Miyakogusa Predicted Gene

Lj0g3v0314369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0314369.1 Non Chatacterized Hit- tr|B4FDL5|B4FDL5_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,58.44,1e-18,uppS:
di-trans,poly-cis-decaprenylcistransferase,
Di-trans-poly-cis-decaprenylcistransferase-like; Up,CUFF.21227.1
         (355 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g33130.1                                                       583   e-167
Glyma16g22500.1                                                       513   e-145
Glyma10g00580.1                                                       302   4e-82
Glyma14g37210.1                                                        92   6e-19
Glyma14g37190.1                                                        90   3e-18
Glyma02g39110.1                                                        86   5e-17

>Glyma09g33130.1 
          Length = 362

 Score =  583 bits (1503), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 282/362 (77%), Positives = 311/362 (85%), Gaps = 7/362 (1%)

Query: 1   MQKSTGGITSHLLEGLCCYLRRCVFAILSVGPVPNHIAFIMDGNRRYAKKRNLGEGDGHR 60
           MQK++G I  H L GL  YLRRC+FAILSVGPVP+HIAFIMDGNRRYAKKRN+ EGDGH+
Sbjct: 1   MQKTSGNIIGHFLGGLYYYLRRCMFAILSVGPVPSHIAFIMDGNRRYAKKRNMEEGDGHK 60

Query: 61  AGFAALLSILRYCYELRVRYVTVYAFSIDNFKRKPKEVETFMELMREKIEELLQQESIIN 120
           AGF AL+SILRYCYEL V+YVTVYAFSIDNFKRKP EV++ MELMREKIEELL QES+IN
Sbjct: 61  AGFTALMSILRYCYELGVKYVTVYAFSIDNFKRKPNEVQSLMELMREKIEELLLQESLIN 120

Query: 121 EYGVRLHFIGNLQLLADPVRHAVEKAMRVTAHNKERVLLICVAYTSRDEIVHAVEESCKD 180
           EYGVRLHFIG+LQLL +PVR +VEKAMRVTAHN +RVLLICVAYTSR EIVHAV+E CK+
Sbjct: 121 EYGVRLHFIGDLQLLTEPVRASVEKAMRVTAHNNQRVLLICVAYTSRHEIVHAVQECCKE 180

Query: 181 KWNEVQASKEAKVSNDAFARINEGQERNGLDLHFQDSG------TKICSRIVDRVEG-GV 233
           KWNEVQASKEAK++N AFARI++G + NG DL FQDS       TK CS +   V+G G 
Sbjct: 181 KWNEVQASKEAKLTNGAFARIDQGLKGNGFDLLFQDSSKDYQNVTKACSSVPKGVQGAGE 240

Query: 234 KDGLLEHNAEKHDCNYSEAEITSCNGLVEITEERRYKQSGLPSIKLVDVEKHMYMAVAPD 293
           KDG+LEH  EKH  N SEAEIT CN L E+TEER+YKQ  +P IKLVD+EKHMYMAVAPD
Sbjct: 241 KDGMLEHTVEKHSENNSEAEITLCNELFEMTEERKYKQGDVPLIKLVDIEKHMYMAVAPD 300

Query: 294 PDIFIRTSGVARLSNFLLWQTSTCPLYAPKALWPEIGLRHLVWAVLNFQRHHFYLEKKKK 353
           PDI IRTSG ARLSNFLLWQTSTCPLYAP ALWPEIGLRHLVWAVLNFQRHHFYLEKKKK
Sbjct: 301 PDILIRTSGEARLSNFLLWQTSTCPLYAPTALWPEIGLRHLVWAVLNFQRHHFYLEKKKK 360

Query: 354 QF 355
           QF
Sbjct: 361 QF 362


>Glyma16g22500.1 
          Length = 304

 Score =  513 bits (1321), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 251/355 (70%), Positives = 277/355 (78%), Gaps = 51/355 (14%)

Query: 1   MQKSTGGITSHLLEGLCCYLRRCVFAILSVGPVPNHIAFIMDGNRRYAKKRNLGEGDGHR 60
           MQKS+G I  H L GL CYLRRC+FAILSVGPVP+HIAFIMDGNRRYAKKRN+ EGDGH+
Sbjct: 1   MQKSSGNIIGHFLGGLYCYLRRCMFAILSVGPVPSHIAFIMDGNRRYAKKRNMEEGDGHK 60

Query: 61  AGFAALLSILRYCYELRVRYVTVYAFSIDNFKRKPKEVETFMELMREKIEELLQQESIIN 120
           AGF AL+SILRYCYEL V+YVTVYAFSIDNFKRKP EV++ MELMREKIEELLQQES+IN
Sbjct: 61  AGFTALMSILRYCYELGVKYVTVYAFSIDNFKRKPNEVQSLMELMREKIEELLQQESLIN 120

Query: 121 EYGVRLHFIGNLQLLADPVRHAVEKAMRVTAHNKERVLLICVAYTSRDEIVHAVEESCKD 180
           EYGVRLHFIG+LQLL +PV  +VEKAMRVTAHN +RVLL+C+AYTSR E+VHAV+E CK+
Sbjct: 121 EYGVRLHFIGDLQLLTEPVIASVEKAMRVTAHNNQRVLLVCIAYTSRHEMVHAVQECCKE 180

Query: 181 KWNEVQASKEAKVSNDAFARINEGQERNGLDLHFQDSGTKICSRIVDRVEGGVKDGLLEH 240
           KWNEVQASKEAK++N                                             
Sbjct: 181 KWNEVQASKEAKLTNG-------------------------------------------- 196

Query: 241 NAEKHDCNYSEAEITSCNGLVEITEERRYKQSGLPSIKLVDVEKHMYMAVAPDPDIFIRT 300
                  N SEAEITSCN LVE+TEER+Y Q  +P IKLVD+EKHMYMAVAPDPDI IRT
Sbjct: 197 -------NDSEAEITSCNELVEMTEERKYNQGDVPLIKLVDIEKHMYMAVAPDPDILIRT 249

Query: 301 SGVARLSNFLLWQTSTCPLYAPKALWPEIGLRHLVWAVLNFQRHHFYLEKKKKQF 355
           SG ARLSNFLLWQTSTCPLYAP ALWPEIGLRHLVWAVLNFQRHHFYLEKK+KQF
Sbjct: 250 SGEARLSNFLLWQTSTCPLYAPTALWPEIGLRHLVWAVLNFQRHHFYLEKKRKQF 304


>Glyma10g00580.1 
          Length = 224

 Score =  302 bits (773), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 162/272 (59%), Positives = 187/272 (68%), Gaps = 56/272 (20%)

Query: 41  MDGNRRYAKKRNLGEGDGHRAGFAALLSILRYCYELRVRYVTVYAFSIDNFKRKPKEVET 100
           MDGNRRYAKKRN+ EGDGH+AGF AL+SILRYCYEL V+              +PKEV++
Sbjct: 1   MDGNRRYAKKRNMEEGDGHKAGFTALMSILRYCYELGVK--------------RPKEVQS 46

Query: 101 FMELMREKIEELLQQESIINEYGVRLHFIGNLQLLADPVRHAVEKAMRVTAHNKERVLLI 160
            MELMREKIEELL+QES+INEYGVRLHFIG++QLL +PVR A+EKAMRVTAHN +RVLLI
Sbjct: 47  LMELMREKIEELLKQESLINEYGVRLHFIGDMQLLTEPVRVALEKAMRVTAHNNQRVLLI 106

Query: 161 CVAYTSRDEIVHAVEE--SCKDKWNEVQASKEAKVSNDAFARINEGQERNGLDLHFQDSG 218
           CVAYTSR EIVHAV+E  SCKD  N                                   
Sbjct: 107 CVAYTSRHEIVHAVQEFYSCKDYLN----------------------------------A 132

Query: 219 TKICSRIVDRVEG-GVKDGLLEHNAEKHDCNYSEAEITSCNGLVEITEERRYKQSGLPSI 277
           TK CS + +RVEG G KDG+LEH  EKH  N SEAEITSCN +VE+TEE       +P +
Sbjct: 133 TKACSSVPNRVEGAGEKDGMLEHTVEKHSGNNSEAEITSCNEMVEMTEE-----GEVPFV 187

Query: 278 KLVDVEKHMYMAVAPDPDIFIRTSGVARLSNF 309
           KLVD+EK+MYMAVAPDPDI IRTSG A+   F
Sbjct: 188 KLVDIEKNMYMAVAPDPDILIRTSGEAQTQQF 219


>Glyma14g37210.1 
          Length = 307

 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 87/311 (27%)

Query: 33  VPNHIAFIMDGNRRYAKKRNLGEGDGHRAGFAALLSILRYCYELRVRYVTVYAFSIDNFK 92
           +P H+A I+DG+ R+AK R L    GH+AG   L +++R C    ++ +TV+  S +N+ 
Sbjct: 73  MPKHVAVIIDGHGRWAKLRGLPASAGHQAGVQPLRTVVRLCCSWGIQVLTVFVLSTENWF 132

Query: 93  RKPKEVETFMELMREKIEELLQQESIINEYGVRLHFIGNLQLLADPVRHAVEKAMRVTAH 152
           R   EV++ M+L    I   +   + + + G++++ IG+   L +        ++R T  
Sbjct: 133 RPKVEVDSLMKLFETTINSSI---ACMKKEGIQIYVIGDSSKLPE--------SLRSTIA 181

Query: 153 NKERVLLICVAYTSRDEIVHAVEESCKDKWNEVQASKEAKVSNDAFARINEGQERNGLDL 212
           N E+       + SR +++ A+      K++ VQA K                       
Sbjct: 182 NAEK----STKHNSRLQLIVAMNYG--GKYDVVQACKS---------------------- 213

Query: 213 HFQDSGTKICSRIVDRVEGGVKDGLLEHNAEKHDCNYSEAEITSCNGLVEITEERRYKQS 272
                           V   VKDGLL      H  N +E                     
Sbjct: 214 ----------------VAKKVKDGLL------HLDNINE--------------------- 230

Query: 273 GLPSIKLVDVEKHMYMAVAPDPDIFIRTSGVARLSNFLLWQTSTCPLYAPKALWPEIGLR 332
                K+++ E        P PD+ IR  G  RLSNFLLWQ +    Y  K  WP+ G  
Sbjct: 231 -----KIIEKELETKCTEFPYPDLLIRAGGELRLSNFLLWQLAYTEFYFNKTPWPDFGKE 285

Query: 333 HLVWAVLNFQR 343
             V A+ +FQ+
Sbjct: 286 EFVDALRSFQQ 296


>Glyma14g37190.1 
          Length = 322

 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 3/154 (1%)

Query: 26  AILSVGPVPNHIAFIMDGNRRYAKKRNLGEGDGHRAGFAALLSILRYCYELRVRYVTVYA 85
           A L+   +P H+A IMDGN R+AK + L    GH+AG  +L  ++R C    ++ +TV+A
Sbjct: 82  AELAAEMMPKHVAVIMDGNGRWAKVKGLPPSAGHQAGVQSLRKMVRLCCSWGIKVLTVFA 141

Query: 86  FSIDNFKRKPKEVETFMELMREKIEELLQQESIINEYGVRLHFIGNLQLLADPVRHAVEK 145
           FS DN+ R   EV+  M L    I   +Q        G+R+  IG+   L + ++  +  
Sbjct: 142 FSTDNWVRPKVEVDFLMRLFERTINSEVQ---TFKREGIRISVIGDSSRLPESLKRMIAS 198

Query: 146 AMRVTAHNKERVLLICVAYTSRDEIVHAVEESCK 179
           A   T  N    L++ V Y+ + ++V A +   K
Sbjct: 199 AEEDTKQNSRFQLIVAVGYSGKYDVVQACKSVAK 232



 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 34/54 (62%)

Query: 292 PDPDIFIRTSGVARLSNFLLWQTSTCPLYAPKALWPEIGLRHLVWAVLNFQRHH 345
           P PD+ IRTSG  R+SNFLLWQ +   LY  + LWP+ G    V A+ +FQ+  
Sbjct: 261 PYPDLLIRTSGELRVSNFLLWQLAYTELYFNRELWPDFGKDEFVDALSSFQQRQ 314


>Glyma02g39110.1 
          Length = 250

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 3/154 (1%)

Query: 26  AILSVGPVPNHIAFIMDGNRRYAKKRNLGEGDGHRAGFAALLSILRYCYELRVRYVTVYA 85
           A L+   +P H+A IMDGN R+AK + L    GH+AG  +L  ++R C    ++ +TV+A
Sbjct: 13  AELAAEMMPKHVAVIMDGNGRWAKVKGLPPSAGHQAGVQSLRRMVRLCSSWGIKVLTVFA 72

Query: 86  FSIDNFKRKPKEVETFMELMREKIEELLQQESIINEYGVRLHFIGNLQLLADPVRHAVEK 145
           FS DN+ R   E +  M L    I   +Q        G+++  IG+   L + ++  +  
Sbjct: 73  FSTDNWVRPKLEFDFLMRLFETTINSEVQA---FKREGIQISVIGDSSKLPESLKRMIVS 129

Query: 146 AMRVTAHNKERVLLICVAYTSRDEIVHAVEESCK 179
               T HN    L++ ++Y+ + ++V A +   K
Sbjct: 130 VEEDTKHNSRLQLIVALSYSGKYDVVQACKSVAK 163



 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 34/52 (65%)

Query: 292 PDPDIFIRTSGVARLSNFLLWQTSTCPLYAPKALWPEIGLRHLVWAVLNFQR 343
           P PD+ IRTSG  R+SNFLLWQ +   LY  + LWP+ G    V A+ +FQ+
Sbjct: 192 PYPDLLIRTSGELRVSNFLLWQLAYTELYFNQKLWPDFGKDEFVDALSSFQQ 243