Miyakogusa Predicted Gene

Lj0g3v0315349.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0315349.1 Non Chatacterized Hit- tr|F2UK21|F2UK21_SALS5
Putative uncharacterized protein OS=Salpingoeca sp.
(s,36.91,3e-19,seg,NULL; RRM_5,NULL; RNA-binding domain, RBD,NULL;
RRM,RNA recognition motif domain; RNA recognitio,CUFF.21301.1
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g31450.1                                                       263   5e-71
Glyma20g36110.1                                                       259   7e-70
Glyma20g36110.2                                                       259   9e-70
Glyma20g24130.1                                                        57   1e-08
Glyma10g42890.1                                                        56   2e-08
Glyma06g15370.1                                                        50   9e-07
Glyma08g17310.1                                                        48   5e-06

>Glyma10g31450.1 
          Length = 490

 Score =  263 bits (673), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 128/162 (79%), Positives = 136/162 (83%)

Query: 1   MSVTPAKFEQKGDXXXXXXXXXXXXXXXXXXXXXMLGWGGRDDAKLSIPATVILRYMFSP 60
           MSV+ AKFEQKGD                     MLGWGGRDDAK+SIPATVILRYMF+P
Sbjct: 329 MSVSQAKFEQKGDKFVSKQVDNKKKKKLKKVEDKMLGWGGRDDAKVSIPATVILRYMFAP 388

Query: 61  AEMRADENLRLELEEDVKEECTKLGPIDSVKVCENHPQGVVLVRFKDRKDAQTCIDTMNG 120
           AEMRADENLRLELEEDVKEECTKLGP+DSVK+CENHPQGVVLVRFKDRKDAQ CI+ MNG
Sbjct: 389 AEMRADENLRLELEEDVKEECTKLGPLDSVKICENHPQGVVLVRFKDRKDAQKCIELMNG 448

Query: 121 RWFGGRQIHASEDDGLVNHALVRDLDEDAKRLEQFGAELEGE 162
           RWFGGRQIHASEDDG VNHALVRDL+EDA RLEQFGAELEG+
Sbjct: 449 RWFGGRQIHASEDDGSVNHALVRDLEEDAIRLEQFGAELEGD 490


>Glyma20g36110.1 
          Length = 500

 Score =  259 bits (663), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 126/162 (77%), Positives = 134/162 (82%)

Query: 1   MSVTPAKFEQKGDXXXXXXXXXXXXXXXXXXXXXMLGWGGRDDAKLSIPATVILRYMFSP 60
           MSV+ AKFEQKGD                     MLGWGGRDDAK+SIPATVILRYMF+P
Sbjct: 339 MSVSQAKFEQKGDKFVSKQVDGKKKKKLKKVEDKMLGWGGRDDAKVSIPATVILRYMFAP 398

Query: 61  AEMRADENLRLELEEDVKEECTKLGPIDSVKVCENHPQGVVLVRFKDRKDAQTCIDTMNG 120
           AEMRADENL LELEEDVKEECTKLGP+DSVK+CENHPQGVVLVRFKDRKDAQ CI+ MNG
Sbjct: 399 AEMRADENLHLELEEDVKEECTKLGPVDSVKICENHPQGVVLVRFKDRKDAQKCIELMNG 458

Query: 121 RWFGGRQIHASEDDGLVNHALVRDLDEDAKRLEQFGAELEGE 162
           RWFGGRQIHASEDDG VNHALVRDL+ED  RLEQFGAELEG+
Sbjct: 459 RWFGGRQIHASEDDGSVNHALVRDLEEDVIRLEQFGAELEGD 500


>Glyma20g36110.2 
          Length = 445

 Score =  259 bits (662), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 126/162 (77%), Positives = 134/162 (82%)

Query: 1   MSVTPAKFEQKGDXXXXXXXXXXXXXXXXXXXXXMLGWGGRDDAKLSIPATVILRYMFSP 60
           MSV+ AKFEQKGD                     MLGWGGRDDAK+SIPATVILRYMF+P
Sbjct: 284 MSVSQAKFEQKGDKFVSKQVDGKKKKKLKKVEDKMLGWGGRDDAKVSIPATVILRYMFAP 343

Query: 61  AEMRADENLRLELEEDVKEECTKLGPIDSVKVCENHPQGVVLVRFKDRKDAQTCIDTMNG 120
           AEMRADENL LELEEDVKEECTKLGP+DSVK+CENHPQGVVLVRFKDRKDAQ CI+ MNG
Sbjct: 344 AEMRADENLHLELEEDVKEECTKLGPVDSVKICENHPQGVVLVRFKDRKDAQKCIELMNG 403

Query: 121 RWFGGRQIHASEDDGLVNHALVRDLDEDAKRLEQFGAELEGE 162
           RWFGGRQIHASEDDG VNHALVRDL+ED  RLEQFGAELEG+
Sbjct: 404 RWFGGRQIHASEDDGSVNHALVRDLEEDVIRLEQFGAELEGD 445


>Glyma20g24130.1 
          Length = 577

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 11/105 (10%)

Query: 36  LGWGGRDDAKLSIPAT---------VILRYMFSPAEMRADENLRLELEEDVKEECTKLGP 86
           L  GG      +IP+          ++L+ MF P +   + +  L+++EDV+ EC+KLG 
Sbjct: 460 LAGGGLQIPTATIPSIDTIGVASECLMLKNMFDPKD-EIEPDFDLDIKEDVEAECSKLGT 518

Query: 87  IDSVKVCENHPQGVVLVRFKDRKDAQTCIDTMNGRWFGGRQIHAS 131
           +  + V +    G V +RF+D + A +    ++GRWF G+ I AS
Sbjct: 519 LKHIYV-DKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITAS 562


>Glyma10g42890.1 
          Length = 597

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 46  LSIPAT-VILRYMFSPAEMRADENLRLELEEDVKEECTKLGPIDSVKVCENHPQGVVLVR 104
           + +P+  ++L+ MF P +   + +  L+++EDV+ EC+K G +  + V +    G V +R
Sbjct: 498 IGVPSECLMLKNMFDPKD-ETEPDFDLDIKEDVEAECSKFGALKHIYV-DKKSAGFVYLR 555

Query: 105 FKDRKDAQTCIDTMNGRWFGGRQIHAS 131
           F+D + A +    ++GRWF G+ I AS
Sbjct: 556 FEDTQSAISAQQALHGRWFAGKMITAS 582


>Glyma06g15370.1 
          Length = 549

 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 52  VILRYMFSPAEMRADENLRLELEEDVKEECTKLGPIDSVKVCENHPQGVVLVRFKDRKDA 111
           ++L+ MF P     + +  L+++EDV+EEC+K G +  + V +    G V ++F+  + A
Sbjct: 457 LLLKNMFDP-NTETEPDFDLDIKEDVEEECSKYGRVKHIYV-DKRSAGFVYLQFETVEAA 514

Query: 112 QTCIDTMNGRWFGGRQIHA 130
                 M+ RWF GR I A
Sbjct: 515 SAAQRAMHTRWFAGRMISA 533


>Glyma08g17310.1 
          Length = 561

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 72  ELEEDVKEECTKLGPIDSVKVCEN---HPQGVVLVRFKDRKDAQTCIDTMNGRWFGGRQI 128
           E  EDV  E  K G I + KVC+N   H +G V V++K    A    +T+NGR+F G+Q+
Sbjct: 257 EFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKSLDSALLAYNTVNGRYFAGKQV 316