Miyakogusa Predicted Gene

Lj0g3v0313219.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0313219.2 Non Chatacterized Hit- tr|D7KNH9|D7KNH9_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,34.45,2e-18,Bet
v1-like,NULL; DUF220,Protein of unknown function DUF220; FAMILY NOT
NAMED,NULL,CUFF.21148.2
         (338 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g39380.1                                                       553   e-158
Glyma18g19350.1                                                       541   e-154

>Glyma08g39380.1 
          Length = 334

 Score =  553 bits (1425), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 263/334 (78%), Positives = 296/334 (88%), Gaps = 4/334 (1%)

Query: 1   MDESEITKFSLNVKKDEKDGSPRGLNPAISKFFVQLPNKLQNILQSRLSRLAKQNGINWM 60
           M +SE+ KF L V K+EK+G PRGL+PAISKFFVQL    Q++++SRLSRLAKQ+G++ M
Sbjct: 2   MGDSEVAKFGLKVGKNEKNGFPRGLDPAISKFFVQL----QSVVKSRLSRLAKQDGMSLM 57

Query: 61  RSVQRNGDGSFDASEAELAEQLRAWKENPSWVDKPPQIKVTVPKGSLCSLNAEVDVGLPP 120
            SVQR GD SF  SEAEL EQL+AW+ENPSWVDKPP IKVT PKGSLC+L+ EVDVGLPP
Sbjct: 58  SSVQRKGDKSFSYSEAELNEQLQAWRENPSWVDKPPLIKVTAPKGSLCNLDVEVDVGLPP 117

Query: 121 GAVYNIVIDPDNRRVFKNIKEVLSRKVLVDEGHRQVVDLEQAAIWRFLWWSGTISINVLV 180
            AVYNIVIDPDNRRVFKNIKEV+SRKVLVDEGHRQVVDL+QAAIW+FLWWSGTISINVLV
Sbjct: 118 DAVYNIVIDPDNRRVFKNIKEVVSRKVLVDEGHRQVVDLDQAAIWKFLWWSGTISINVLV 177

Query: 181 DQNRKDYSMKFKQTKTGFMKKFEGCWRVEPLFVDEATCYPFKPVTKEDYNVCTRGKGRIG 240
           DQNRKD+SMKFKQTK GFMKKFEGCWRVEPLFVDEA C+PFKPVTKEDY  C RGKGRIG
Sbjct: 178 DQNRKDHSMKFKQTKAGFMKKFEGCWRVEPLFVDEAMCHPFKPVTKEDYYACARGKGRIG 237

Query: 241 SKVSLQQILQPAVVPPPPISWYLRGITARTTEMLVTDLVEETVRIRGGYEAEKSIEEEFG 300
           SKVSL+Q LQP++VPPPP+SWYLRGITARTTEML+ D++ ET RIRGGYEAEKS  EE  
Sbjct: 238 SKVSLKQTLQPSIVPPPPLSWYLRGITARTTEMLINDMLAETARIRGGYEAEKSKAEELQ 297

Query: 301 GKPGKNVDLIDNTSDIKERWILRRKNAKQGYRKL 334
           GKPG+NVDL+ NTSDIKERW LRR+NAK  +R+L
Sbjct: 298 GKPGENVDLVSNTSDIKERWKLRRENAKHSHRRL 331


>Glyma18g19350.1 
          Length = 329

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/334 (79%), Positives = 295/334 (88%), Gaps = 8/334 (2%)

Query: 1   MDESEITKFSLNVKKDEKDGSPRGLNPAISKFFVQLPNKLQNILQSRLSRLAKQNGINWM 60
           M +SE+TKF L V K+   G PRGL+PAISKFFVQL    Q +++S+LSRLAKQ+G++ M
Sbjct: 1   MGDSEMTKFGLKVGKN---GFPRGLDPAISKFFVQL----QIVVKSQLSRLAKQDGMSLM 53

Query: 61  RSVQRNGDGSFDASEAELAEQLRAWKENPSWVDKPPQIKVTVPKGSLCSLNAEVDVGLPP 120
           RSVQR G GSF  SEAEL EQL+AW+ENPSWVDKPP IKVTVPKGSLC+L+ EVDVGLPP
Sbjct: 54  RSVQRKG-GSFSYSEAELNEQLQAWRENPSWVDKPPLIKVTVPKGSLCNLDVEVDVGLPP 112

Query: 121 GAVYNIVIDPDNRRVFKNIKEVLSRKVLVDEGHRQVVDLEQAAIWRFLWWSGTISINVLV 180
            AVYNIVIDPDNRRVFKNIKEV+SRKVLVD+GHRQVVDL+QAAIW+FLWWSGTISINVLV
Sbjct: 113 DAVYNIVIDPDNRRVFKNIKEVVSRKVLVDQGHRQVVDLDQAAIWKFLWWSGTISINVLV 172

Query: 181 DQNRKDYSMKFKQTKTGFMKKFEGCWRVEPLFVDEATCYPFKPVTKEDYNVCTRGKGRIG 240
           DQNRKD+SMKF QTK GFMKKFEGCWRVEPLFVDEA C+PFKPVTKEDYN CTRGKGRIG
Sbjct: 173 DQNRKDHSMKFMQTKAGFMKKFEGCWRVEPLFVDEAMCHPFKPVTKEDYNACTRGKGRIG 232

Query: 241 SKVSLQQILQPAVVPPPPISWYLRGITARTTEMLVTDLVEETVRIRGGYEAEKSIEEEFG 300
           SKVSL+QILQP++VPPPP+SWYLRGITARTTEML+ D++ ET RIRGGYEAEKS  EE  
Sbjct: 233 SKVSLEQILQPSIVPPPPLSWYLRGITARTTEMLINDMLAETARIRGGYEAEKSKAEELQ 292

Query: 301 GKPGKNVDLIDNTSDIKERWILRRKNAKQGYRKL 334
            KPG+NVDL+ NTSDIKE W LRRKNAKQ +R L
Sbjct: 293 VKPGENVDLVSNTSDIKESWKLRRKNAKQSHRSL 326