Miyakogusa Predicted Gene

Lj0g3v0314179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0314179.1 Non Chatacterized Hit- tr|I3SQ21|I3SQ21_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,38.2,0.00000002,
,CUFF.21207.1
         (97 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46320.1                                                        56   8e-09
Glyma08g46580.1                                                        55   1e-08
Glyma18g35330.1                                                        51   3e-07
Glyma18g35370.1                                                        49   1e-06
Glyma13g35370.1                                                        49   2e-06
Glyma06g33870.1                                                        46   7e-06

>Glyma08g46320.1 
          Length = 379

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 4/83 (4%)

Query: 6   QNLDLLKISCKIPFS----IFSCTTLVVLKLEMVYFREYSRVHLPSLKTLHLTSLSFPTL 61
           + L+ L+I    PF     I +C TLVVLKL          VHLP+LKTLHL + +    
Sbjct: 112 RGLEHLQIEMPRPFELPNIILNCKTLVVLKLYRFRVNALGLVHLPALKTLHLDNFTMLET 171

Query: 62  KYFIEVIYGCPILEDFKVKHVYY 84
            +  +V++ CPILED +  ++++
Sbjct: 172 WHLAKVLHECPILEDLRANNMFF 194


>Glyma08g46580.1 
          Length = 192

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 3/88 (3%)

Query: 1   MRGQVQNLDL-LKISCKIPFSIFSCTTLVVLKLEMVYFREYSR--VHLPSLKTLHLTSLS 57
           ++ +VQ L+L L  +  +P  I + TTLVVLKL  +     S   V LPSLK LHL  + 
Sbjct: 101 IQRKVQRLELSLPSTINLPCCILTSTTLVVLKLSGLTVNRVSSSPVDLPSLKALHLRRVH 160

Query: 58  FPTLKYFIEVIYGCPILEDFKVKHVYYS 85
           F  L++ ++++  CP+LED  ++ ++ +
Sbjct: 161 FLELRWLLQILSACPLLEDLLIRSLHVT 188


>Glyma18g35330.1 
          Length = 342

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 1   MRGQVQNLDLLKIS-CKIPFSIFSCTTLVVLKLE-MVYFREYSRVHLPSLKTLHLTSLSF 58
           + G+V++L LL  S   +P  I + TTLV LKL+ +      S V LPSLKTLHL  + F
Sbjct: 80  IHGKVKHLSLLLPSDLNLPCCILTSTTLVDLKLKGLTLNSRVSSVDLPSLKTLHLRKVHF 139

Query: 59  PTLKYFIEVIYGCPILEDFKVKHVY 83
              +  ++++  CP+LED  ++ ++
Sbjct: 140 VEPRLLLQILSACPLLEDLLIRSLH 164


>Glyma18g35370.1 
          Length = 409

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 17  IPFSIFSCTTLVVLKLEMVYFREYSR--VHLPSLKTLHLTS-LSFPTLKYFIEVIYGCPI 73
           +P  +F C T+ V+KL  V+    +   V LP LK LH+   + F    Y ++++ GCP 
Sbjct: 141 LPRCLFHCDTVSVMKLNGVFLNALASFSVSLPLLKVLHVGDRVLFGCHDYVVKLLAGCPA 200

Query: 74  LEDFKVKHVYYSRCLFVLCGSPN 96
           LED  ++  Y   C  V+C   N
Sbjct: 201 LEDLVLESTYNDACGGVVCAEGN 223


>Glyma13g35370.1 
          Length = 270

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 9/81 (11%)

Query: 5   VQNLDLLKISCK------IPFSIFSCTTLVVLKLEM---VYFREYSRVHLPSLKTLHLTS 55
            QNL+ + + C       +P ++F+C T+ VLKL +   +     S +HLPSLK LH+  
Sbjct: 77  AQNLEEMDLICNYYFEVTLPNTLFTCKTISVLKLSLGLTINLNNISSIHLPSLKVLHVDV 136

Query: 56  LSFPTLKYFIEVIYGCPILED 76
           L     +  + +  GCP+LE+
Sbjct: 137 LYLVDDESIMRLFSGCPVLEE 157


>Glyma06g33870.1 
          Length = 196

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query: 43  VHLPSLKTLHLTSLSFPTLKYFIEVIYGCPILEDFKVKHV 82
           VHLP+LKTL L   +    +Y +EV++GCPILED +V ++
Sbjct: 90  VHLPALKTLLLDYFNMLETRYIVEVLHGCPILEDLQVNYL 129