Miyakogusa Predicted Gene
- Lj0g3v0314899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0314899.1 tr|E4V2B9|E4V2B9_ARTGP Nucleolar complex protein
2 OS=Arthroderma gypseum (strain ATCC MYA-4604 / CB,29.44,4e-19,RAD4
PROTEIN RELATED,NULL; NUCLEOLAR COMPLEX 2 AND
RAD4-RELATED,Uncharacterised protein family UPF01,CUFF.21274.1
(225 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g23890.1 376 e-104
Glyma05g11640.1 316 1e-86
Glyma17g23890.2 303 9e-83
Glyma15g04450.1 149 3e-36
Glyma13g41010.1 105 4e-23
>Glyma17g23890.1
Length = 549
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/226 (79%), Positives = 199/226 (88%), Gaps = 1/226 (0%)
Query: 1 MSVQIINGVALLFPGPRYLPLRLRCIQWLNHLACSSGVFIPVTSLVLDVLEYKITKDGGK 60
M VQIINGVALLFPGPRYLPLRLRCIQWLN L+ SSGVFIPVTSLVLDVLEYKITKD GK
Sbjct: 324 MIVQIINGVALLFPGPRYLPLRLRCIQWLNKLSGSSGVFIPVTSLVLDVLEYKITKDSGK 383
Query: 61 PGKVFEPLSS-VKLPKHWLKSQDFQEECVLSAIELLSEHFAQWSYHLSFPELAIAPLIHL 119
GKV +P+S+ +KLPKHWLKS+ FQEECV SAIELLSEHFAQWSYH+SFPELA APLIHL
Sbjct: 384 SGKVLQPMSTTIKLPKHWLKSRGFQEECVSSAIELLSEHFAQWSYHISFPELATAPLIHL 443
Query: 120 KKLFERTSIESLKRVIKRFIDQVELNVDYVQKKRDEVPFSPKDQQSVESFLQAEKRNGNT 179
KK+ ERTS+ES +RVIKRFIDQVELN+ +VQKKR+EVPFSPKDQQSVESFLQ EKRNGNT
Sbjct: 444 KKVSERTSVESFRRVIKRFIDQVELNIGFVQKKREEVPFSPKDQQSVESFLQVEKRNGNT 503
Query: 180 PFTQYYKSIMSKAASRKVISNXXXXXXXXXXMQHPNGTVDVITSDS 225
PFTQYYKSIM+KA+SRK ISN MQHPNG +DV+ ++S
Sbjct: 504 PFTQYYKSIMNKASSRKSISNRKSSGKGKKKMQHPNGNIDVVATES 549
>Glyma05g11640.1
Length = 632
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/200 (78%), Positives = 171/200 (85%), Gaps = 13/200 (6%)
Query: 1 MSVQIINGVALLFPGPRYLPLRLRCIQWLNHLACSSGVFIPVTSLVLDVLEYKITKDGGK 60
M VQIIN VALLFPGPRYLPLRLRCI WLN+L+ SSGVFIPVTSLVLDVLEYKITKD GK
Sbjct: 394 MIVQIINEVALLFPGPRYLPLRLRCIHWLNNLSGSSGVFIPVTSLVLDVLEYKITKDSGK 453
Query: 61 PGKVFEPLSSVKLPKHWLKSQDFQEECVLSAIELLSEHFAQWSYHLSFPELAIAPLIHLK 120
PGKV +P+S+ +CV SAIELL EHFA+WSYH+SFPELA APLI LK
Sbjct: 454 PGKVLQPMSTTI-------------KCVSSAIELLMEHFAKWSYHISFPELATAPLIQLK 500
Query: 121 KLFERTSIESLKRVIKRFIDQVELNVDYVQKKRDEVPFSPKDQQSVESFLQAEKRNGNTP 180
K+FERTS+ES KRVIKRFIDQVELN+ +VQKKR+EVPFSPKDQQSVESFLQ EKRNGNTP
Sbjct: 501 KVFERTSVESFKRVIKRFIDQVELNIGFVQKKREEVPFSPKDQQSVESFLQVEKRNGNTP 560
Query: 181 FTQYYKSIMSKAASRKVISN 200
FTQYYKSIMSKA+SRK IS+
Sbjct: 561 FTQYYKSIMSKASSRKSISH 580
>Glyma17g23890.2
Length = 503
Score = 303 bits (776), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 146/173 (84%), Positives = 159/173 (91%), Gaps = 1/173 (0%)
Query: 1 MSVQIINGVALLFPGPRYLPLRLRCIQWLNHLACSSGVFIPVTSLVLDVLEYKITKDGGK 60
M VQIINGVALLFPGPRYLPLRLRCIQWLN L+ SSGVFIPVTSLVLDVLEYKITKD GK
Sbjct: 324 MIVQIINGVALLFPGPRYLPLRLRCIQWLNKLSGSSGVFIPVTSLVLDVLEYKITKDSGK 383
Query: 61 PGKVFEPLSS-VKLPKHWLKSQDFQEECVLSAIELLSEHFAQWSYHLSFPELAIAPLIHL 119
GKV +P+S+ +KLPKHWLKS+ FQEECV SAIELLSEHFAQWSYH+SFPELA APLIHL
Sbjct: 384 SGKVLQPMSTTIKLPKHWLKSRGFQEECVSSAIELLSEHFAQWSYHISFPELATAPLIHL 443
Query: 120 KKLFERTSIESLKRVIKRFIDQVELNVDYVQKKRDEVPFSPKDQQSVESFLQA 172
KK+ ERTS+ES +RVIKRFIDQVELN+ +VQKKR+EVPFSPKDQQSVESFLQ
Sbjct: 444 KKVSERTSVESFRRVIKRFIDQVELNIGFVQKKREEVPFSPKDQQSVESFLQV 496
>Glyma15g04450.1
Length = 594
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 119/192 (61%), Gaps = 3/192 (1%)
Query: 3 VQIINGVALLFPGPRYLPLRLRCIQWLNHLACSSGVFIPVTSLVLDVLEYKITKD--GGK 60
QII+G A L P RY PLRLRC++ LN +A S+ FIPV+ L+LD+LE K G
Sbjct: 285 TQIISGAARLVPTARYFPLRLRCVRMLNQIAASTHSFIPVSMLLLDMLEMKELNRPPTGG 344
Query: 61 PGKVFEPLSSVKLPKHWLKSQDFQEECVLSAIELLSEHFAQWSYHLSFPELAIAPLIHLK 120
GK + S +K+ K LK++ FQE CV+S +E L+EH AQWSY ++F EL+ PL+ L+
Sbjct: 345 VGKAVDLRSILKVSKLTLKTRAFQEACVISVVEELAEHLAQWSYSVAFLELSFIPLVRLR 404
Query: 121 KLFERTSIESLKRVIKRFIDQVELNVDYVQKKRDEVPFSPKDQQSVESFLQAEKRNGNTP 180
+ T +E ++ +++ I Q+E + DY+ KR + F P D + SFL+ EK+ ++
Sbjct: 405 SFCKSTRVERFRKEMRQLICQIEASSDYLNGKRLSISFLPNDPAAA-SFLEDEKKPASSA 463
Query: 181 FTQYYKSIMSKA 192
++Y ++ +A
Sbjct: 464 LSKYVVTLHQRA 475
>Glyma13g41010.1
Length = 563
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 93/153 (60%), Gaps = 3/153 (1%)
Query: 42 VTSLVLDVLEYKITKD--GGKPGKVFEPLSSVKLPKHWLKSQDFQEECVLSAIELLSEHF 99
V+ L+LD+LE K G GK + S +K+ K LK++ FQE CV+S +E L+EH
Sbjct: 290 VSMLLLDMLEMKELNRPPTGGVGKAVDLHSILKVSKLTLKTRAFQEACVISVVEELAEHL 349
Query: 100 AQWSYHLSFPELAIAPLIHLKKLFERTSIESLKRVIKRFIDQVELNVDYVQKKRDEVPFS 159
AQWSY ++F EL+ PL+ L+ + T +E ++ +++ I Q+E + DYV KR + F
Sbjct: 350 AQWSYSVAFLELSFIPLVRLRSFCKSTKVERFRKEMRQLIRQIEASSDYVNGKRLSISFF 409
Query: 160 PKDQQSVESFLQAEKRNGNTPFTQYYKSIMSKA 192
P D + SFL+ EK++ ++ ++Y ++ +A
Sbjct: 410 PNDPAAA-SFLEDEKKSASSALSKYVMTLRQRA 441