Miyakogusa Predicted Gene

Lj0g3v0312509.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0312509.3 Non Chatacterized Hit- tr|B9S6B4|B9S6B4_RICCO
Ring finger protein, putative OS=Ricinus communis GN=R,67.61,3e-19,
,CUFF.21126.3
         (79 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23790.1                                                       112   1e-25
Glyma10g43120.1                                                       109   6e-25
Glyma10g43120.3                                                        96   1e-20
Glyma12g36650.2                                                        52   1e-07
Glyma12g36650.1                                                        52   1e-07
Glyma11g14110.2                                                        52   2e-07
Glyma11g14110.1                                                        52   2e-07
Glyma12g06090.1                                                        52   2e-07
Glyma13g27330.2                                                        51   3e-07
Glyma13g27330.1                                                        51   3e-07
Glyma13g20210.4                                                        46   8e-06
Glyma13g20210.3                                                        46   8e-06
Glyma13g20210.1                                                        46   8e-06
Glyma13g20210.2                                                        46   8e-06

>Glyma20g23790.1 
          Length = 335

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 60/72 (83%)

Query: 1   MDEHVNNSQDAREDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGSDQHG 60
           ++EH  NSQDA EDVD DELSYE+LLALGE VG ES GL TDTIA  PSV YKTGSDQHG
Sbjct: 220 IEEHGANSQDAWEDVDPDELSYEELLALGEAVGTESRGLSTDTIACLPSVNYKTGSDQHG 279

Query: 61  SNDSCVICRVGW 72
           SNDSCVICRV +
Sbjct: 280 SNDSCVICRVDY 291


>Glyma10g43120.1 
          Length = 344

 Score =  109 bits (273), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 60/72 (83%)

Query: 1   MDEHVNNSQDAREDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGSDQHG 60
           ++EH  NSQDA EDVD DELSYE+LLAL EVVG ES GL TDTIA  PSV YKTGSDQHG
Sbjct: 229 IEEHGANSQDAWEDVDPDELSYEELLALSEVVGTESRGLSTDTIACLPSVNYKTGSDQHG 288

Query: 61  SNDSCVICRVGW 72
           S+DSCVICRV +
Sbjct: 289 SHDSCVICRVDY 300


>Glyma10g43120.3 
          Length = 308

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/66 (75%), Positives = 54/66 (81%)

Query: 1   MDEHVNNSQDAREDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGSDQHG 60
           ++EH  NSQDA EDVD DELSYE+LLAL EVVG ES GL TDTIA  PSV YKTGSDQHG
Sbjct: 229 IEEHGANSQDAWEDVDPDELSYEELLALSEVVGTESRGLSTDTIACLPSVNYKTGSDQHG 288

Query: 61  SNDSCV 66
           S+DS V
Sbjct: 289 SHDSYV 294


>Glyma12g36650.2 
          Length = 247

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 7/81 (8%)

Query: 2   DEHVNNSQDA---REDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGS-- 56
           + H +NS      ++++D D ++YE+LL LGE VG +S GL  + I   P+ KYK G+  
Sbjct: 128 NHHESNSSSQVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFGNLF 187

Query: 57  DQHGSNDSCVICRVGWTMRTG 77
            +  S   CVIC++  T R G
Sbjct: 188 KRKNSGKRCVICQM--TYRRG 206


>Glyma12g36650.1 
          Length = 247

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 7/81 (8%)

Query: 2   DEHVNNSQDA---REDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGS-- 56
           + H +NS      ++++D D ++YE+LL LGE VG +S GL  + I   P+ KYK G+  
Sbjct: 128 NHHESNSSSQVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFGNLF 187

Query: 57  DQHGSNDSCVICRVGWTMRTG 77
            +  S   CVIC++  T R G
Sbjct: 188 KRKNSGKRCVICQM--TYRRG 206


>Glyma11g14110.2 
          Length = 248

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 6/75 (8%)

Query: 4   HVNNSQDAR----EDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGS--D 57
           H +NS D +    +++D D ++YE+LL LGE VG +S GL  + I+  P  KYK G    
Sbjct: 129 HHSNSNDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISSLPVSKYKCGFFLR 188

Query: 58  QHGSNDSCVICRVGW 72
           +   ++ CVIC++ +
Sbjct: 189 KKSRDERCVICQMEY 203


>Glyma11g14110.1 
          Length = 248

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 6/75 (8%)

Query: 4   HVNNSQDAR----EDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGS--D 57
           H +NS D +    +++D D ++YE+LL LGE VG +S GL  + I+  P  KYK G    
Sbjct: 129 HHSNSNDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISSLPVSKYKCGFFLR 188

Query: 58  QHGSNDSCVICRVGW 72
           +   ++ CVIC++ +
Sbjct: 189 KKSRDERCVICQMEY 203


>Glyma12g06090.1 
          Length = 248

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 6/75 (8%)

Query: 4   HVNNSQDAR----EDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGS--D 57
           H +NS D +    +++D D ++YE+LL LGE VG +S GL  + I+  P  KYK G    
Sbjct: 129 HHSNSNDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISSLPVSKYKCGFFLR 188

Query: 58  QHGSNDSCVICRVGW 72
           +   ++ CVIC++ +
Sbjct: 189 KKSRDERCVICQMEY 203


>Glyma13g27330.2 
          Length = 247

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 7/81 (8%)

Query: 2   DEHVNNSQDA---REDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGS-- 56
           + H +NS      ++++  D+++YE+LL LGE VG +S GL  + I   P+ KYK GS  
Sbjct: 128 NHHESNSSSQVIWQDNIYPDDMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFGSLF 187

Query: 57  DQHGSNDSCVICRVGWTMRTG 77
            +  S   CVIC++  T R G
Sbjct: 188 KRKNSGKRCVICQM--TYRRG 206


>Glyma13g27330.1 
          Length = 247

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 7/81 (8%)

Query: 2   DEHVNNSQDA---REDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGS-- 56
           + H +NS      ++++  D+++YE+LL LGE VG +S GL  + I   P+ KYK GS  
Sbjct: 128 NHHESNSSSQVIWQDNIYPDDMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFGSLF 187

Query: 57  DQHGSNDSCVICRVGWTMRTG 77
            +  S   CVIC++  T R G
Sbjct: 188 KRKNSGKRCVICQM--TYRRG 206


>Glyma13g20210.4 
          Length = 550

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 6/68 (8%)

Query: 1   MDEHVNNSQDAREDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGSDQHG 60
           +D+H    +D R  +D+D +SYE+LLALGE +G  S GL  D I+ + +      S+Q  
Sbjct: 439 LDQH----RDMR--MDIDNMSYEELLALGERIGHVSTGLSEDLISKYLTETIYCSSEQSQ 492

Query: 61  SNDSCVIC 68
             ++C IC
Sbjct: 493 EEETCAIC 500


>Glyma13g20210.3 
          Length = 550

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 6/68 (8%)

Query: 1   MDEHVNNSQDAREDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGSDQHG 60
           +D+H    +D R  +D+D +SYE+LLALGE +G  S GL  D I+ + +      S+Q  
Sbjct: 439 LDQH----RDMR--MDIDNMSYEELLALGERIGHVSTGLSEDLISKYLTETIYCSSEQSQ 492

Query: 61  SNDSCVIC 68
             ++C IC
Sbjct: 493 EEETCAIC 500


>Glyma13g20210.1 
          Length = 550

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 6/68 (8%)

Query: 1   MDEHVNNSQDAREDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGSDQHG 60
           +D+H    +D R  +D+D +SYE+LLALGE +G  S GL  D I+ + +      S+Q  
Sbjct: 439 LDQH----RDMR--MDIDNMSYEELLALGERIGHVSTGLSEDLISKYLTETIYCSSEQSQ 492

Query: 61  SNDSCVIC 68
             ++C IC
Sbjct: 493 EEETCAIC 500


>Glyma13g20210.2 
          Length = 540

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 6/68 (8%)

Query: 1   MDEHVNNSQDAREDVDLDELSYEQLLALGEVVGIESIGLPTDTIAYFPSVKYKTGSDQHG 60
           +D+H    +D R  +D+D +SYE+LLALGE +G  S GL  D I+ + +      S+Q  
Sbjct: 429 LDQH----RDMR--MDIDNMSYEELLALGERIGHVSTGLSEDLISKYLTETIYCSSEQSQ 482

Query: 61  SNDSCVIC 68
             ++C IC
Sbjct: 483 EEETCAIC 490