Miyakogusa Predicted Gene
- Lj0g3v0314129.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0314129.1 tr|Q1W5W3|Q1W5W3_LOTJA Adenylate
isopentenyltransferase OS=Lotus japonicus GN=IPT3 PE=2
SV=1,94.55,0,CYTOKININ SYNTHASE,NULL; TRNA
DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED,tRNA
isopentenyl,NODE_48233_length_672_cov_9.837797.path2.1
(158 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g16750.1 228 2e-60
Glyma10g03060.1 223 9e-59
Glyma03g30850.1 198 2e-51
Glyma19g33680.1 184 4e-47
Glyma07g38620.1 131 3e-31
Glyma17g02080.1 130 8e-31
Glyma15g11040.1 129 2e-30
Glyma13g27990.1 118 3e-27
Glyma18g53460.1 107 4e-24
Glyma10g41990.1 102 2e-22
Glyma20g25050.1 100 9e-22
Glyma08g48020.1 89 2e-18
Glyma11g19330.1 87 6e-18
Glyma12g09140.1 81 5e-16
>Glyma02g16750.1
Length = 338
Score = 228 bits (582), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/168 (64%), Positives = 135/168 (80%), Gaps = 10/168 (5%)
Query: 1 MPVLDSYVAARVDQMLRSGMVEELRPFFNANGDYSRGIRRAIGVPEFDEYFRREGFADEE 60
M VL SYVA RVD M GMV+ELRPF++ NGDYSRG++RAIGVPEF EYF RE ADEE
Sbjct: 171 MSVLKSYVADRVDHMFYKGMVDELRPFYSPNGDYSRGVKRAIGVPEFHEYFGREEVADEE 230
Query: 61 TRKLLLERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRKRGEEADEAWR 120
T++ LLE+AV+E+K+NTCKLA +QLGKI+RLRNVKRW IHR+DATPVFR RGEEA++AW+
Sbjct: 231 TKQRLLEQAVKEIKLNTCKLAMKQLGKIRRLRNVKRWHIHRLDATPVFRMRGEEANDAWK 290
Query: 121 KVVAEPSAMIVAQFLYK----------ANGGFRVPAGSTESVMAAATC 158
++VA+PSA+IVA+FLY + G RV ++ESV+AAATC
Sbjct: 291 RLVAKPSALIVARFLYNNNSKNNANVVSGSGLRVQPAASESVLAAATC 338
>Glyma10g03060.1
Length = 315
Score = 223 bits (567), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/158 (72%), Positives = 134/158 (84%), Gaps = 6/158 (3%)
Query: 1 MPVLDSYVAARVDQMLRSGMVEELRPFFNANGDYSRGIRRAIGVPEFDEYFRREGFADEE 60
MP L SYVA RVD ML +GMV+ELRPF++ NGDYSRG+RRAIGVPEFDEYFRRE +E
Sbjct: 148 MPDLQSYVAERVDDMLYNGMVDELRPFYSPNGDYSRGVRRAIGVPEFDEYFRREEEVVDE 207
Query: 61 -TRKLLLERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRKRGEEADEAW 119
TR LLE AV+EMK+NTCKLA +QLGKI+RLRNVKRWEIHR+DATPVFR+RGEEA+EAW
Sbjct: 208 ETRTRLLEEAVKEMKLNTCKLAMKQLGKIRRLRNVKRWEIHRLDATPVFRRRGEEANEAW 267
Query: 120 RKVVAEPSAMIVAQFLYKANGGFRVPAGSTESVMAAAT 157
+K+VAEPSAMIVA+FLY PA S+E+V+AAAT
Sbjct: 268 KKLVAEPSAMIVARFLYNMK-----PATSSETVLAAAT 300
>Glyma03g30850.1
Length = 296
Score = 198 bits (504), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 90/134 (67%), Positives = 110/134 (82%)
Query: 3 VLDSYVAARVDQMLRSGMVEELRPFFNANGDYSRGIRRAIGVPEFDEYFRREGFADEETR 62
VL SYVA RVD ML GMV ELRPFF+ NGDYS+GIR+AIGVPEFD YFRRE F+ ETR
Sbjct: 162 VLHSYVAQRVDHMLGGGMVNELRPFFSPNGDYSKGIRKAIGVPEFDAYFRREAFSSNETR 221
Query: 63 KLLLERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRKRGEEADEAWRKV 122
LL+ AVR++K NTC LA +Q+G+I RLR+VK W+IHRV ATPVF+KRG+EA++AW+ +
Sbjct: 222 VSLLQDAVRDVKRNTCHLACKQIGRIHRLRSVKGWKIHRVCATPVFQKRGQEANDAWKNI 281
Query: 123 VAEPSAMIVAQFLY 136
VA+P A IV+ FLY
Sbjct: 282 VAQPCASIVSHFLY 295
>Glyma19g33680.1
Length = 284
Score = 184 bits (467), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 103/124 (83%)
Query: 2 PVLDSYVAARVDQMLRSGMVEELRPFFNANGDYSRGIRRAIGVPEFDEYFRREGFADEET 61
PVL SYVA RVDQM+ GMV ELRPFF+ NGDYS+GIR+AIGVPEF EYFRRE F+ E
Sbjct: 160 PVLHSYVAQRVDQMIGGGMVNELRPFFSPNGDYSKGIRKAIGVPEFHEYFRREAFSSTEM 219
Query: 62 RKLLLERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRKRGEEADEAWRK 121
R LL+ AVRE+K NTC LA +QLG+IQ LR+VK W+IHRV ATPVF+KRG+EA++AW+
Sbjct: 220 RMRLLQDAVREVKRNTCHLACKQLGRIQWLRSVKGWKIHRVCATPVFQKRGQEANDAWKN 279
Query: 122 VVAE 125
VVA+
Sbjct: 280 VVAQ 283
>Glyma07g38620.1
Length = 292
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 104/159 (65%), Gaps = 5/159 (3%)
Query: 1 MPVLDSYVAARVDQMLRSGMVEELRPFFN-ANGDYSRGIRRAIGVPEFDEYFRREG-FAD 58
+PVL S ++ARVD+M+ SG + E+R F N DY+ GIR+AIGVPEF ++FR E AD
Sbjct: 123 LPVLHSSLSARVDRMIHSGQLHEVRQSFQYHNQDYTLGIRKAIGVPEFHDFFRAEADGAD 182
Query: 59 EETRKLLLERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRKRG-EEADE 117
+ T++ LL+ A+ +K N C LA+RQL KI RL ++ + +HR+DAT VF K +EA+E
Sbjct: 183 QRTKQRLLQAAIASLKTNNCTLAKRQLQKIHRLYSMWKRNMHRLDATEVFLKTTRQEAEE 242
Query: 118 AWRKVVAEPSAMIVAQFLYKANGGFRVPAGSTESVMAAA 156
AW V + I+ +FLY+ VPAG V+A++
Sbjct: 243 AWEDHVLSKTRRILHKFLYEDT--HVVPAGIASVVIASS 279
>Glyma17g02080.1
Length = 311
Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 100/158 (63%), Gaps = 7/158 (4%)
Query: 1 MPVLDSYVAARVDQMLRSGMVEELRPFFN-ANGDYSRGIRRAIGVPEFDEYFRREG-FAD 58
+PVL S ++ARVD+M+ +G V E+R F N DY+ G+R+AIGVPEF ++FR E AD
Sbjct: 143 LPVLHSSLSARVDRMIHAGQVHEVRKSFQYHNDDYTVGLRKAIGVPEFHDFFRAEADGAD 202
Query: 59 EETRKLLLERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRK---RGEEA 115
E T++ LLE A+ +K N C LA RQ+ KI RL + + +HR+DAT VF K R EEA
Sbjct: 203 ERTKQRLLEAAIASLKTNNCSLANRQVQKIHRLYGMWKRNMHRLDATEVFLKNATRQEEA 262
Query: 116 DEAWRKVVAEPSAMIVAQFLYKANGGFRVPAGSTESVM 153
+EAW V S I+ +FLY+ PAG SV+
Sbjct: 263 EEAWEDHVLSKSRRILNKFLYEDT--HVAPAGIAASVV 298
>Glyma15g11040.1
Length = 342
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 105/162 (64%), Gaps = 10/162 (6%)
Query: 1 MPVLDSYVAARVDQMLRSGMVEELRPFFNAN-GDYSRGIRRAIGVPEFDEYFRRE--GFA 57
+PVL S + ARVD+M+ +G V E+R FF+ + DY++GIRRAIGVPEFD++ R E G
Sbjct: 171 LPVLHSSLQARVDRMIEAGQVNEVRDFFDPSVTDYTKGIRRAIGVPEFDDFLRAEANGRL 230
Query: 58 DEETRKLLLERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRKRGEEADE 117
DE T++ LL+ A+ +K+N C LA RQ+ KI RL + +HR+DAT VFR + +
Sbjct: 231 DERTKQRLLQAAIARLKINNCTLANRQIQKIHRLHAFWKRNMHRLDATEVFRG----SRD 286
Query: 118 AWRKVVAEPSAMIVAQFLY-KANGGFRVPAG--STESVMAAA 156
AWR V + +I+ +FLY + VPAG S + V+AAA
Sbjct: 287 AWRDHVLAKTLIILHKFLYGEKKTPHVVPAGIVSAKDVIAAA 328
>Glyma13g27990.1
Length = 211
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 91/143 (63%), Gaps = 9/143 (6%)
Query: 10 ARVDQMLRSGMVEELRPFFNAN-GDYSRGIRRAIGVPEFDEYFRRE--GFADEETRKLLL 66
ARVD+M+ +G V E+R FF+ + DY++GIRRAIGVPEFD++ R E G DE T++ LL
Sbjct: 53 ARVDRMIEAGQVNEVRQFFDPSVTDYTKGIRRAIGVPEFDDFLRAEANGGVDERTKQRLL 112
Query: 67 ERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRKRGEEADEAWRKVVAEP 126
E A+ +K+N C LA RQ+ KI RL + + +HR+DAT VF + +AW V
Sbjct: 113 EAAIARLKINNCTLANRQIQKIHRLHGLWKRNMHRLDATEVFLG----SRDAWHDHVLAK 168
Query: 127 SAMIVAQFLY--KANGGFRVPAG 147
S +++ +FLY K VPAG
Sbjct: 169 SLIVLHKFLYGEKKTPHHVVPAG 191
>Glyma18g53460.1
Length = 256
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 1 MPVLDSYVAARVDQMLRSGMVEELRPFFNANGDYSRGIRRAIGVPEFDEYFRREGFADEE 60
+PVL Y+ RVD+ML G+V+E+R F DYSRG+RRAIGVPE EYF E D+E
Sbjct: 124 LPVLFQYLDKRVDEMLDKGVVDEIRETFVPGADYSRGVRRAIGVPELGEYFLVEKKIDDE 183
Query: 61 TRK-LLLERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRK--RGEEADE 117
T+K +L+ A+ K NTCKLA QL KI ++ W + ++D+T VF +G +
Sbjct: 184 TKKEKMLQGAIARTKENTCKLAEAQLLKIHKMNYEFGWGMTKIDSTQVFEAVLKGMDYKH 243
Query: 118 AWRKVVAEPSAMI 130
+ ++V +PS I
Sbjct: 244 LYHEIVFKPSVDI 256
>Glyma10g41990.1
Length = 308
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 83/144 (57%), Gaps = 18/144 (12%)
Query: 1 MPVLDSYVAARVDQMLRSGMVEELRPFFNANGDYSR----GIRRAIGVPEFDEYFRR--- 53
PVL Y+ RVD ML SGMV+EL FF+ D +R GIR+AIGVPEFD +F +
Sbjct: 169 FPVLSQYLRDRVDDMLDSGMVDELAQFFDP--DAARRTGFGIRKAIGVPEFDRFFNKYPP 226
Query: 54 ---EGFADEETRKLLLERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFR- 109
+G D+ R+ E AV+ +K NTC+LA RQ+GKI+RL+ W++ R+DAT FR
Sbjct: 227 SMGQG-GDDPLRERAYEEAVKAIKDNTCELAERQIGKIERLKRAG-WDLRRIDATEAFRM 284
Query: 110 ---KRGEEADEAWRKVVAEPSAMI 130
W + V EPS I
Sbjct: 285 VLTSGSSNGSGVWERQVLEPSVKI 308
>Glyma20g25050.1
Length = 128
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 15 MLRSGMVEELRPFFNANGD--YSRGIRRAIGVPEFDEYFRRE----GFADEETRKLLLER 68
ML SGMV+EL FF+ + G+R+AIGVPEFD +F + G D+ R+ +
Sbjct: 1 MLNSGMVDELAQFFDQDAARRTGFGLRKAIGVPEFDRFFNKYPPSMGQGDDPLRESAYQE 60
Query: 69 AVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRKRGEEADEAWRKVVAEPSA 128
AVR +K NTC+LA RQ+GKI+RL+ W++ R+DAT FR + W + V EPS
Sbjct: 61 AVRAIKDNTCELAERQIGKIERLKRAG-WDLRRIDATEAFRGVLTSGSDVWERQVLEPSV 119
Query: 129 MIVAQFL 135
IV +FL
Sbjct: 120 KIVKRFL 126
>Glyma08g48020.1
Length = 246
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 7 YVAARVDQMLRSGMVEELRPFFNANGDYSRGIRRAIGVPEFDEYFRREG-FADEETRKLL 65
Y+ RVD+M+ +G+V+E++ F +YSRG+RRAI VPE EYF E +D+ ++ +
Sbjct: 120 YLDKRVDKMVDAGVVDEIQENFVPGANYSRGVRRAIRVPELGEYFLVEKEISDKAEKEKM 179
Query: 66 LERAVREMKVNTCKLARRQLGKIQRLRNVKRWEIHRVDATPVFRK--RGEEADEAWRKVV 123
L+ A+ K NTCKL QL KI R+ W + ++D+T VF +G + + +++
Sbjct: 180 LQHAIARTKENTCKLVEMQLLKIHRINYELGWGMTKIDSTVVFEAILKGVDYKNLYHEII 239
Query: 124 AEPSAMI 130
+PS I
Sbjct: 240 FKPSMEI 246
>Glyma11g19330.1
Length = 470
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 36/168 (21%)
Query: 1 MPVLDSYVAARVDQMLRSGMVEELRPFFNANGDYSRGIRRAIGVPEFDEYFR-------- 52
+PVLD YV RVD M+ G++ E+ +N N Y+RG+R+AIGV EF+ R
Sbjct: 225 LPVLDRYVEQRVDCMMHEGLLNEVYDIYNLNAVYTRGLRQAIGVREFEPLLRTCVVKDMH 284
Query: 53 ------REGFADEETRKL-------------------LLERAVREMKVNTCKLARRQLGK 87
EG + E+ L LLE A+ ++K+NT +L RRQ
Sbjct: 285 ERERELTEGSSIEKGETLFNHNLMELVRSSSNTESTILLEEAIEKVKLNTRRLIRRQKRM 344
Query: 88 IQRLRNVKRWEIHRVDATPVFRKRGEEADEAWRKVVAEPSAMIVAQFL 135
+ RL+ + W IH VD+T + E + W + V E + IV FL
Sbjct: 345 LSRLQTLFGWNIHYVDSTESISSKSE---DVWTRQVVESAVKIVKSFL 389
>Glyma12g09140.1
Length = 322
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 36/168 (21%)
Query: 3 VLDSYVAARVDQMLRSGMVEELRPFFNANGDYSRGIRRAIGVPEFDEYFRREGFADEETR 62
VLD YV RVD M+ G++ E+ +N N Y+RG+R+AIGV EF+ R D R
Sbjct: 117 VLDRYVEQRVDCMMYEGLLNEVYNIYNLNAVYTRGLRQAIGVREFEPLLRTCVVKDMYER 176
Query: 63 K---------------------------------LLLERAVREMKVNTCKLARRQLGKIQ 89
+ +LLE A+ ++K+NT +L RRQ +
Sbjct: 177 ERELTEGPSIEKGATLFNRNLMELVRSSSNTEPTILLEEAIEKVKLNTRRLVRRQKRMLS 236
Query: 90 RLRNVKRWEIHRVDATPVFRKRGEEADEAWRKVVAEPSAMIVAQFLYK 137
RL+ + W IH VD+T + E + W + V E + IV FL +
Sbjct: 237 RLQTLFGWNIHYVDSTESISSKSE---DVWTRQVVESAVEIVKSFLMR 281