Miyakogusa Predicted Gene

Lj0g3v0313299.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0313299.2 Non Chatacterized Hit- tr|I1KD41|I1KD41_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,89.44,0,no
description,NULL; Helicase_C,Helicase, C-terminal; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NUL,CUFF.21152.2
         (540 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g22750.1                                                       869   0.0  
Glyma09g08180.1                                                        56   1e-07

>Glyma06g22750.1 
          Length = 756

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/466 (89%), Positives = 438/466 (93%), Gaps = 1/466 (0%)

Query: 75  MELANLPTLELFQNDGSPSARKLFILWNPILRPKDILKKAQFAIGNNELADESANFVRSS 134
           +ELANL TLELFQNDGSPS RKLF+LWNP LRPK I+KK QF+   +ELADESANFVRSS
Sbjct: 191 LELANLSTLELFQNDGSPSTRKLFVLWNPALRPKAIIKKTQFSKSTDELADESANFVRSS 250

Query: 135 PIVDVSRLFAEMVQHGLRCIAFCKSRKLCELVLCYTREILHDTAPHLVDSICAYRGGYIA 194
           PIVDVSRLFAEMVQHGLRCIAFCKSRKLCELVL Y REILH+TAPHLVDSICAYRGGYIA
Sbjct: 251 PIVDVSRLFAEMVQHGLRCIAFCKSRKLCELVLSYAREILHETAPHLVDSICAYRGGYIA 310

Query: 195 EERRKIESAFFGGKICGVAATNALELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRDR 254
           EERRKIES+FFGGKICGVAATNALELGIDVGEID TLHLGFPG+IASLWQQAGRGGRRDR
Sbjct: 311 EERRKIESSFFGGKICGVAATNALELGIDVGEIDATLHLGFPGNIASLWQQAGRGGRRDR 370

Query: 255 PSLAVYVAFGGPLDQYFMKNPKKLFERPIECCHIDSRNKQVLEQHMACAALEHPLNVHYD 314
           PSLAVYVAFGGPLDQYFMKNPKKLFERPIECCH+DS+NKQVLEQH+ CAA EHPL+V+YD
Sbjct: 371 PSLAVYVAFGGPLDQYFMKNPKKLFERPIECCHVDSQNKQVLEQHLVCAAHEHPLSVNYD 430

Query: 315 EKYFGSCLESVLISLKARGYLRFDLSSVPSSRIWHYIGPEKSPSQAVNIRAIETVRYSVI 374
           E+YFG CLESV+ISLKARGYL   LSS  SSRIW+YIGPEK PS AVNIRAIET+RYSVI
Sbjct: 431 EQYFGPCLESVIISLKARGYLSSVLSSD-SSRIWNYIGPEKLPSHAVNIRAIETLRYSVI 489

Query: 375 DQKKNEVLEEVEESKAFFQVYEGAVYMCQGKTYLVEKLDLSNKTAFCKEADLKYYTKTRD 434
           DQKKNEVLEE+EESKAFFQVYEGAVYM QGKTYLVEKLDLSNKTAFCKEADLKYYTKTRD
Sbjct: 490 DQKKNEVLEEIEESKAFFQVYEGAVYMYQGKTYLVEKLDLSNKTAFCKEADLKYYTKTRD 549

Query: 435 YTDIHVIGGNIAYPVKVSTNMLPKTNARAHVCKVTTTWFGFYRIWRGSNQIFDTVDLALP 494
           YTDIHVIGGNIAYPVKV TNM PKTNAR  VCKVTTTWFGFYRIWRGSNQIFD VDLALP
Sbjct: 550 YTDIHVIGGNIAYPVKVETNMFPKTNARVDVCKVTTTWFGFYRIWRGSNQIFDAVDLALP 609

Query: 495 QYSYESQAVWIPVPQSIKEAVVKQNYDFRGGLHAASHAVLHVVPLH 540
           QYSYESQAVW+PVPQSIKEAV KQNYDFRGGLHAASHA+LHVVPLH
Sbjct: 610 QYSYESQAVWVPVPQSIKEAVSKQNYDFRGGLHAASHAILHVVPLH 655


>Glyma09g08180.1 
          Length = 756

 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)

Query: 162 LCELVLCYTREILHDTAPHLVD---SICAYRGGYIAEERRKIESAFFGGKICGVAATNAL 218
           +C +V C  R +  D + +L     S  AY  G   + R  +   +   KI  V AT A 
Sbjct: 275 VCAIVYCLERSMCDDLSTNLSQNGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAF 334

Query: 219 ELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRDRPSLAV 259
            +GID  ++ +  H   P S+ + +Q++GR GR   PS ++
Sbjct: 335 GMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSL 375