Miyakogusa Predicted Gene

Lj0g3v0312999.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0312999.1 Non Chatacterized Hit- tr|I1M1F9|I1M1F9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,45.38,0.000000000000004, ,CUFF.21129.1
         (121 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g28980.1                                                        86   1e-17
Glyma15g10060.1                                                        67   5e-12

>Glyma13g28980.1 
          Length = 435

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 67/130 (51%), Gaps = 19/130 (14%)

Query: 10  TLSKLLYASILDMDYATSIFSDIQTPNLCLL--MLR------IPFCVSIVFVEELKMHIS 61
           TLSKLL ASILDMDY  SIFS IQTPNL +   MLR       P       V    +H  
Sbjct: 9   TLSKLLAASILDMDYVASIFSYIQTPNLFMFNTMLRGYSVSNFPNKAISATVNNALLHFH 68

Query: 62  CL-----------MSFLKGMTWSQPNSVFDLFTKMCWSGLRASAATVLILLPAACDAGDF 110
           C+             F +G      N++      +CW GL AS ATVL LL AA D G+F
Sbjct: 69  CVCKRIEDALKLFDEFPEGNDLVSWNTLMGGCVSVCWVGLDASVATVLSLLSAAGDIGNF 128

Query: 111 VVRKSLHGYC 120
            V KSLHGYC
Sbjct: 129 GVGKSLHGYC 138


>Glyma15g10060.1 
          Length = 540

 Score = 66.6 bits (161), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/49 (69%), Positives = 35/49 (71%)

Query: 73  SQPNSVFDLFTKMCWSGLRASAATVLILLPAACDAGDFVVRKSLHGYCI 121
           SQP  VF LF KMCW GL AS ATVL LL AA   G+F V KSLHGYCI
Sbjct: 188 SQPCLVFGLFRKMCWVGLEASVATVLSLLSAAGYIGNFGVGKSLHGYCI 236



 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/47 (65%), Positives = 33/47 (70%), Gaps = 9/47 (19%)

Query: 6  MVKT-------TLSKLLYASILDMDYATSIFSDIQTPNLCLL--MLR 43
          MVKT       TLSKLL ASI+DMDYA SIFS IQTPNL +   MLR
Sbjct: 34 MVKTGLDNVPFTLSKLLAASIIDMDYAASIFSYIQTPNLFMFNAMLR 80