Miyakogusa Predicted Gene

Lj0g3v0315359.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0315359.1 tr|B9HHZ5|B9HHZ5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_564123 PE=4
SV=1,56.76,0.000000000002,coiled-coil,NULL; seg,NULL; GYF domain,GYF;
DUF4339,Domain of unknown function DUF4339,CUFF.21302.1
         (233 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g36110.1                                                       251   6e-67
Glyma10g31450.1                                                       235   3e-62
Glyma07g15860.1                                                        57   2e-08

>Glyma20g36110.1 
          Length = 500

 Score =  251 bits (640), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 141/237 (59%), Positives = 165/237 (69%), Gaps = 7/237 (2%)

Query: 1   MASENG---HGSQPQISGDNVTELGWYVLGQDQQQLGPYAFSELREHFSNGYIFENTLVW 57
           M S+NG   H   PQ   + VTE+GWYVLG+DQQQ+GPYAFSEL +HF NGY+ ENT VW
Sbjct: 1   MTSQNGDESHHPPPQAQAEKVTEVGWYVLGEDQQQIGPYAFSELCQHFLNGYLSENTFVW 60

Query: 58  SEGRSEWQPLSSISSLWAEINQGGPDSSTAVSAHEVDEFERWQREIQEAEAQVEGSEFGS 117
           SEG SEWQPLSS+S LWA+IN+ GPDSST VSA +VDEFERWQ+EIQE EAQVEGSEFGS
Sbjct: 61  SEGSSEWQPLSSVSDLWAQINRQGPDSSTTVSAPDVDEFERWQKEIQEVEAQVEGSEFGS 120

Query: 118 ISGNVGDSVAGEDFERPSXXXXXXXXXXXXXXXKYKWDRNFRVWVPQEHTSGSTEPYGVE 177
           +SGNVG + AGED ERPS                YKWDR+ R WVPQ++ +GST+PYGVE
Sbjct: 121 LSGNVGGTGAGEDSERPSTPPEGEEGFTDDDGTVYKWDRSLRAWVPQDYPTGSTKPYGVE 180

Query: 178 EMTFLKEDEVFP-LANSDAPXXXXXXXXXXXXXXXXXXXANEANNPNTVADGKRKLS 233
           EMTFL+E+EVFP + NSDA                      E NN N ++ GKR LS
Sbjct: 181 EMTFLEEEEVFPTIPNSDA---SEKFEDSPKLSVSVPPLKEEENNTNVISGGKRMLS 234


>Glyma10g31450.1 
          Length = 490

 Score =  235 bits (599), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/237 (54%), Positives = 149/237 (62%), Gaps = 17/237 (7%)

Query: 1   MASENG---HGSQPQISGDNVTELGWYVLGQDQQQLGPYAFSELREHFSNGYIFENTLVW 57
           M S NG   H   PQ   + +TE+GWYVLG+DQQQ+GPYAFSELREHF NGY+ ENT VW
Sbjct: 1   MTSLNGDESHHPPPQPQAEKITEVGWYVLGEDQQQIGPYAFSELREHFLNGYLSENTFVW 60

Query: 58  SEGRSEWQPLSSISSLWAEINQGGPDSSTAVSAHEVDEFERWQREIQEAEAQVEGSEFGS 117
           SEGR         S++   +      +   VSA +VDEFERWQ+EIQEAEAQVEGSEFGS
Sbjct: 61  SEGR-------KFSTIIIRV------TCYVVSAPDVDEFERWQKEIQEAEAQVEGSEFGS 107

Query: 118 ISGNVGDSVAGEDFERPSXXXXXXXXXXXXXXXKYKWDRNFRVWVPQEHTSGSTEPYGVE 177
           +SGN G + AGED ERPS                YKWDRN R WVPQEH +GSTEPYGV+
Sbjct: 108 LSGNAGSTGAGEDSERPSTPPEGEEEFTDDDGTVYKWDRNLRAWVPQEHPTGSTEPYGVQ 167

Query: 178 EMTFLKEDEVFP-LANSDAPXXXXXXXXXXXXXXXXXXXANEANNPNTVADGKRKLS 233
           EMTFL+E+EVFP +  SDA                     NEANN N V+  KRKLS
Sbjct: 168 EMTFLEEEEVFPTIPISDASEKFEDSPKLSVSVPPLKEETNEANNTNVVSGEKRKLS 224


>Glyma07g15860.1 
          Length = 92

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/29 (82%), Positives = 26/29 (89%)

Query: 43 EHFSNGYIFENTLVWSEGRSEWQPLSSIS 71
          EHF NGY FENT VWS+GRSEWQPLSS+S
Sbjct: 62 EHFLNGYFFENTFVWSKGRSEWQPLSSVS 90