Miyakogusa Predicted Gene

Lj0g3v0313489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0313489.1 tr|F1CZQ3|F1CZQ3_9LAMI Superoxide dismutase
OS=Haberlea rhodopensis GN=FSD PE=2
SV=1,54.05,0.00000000000002,seg,NULL; Fe,Mn superoxide dismutase
(SOD), C-terminal domain,Manganese/iron superoxide dismutase,
C,gene.g24438.t1.1
         (85 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g33880.1                                                        77   5e-15
Glyma10g33710.1                                                        72   1e-13
Glyma10g22680.1                                                        71   3e-13
Glyma02g09630.2                                                        70   7e-13
Glyma02g09630.1                                                        70   7e-13
Glyma20g12510.1                                                        51   2e-07

>Glyma20g33880.1 
          Length = 177

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 33/41 (80%), Positives = 39/41 (95%)

Query: 12  QHAYYLDYQNRRPDFISVFIDKLVSWDTVSSRLEQAKAIVA 52
           +HAYYLD+QNRRPD+ISVF+DKLVSWD VSSRLEQAKA++ 
Sbjct: 135 EHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALIT 175


>Glyma10g33710.1 
          Length = 244

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 31/37 (83%), Positives = 36/37 (97%)

Query: 12  QHAYYLDYQNRRPDFISVFIDKLVSWDTVSSRLEQAK 48
           +HAYYLD+QNRRPD+ISVF+DKLVSWD VSSRLEQA+
Sbjct: 207 EHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAR 243


>Glyma10g22680.1 
          Length = 272

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 12  QHAYYLDYQNRRPDFISVFIDKLVSWDTVSSRLEQAKAIVAXXXXXXXXXXXXXXXXXXX 71
           +HAY++D+QN+R D+ISVF+DKLVSWD VSSRLEQAKA++                    
Sbjct: 196 EHAYFIDFQNQRRDYISVFMDKLVSWDAVSSRLEQAKALIEEREREAERKRRDEEKPTSS 255

Query: 72  XXXPHEIFPDNDSD 85
              P EIF D+D+D
Sbjct: 256 EATP-EIFSDSDAD 268


>Glyma02g09630.2 
          Length = 310

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/74 (45%), Positives = 45/74 (60%)

Query: 12  QHAYYLDYQNRRPDFISVFIDKLVSWDTVSSRLEQAKAIVAXXXXXXXXXXXXXXXXXXX 71
           +HAY++D+QN+R D+ISVF+DKLVSWD VSSRLEQAKA++                    
Sbjct: 233 EHAYFIDFQNQRRDYISVFMDKLVSWDAVSSRLEQAKALIKEREREAERKRREEEEKRTS 292

Query: 72  XXXPHEIFPDNDSD 85
                EI+ D D+D
Sbjct: 293 SEAIPEIYSDGDAD 306


>Glyma02g09630.1 
          Length = 313

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/74 (45%), Positives = 45/74 (60%)

Query: 12  QHAYYLDYQNRRPDFISVFIDKLVSWDTVSSRLEQAKAIVAXXXXXXXXXXXXXXXXXXX 71
           +HAY++D+QN+R D+ISVF+DKLVSWD VSSRLEQAKA++                    
Sbjct: 236 EHAYFIDFQNQRRDYISVFMDKLVSWDAVSSRLEQAKALIKEREREAERKRREEEEKRTS 295

Query: 72  XXXPHEIFPDNDSD 85
                EI+ D D+D
Sbjct: 296 SEAIPEIYSDGDAD 309


>Glyma20g12510.1 
          Length = 262

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 29/40 (72%)

Query: 12  QHAYYLDYQNRRPDFISVFIDKLVSWDTVSSRLEQAKAIV 51
           +HAYYLDY+N R  ++ VF++ LVSWD    RL +A+A V
Sbjct: 213 EHAYYLDYRNDRAKYVDVFMNHLVSWDAAMGRLTRAEAFV 252