFGE+T  ASS+  D H+E+ EDSG KK+RS  GQGQ        LPQ
Sbjct: 333 KPFDYEAARKHVKFGEHTKHASSKGSDSHMEV-EDSGSKKQRSTIGQGQ--------LPQ 383

Query: 446 GRRRQAFPASGNRSATFR 463
           GRRRQAFPASGNRS+TFR
Sbjct: 384 GRRRQAFPASGNRSSTFR 401


>Glyma05g13920.1 
          Length = 383

 Score =  226 bits (577), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 108/144 (75%), Positives = 123/144 (85%)

Query: 1   MRIKLFSLPKEFDSSDPPLVEVYKRSYDVCMQLYEKELLTENSYLHIYGLQGAGFNAQQL 60
           MRI+LFS+ KE +S D PLVEVYK SY VCM+LYEKELLTE S+L IYGLQGAGFNAQQL
Sbjct: 240 MRIELFSMLKEPESVDAPLVEVYKCSYKVCMRLYEKELLTEKSFLRIYGLQGAGFNAQQL 299

Query: 61  AIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPIIPSKLRRLVKSKHPYVEHNLD 120
           A+VSGL +WRD VAR +D+STGYVLPNKS+LEIAKQMP+  + LR LV S+HPYVEHNLD
Sbjct: 300 AVVSGLFKWRDFVARVKDDSTGYVLPNKSILEIAKQMPVTANNLRLLVNSRHPYVEHNLD 359

Query: 121 TVVNIIRHSIQKAAAFEVAAQELK 144
           ++VNIIRHSIQ  AAFE  AQ LK
Sbjct: 360 SLVNIIRHSIQNTAAFEEIAQLLK 383


>Glyma19g29290.1 
          Length = 280

 Score =  213 bits (542), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/277 (45%), Positives = 160/277 (57%), Gaps = 69/277 (24%)

Query: 22  VYKRSYDVCMQLYEKELLTENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDIVARAEDEST 81
           VYKRSYDVCMQLYEKELL E+SYLHI+GL+GAGFNAQQLA+VSGL EWRD +ARA+DE  
Sbjct: 1   VYKRSYDVCMQLYEKELLKEDSYLHIWGLRGAGFNAQQLAVVSGLWEWRDGLARADDEGP 60

Query: 82  GYVLPNKSVLEIAKQMPIIPSKLRRLV-KSKHPYVEHNLDTVVNIIRHSIQKAAAFEVAA 140
           GYVLPN+ +LEIA QMP+I S LRR+V ++KHPYVE +LD +VNI+RHS+Q AAAFE AA
Sbjct: 61  GYVLPNRIILEIANQMPVIISNLRRIVGRTKHPYVERSLDVIVNIVRHSMQNAAAFEEAA 120

Query: 141 QELKGVHAATASDVVPVFNGTESTLHKQNSKESFQHQ-----DTDIQIKLKSNSLTSELP 195
             LK  HAA+                     E F+        +D  I L          
Sbjct: 121 LRLKEEHAAS---------------------EFFRWYFCLVIYSDFHIVLNK-------- 151

Query: 196 RDSLTVSEQNKDANTGALSTLEGNGATVQVLKKPAGAFGALLGNSASKRKHDPDKGMEEI 255
                 SE++   N G  S L  + +TV+                            +EI
Sbjct: 152 ------SERSILVNYGYASNLSNSRSTVK----------------------------KEI 177

Query: 256 KLEQIRSSVSLPFHSFLGSSEKSKPIVEAPSLASEMS 292
           K EQ RSS+++P    LG++EKS+ + E PS+  E S
Sbjct: 178 KPEQSRSSLNIPSPLLLGNNEKSRLVAETPSVTYETS 214


>Glyma06g46220.1 
          Length = 840

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 10/81 (12%)

Query: 19  LVEVYKRSYDVCMQLYEKELLT---ENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDIVAR 75
           ++E  +RS  +C+QL++KE+     E+S L +       F+ +   IV  LC WRD++AR
Sbjct: 264 VLEASRRSNMICLQLFKKEIEASPGESSALSL-------FSRRIQNIVRQLCTWRDLMAR 316

Query: 76  AEDESTGYVLPNKSVLEIAKQ 96
             DES  YVL +++++ +A Q
Sbjct: 317 IHDESLKYVLSDQAIVALASQ 337