Miyakogusa Predicted Gene

Lj0g3v0315179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0315179.1 tr|G7L1F1|G7L1F1_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_7g075820 PE=4 SV=1,31.13,5e-19,domain in
FBox and BRCT domain containing pl,FBD; no description,NULL; FAMILY
NOT NAMED,NULL; seg,NU,gene.g24552.t1.1
         (247 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46320.1                                                       136   2e-32
Glyma18g35330.1                                                       109   3e-24
Glyma08g46590.2                                                       105   4e-23
Glyma18g35320.1                                                        85   6e-17
Glyma18g35370.1                                                        77   1e-14
Glyma18g35360.1                                                        74   1e-13
Glyma17g05620.1                                                        64   1e-10
Glyma08g46590.1                                                        64   2e-10
Glyma13g43040.1                                                        55   8e-08

>Glyma08g46320.1 
          Length = 379

 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 135/253 (53%), Gaps = 18/253 (7%)

Query: 8   IFSCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPILQDLKA 67
           I +C TLVVLKL                    HL+        +L ++ H CPIL+DL+A
Sbjct: 131 ILNCKTLVVLKLYRFRVNALGLVHLPALKTL-HLDNFTMLETWHLAKVLHECPILEDLRA 189

Query: 68  HDID-YDQQDTFCVEEIKSLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFPKVEVVP 126
           +++  Y++ D   V E + +PKL+ A++    F   IPLK   NVEYL     P  E  P
Sbjct: 190 NNMFFYNKSD---VVEFQIMPKLVKAEIKVN-FRFEIPLKVASNVEYLRFFIKPDTECFP 245

Query: 127 EFPNLMHMNLH---LLSWDSVYKMLKNSPKLQVFEVVSNGGSFVPD----PHIVPECLTS 179
            F NL+H+ +    ++ W+ V++M+K+ PKLQ F +     SF P     P IVPEC++S
Sbjct: 246 VFHNLIHLEVSFWFVVRWNLVFEMIKHCPKLQTFVLFLPLESFPPMVWTFPQIVPECISS 305

Query: 180 QFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASEL-----KDELFTELAS 234
           + R+C++  Y G   EL+FAKYI++NS  LQ+M I +  +  +       K  +  ELA 
Sbjct: 306 KLRRCTIMNYKGKKYELQFAKYILQNSRALQSMTIHNKRVRNTYFANPQDKIRILQELAM 365

Query: 235 CQRRSALCELSFK 247
           C + S  C++ FK
Sbjct: 366 CPKSSTTCKILFK 378


>Glyma18g35330.1 
          Length = 342

 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 30/258 (11%)

Query: 2   ISLNCCIFSCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPI 61
           ++L CCI + TTLV LKLKG+                 HL +V F   + L ++   CP+
Sbjct: 95  LNLPCCILTSTTLVDLKLKGLTLNSRVSSVDLPSLKTLHLRKVHFVEPRLLLQILSACPL 154

Query: 62  LQDLKAHDIDYDQQDTFCVEE-IKSLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFP 120
           L+DL    +     + F  +E ++ +PKL+ AD+     D+   +    NVE+L      
Sbjct: 155 LEDLLIRSLHV--TNNFSSDEHLERMPKLVKADISNASIDV--QMATFYNVEFL------ 204

Query: 121 KVEVVPEF--------PNLMHMNL----HLLSWDSVYKMLKNSPKLQVFEVVSNGGSFVP 168
           + +V  +F         NL HM L           +  +L   P LQ+  VV  G  FV 
Sbjct: 205 RTQVGSDFFSDNKHTFLNLTHMELIFRFRFNVLGRLINLLHECPNLQIL-VVDEGNLFVK 263

Query: 169 D------PHIVPECLTSQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILAS 222
                  P  VP+CL++Q ++C V+ Y G  SELRFA+Y+++N+  L +M I S+    S
Sbjct: 264 TSSDVSYPQFVPKCLSTQLKRCCVKKYGGQESELRFARYVLQNARVLYSMTIYSISSSNS 323

Query: 223 ELKDELFTELASCQRRSA 240
             + ++  +L+SC R SA
Sbjct: 324 GERLQMIKKLSSCPRISA 341


>Glyma08g46590.2 
          Length = 380

 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 31/264 (11%)

Query: 4   LNCCIFSCTTLVVLKLKGIXXXX----XXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGC 59
           L   +FSC TLVVLKL G                      HL+     R +++ EL  G 
Sbjct: 125 LPSALFSCKTLVVLKLIGGLNRNPFPLDFKSVDLPLLTTLHLQSFILER-RDMAELLRGS 183

Query: 60  PILQDLKAHDIDYDQQDTFCVEEIKSLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKF 119
           P L+ L    + +   +       + LPKLL A + +     ++PL+ V NV++L I   
Sbjct: 184 PNLEYLFVGHMYFSGPEA----RFERLPKLLRATIAFG----HVPLEVVNNVQFLRIDWM 235

Query: 120 PKVE---VVPEFPNLMHMNLH----LLSWDSVYKMLKNSPKLQVFEV---------VSNG 163
              E   ++PEF NL H+ L        W  V ++++  P LQ+ ++           + 
Sbjct: 236 EHKEEANLIPEFQNLTHLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRDDE 295

Query: 164 GSFVPDPHIVPECLTSQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASE 223
           G+  P P  VP  ++   + C +  Y G+  ELRFA+YIM N+  L+TM I +    + +
Sbjct: 296 GADWPFPRSVPSSISLHLKTCFIRCYGGSKGELRFARYIMRNARHLRTMKISTYA--SRQ 353

Query: 224 LKDELFTELASCQRRSALCELSFK 247
            K  +  +L+ C RRS +C+LSFK
Sbjct: 354 QKFNMLKKLSLCPRRSRICKLSFK 377


>Glyma18g35320.1 
          Length = 345

 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 96/223 (43%), Gaps = 51/223 (22%)

Query: 40  HLEQVKFTRYQNLTELFHGCPILQDLKAHDIDYDQQDTFCVEEIKSLPKLLTADLHYQWF 99
           HL  V F++ ++L +L  G P L+DL+A                                
Sbjct: 159 HLSSVAFSKDRDLAQLLSGSPNLEDLEAK------------------------------- 187

Query: 100 DIYIPLKAVCNVEYLSITKFPKVEV---------VPEFPNLMHMNLHLLSWDS---VYKM 147
               PL+ V NV++L I     + V           EF NL H  L   S+     V  +
Sbjct: 188 ---FPLEVVDNVQFLRINWVLIISVRFFKDHNGFTSEFQNLTH--LEFFSYRGGFFVLDL 242

Query: 148 LKNSPKLQVFEVVSNGGSFVPD---PHIVPECLTSQFRKCSVEYYNGTPSELRFAKYIME 204
           +K  PKLQ+  +     +   +   P  VP C++   + C+++ YNG+  E RF  YIME
Sbjct: 243 IKRCPKLQILTIYKVDSALFAEGDYPQSVPICISFHLKICTLKRYNGSKDEFRFVTYIME 302

Query: 205 NSTTLQTMMICSMPILASELKDELFTELASCQRRSALCELSFK 247
           NS  LQ M I     +  E K E+F +L+ C R S  C+L F+
Sbjct: 303 NSKYLQIMTISCNSDINKERKLEMFQKLSLCTRCSTSCKLLFE 345


>Glyma18g35370.1 
          Length = 409

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 116/271 (42%), Gaps = 27/271 (9%)

Query: 2   ISLNCCIFSCTTLVVLKLKGIXXXXXXXXXXXX-XXXXXHL-EQVKFTRYQNLTELFHGC 59
           ++L  C+F C T+ V+KL G+                  H+ ++V F  +  + +L  GC
Sbjct: 139 VALPRCLFHCDTVSVMKLNGVFLNALASFSVSLPLLKVLHVGDRVLFGCHDYVVKLLAGC 198

Query: 60  PILQDLKAHDIDYDQ-QDTFCVEE--IKSLPKLLTADLHYQWFD-----IYIPLKAVCNV 111
           P L+DL       D      C E      L  L +A + + W +     + +  +A+ NV
Sbjct: 199 PALEDLVLESTYNDACGGVVCAEGNFQLDLKHLSSAKIGFSWKERCLKSMLLIFRALSNV 258

Query: 112 EYLSIT-------KFPKVEVVPEFPNLMHMNLHL--LSWDSVYKMLKNSPKLQVFEVVSN 162
             LS++       K      +P F  L+ + +     SWD +  +L+ S KL+V  +   
Sbjct: 259 RCLSLSTSTVACLKHASTSDIPVFDKLIQLEISFGNYSWDLLASLLQRSHKLEVLTIYKE 318

Query: 163 GGSFVPD-------PHIVPECLTSQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMIC 215
              +          P +VPECL      C  EY  G  +EL F  YIM+N+  L+TM I 
Sbjct: 319 PQKYAKGQEPRWIHPLLVPECLLHLKTFCLREY-QGLETELDFVGYIMQNARVLETMTIY 377

Query: 216 SMPILASELKDELFTELASCQRRSALCELSF 246
               L SE K ++   L+  QR    C++ F
Sbjct: 378 ISSSLGSEEKLQIRRHLSILQRNFETCQIVF 408


>Glyma18g35360.1 
          Length = 357

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 35/213 (16%)

Query: 40  HLEQVKFTRYQNLTELFHGCPILQDLKAHDIDYDQQDTFCVEEIKSLP-----KLLTADL 94
           HL+ V     + L E+   CP+L+DL    +      ++C      LP     K L  D+
Sbjct: 130 HLKMVHLRECRCLVEILAACPVLEDLFISSLRV--TSSYCHGACIQLPTLSNVKFLRTDV 187

Query: 95  HYQWFDIYIPLKAVCNVEYLSITKFPKVEVVPEFPNLMHMNLHLLSWDSVYKMLKNSPKL 154
             Q    ++ L    N+ YL +                 ++ H   WD + K+L   P L
Sbjct: 188 -VQLRTTFVGLFTFVNLTYLELI----------------VDAHY--WDWLLKLLHCCPNL 228

Query: 155 QVFEVVSNGGSFVPD--------PHIVPECLTSQFRKCSVEYYNGTPSELRFAKYIMENS 206
           Q+  V+  G SF            H+VP+CL+S+ + C  + Y G   E +FA+YIM+N+
Sbjct: 229 QIL-VIDKGNSFNKTSNDENWVYSHLVPKCLSSKLKTCRFQKYEGWECEFQFARYIMQNA 287

Query: 207 TTLQTMMICSMPILASELKDELFTELASCQRRS 239
             L    ICS        K ++   L+SC R S
Sbjct: 288 RALCAFTICSTGFSPLAAKFQMIKRLSSCPRIS 320


>Glyma17g05620.1 
          Length = 158

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 46/78 (58%)

Query: 170 PHIVPECLTSQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELF 229
           P  +P C++   + C +  Y G+  E +FA+YIM+N++ LQTM IC+        K E+ 
Sbjct: 81  PQSIPTCVSLHLKTCRLTNYVGSKGEFQFARYIMQNASHLQTMTICTNTSSNEGEKLEMI 140

Query: 230 TELASCQRRSALCELSFK 247
             L+SC R SA C+L FK
Sbjct: 141 ENLSSCTRCSATCKLLFK 158


>Glyma08g46590.1 
          Length = 515

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 29/209 (13%)

Query: 4   LNCCIFSCTTLVVLKLKGIXXX----XXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGC 59
           L   +FSC TLVVLKL G                      HL+     R +++ EL  G 
Sbjct: 303 LPSALFSCKTLVVLKLIGGLNRNPFPLDFKSVDLPLLTTLHLQSFILER-RDMAELLRGS 361

Query: 60  PILQDLKAHDIDYDQQDTFCVEEIKSLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKF 119
           P L+ L    + +   +       + LPKLL A + +     ++PL+ V NV++L I   
Sbjct: 362 PNLEYLFVGHMYFSGPEA----RFERLPKLLRATIAFG----HVPLEVVNNVQFLRIDWM 413

Query: 120 PKVE---VVPEFPNLMHMNLH----LLSWDSVYKMLKNSPKLQVFEV---------VSNG 163
              E   ++PEF NL H+ L        W  V ++++  P LQ+ ++           + 
Sbjct: 414 EHKEEANLIPEFQNLTHLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRDDE 473

Query: 164 GSFVPDPHIVPECLTSQFRKCSVEYYNGT 192
           G+  P P  VP  ++   + C +  Y G+
Sbjct: 474 GADWPFPRSVPSSISLHLKTCFIRCYGGS 502


>Glyma13g43040.1 
          Length = 248

 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 15/132 (11%)

Query: 40  HLEQVKFTRYQNL-TELFHGCPILQDLKAHDIDYDQQDTFCVE-EIKSLPKLLTADLHYQ 97
           HL  V F++  N   EL  GCP L+D+   ++ Y    +  +E + K LPKL+ A ++  
Sbjct: 88  HLPHVFFSQNINFFGELLSGCPNLEDM---ELKYLGSTSNAIEAKFKKLPKLVRAVMNKD 144

Query: 98  WFDIYIPLKAVCNVEYLSITKFPKV--EVVPEFPNLMHMNL----HLLSWDSVYKMLKNS 151
                IPL+ V NV++L I    K+  +++PEF NL  +      H  +W  V K+LK+ 
Sbjct: 145 ----QIPLEVVHNVQFLRINWRVKINEDLIPEFHNLTRIEFSYSEHNRNWMEVLKVLKHC 200

Query: 152 PKLQVFEVVSNG 163
           P LQ   +  N 
Sbjct: 201 PNLQHLVIDQNA 212