Miyakogusa Predicted Gene

Lj0g3v0312149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0312149.1 tr|I1JBA7|I1JBA7_SOYBN Protein translocase
subunit SecA OS=Glycine max GN=secA PE=3 SV=1,90,0,seg,NULL; SECA
INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM,NULL; P-loop
containing nucl,CUFF.21068.1
         (441 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g01060.1                                                       829   0.0  
Glyma10g27810.1                                                       827   0.0  
Glyma02g01060.2                                                       740   0.0  
Glyma02g01060.3                                                       739   0.0  
Glyma06g12320.1                                                       321   8e-88
Glyma09g25440.1                                                        82   1e-15
Glyma12g30380.1                                                        81   2e-15

>Glyma02g01060.1 
          Length = 987

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/460 (88%), Positives = 417/460 (90%), Gaps = 19/460 (4%)

Query: 1   MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES 60
           MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES
Sbjct: 362 MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES 421

Query: 61  IYKLKVTIVPTNKPMIRKDDSDVVFRATTGKWRAVVVEISRMHKTGRPVLVGTTSVEQSD 120
           IYKLKVTIVPTNKPMIRKD+SDVVFRAT+GKWRAVVVEISRMHKTGRPVLVGTTSVEQSD
Sbjct: 422 IYKLKVTIVPTNKPMIRKDESDVVFRATSGKWRAVVVEISRMHKTGRPVLVGTTSVEQSD 481

Query: 121 SLSEQLKEVGIPHEVLNAKPENVEREAEIVTQSGRLGAVTIATNMAGRGTDIILGGNAEF 180
           SLSEQLKE GIPHEVLNAKPENVEREAEIV QSGRLGAVTIATNMAGRGTDIILGGNAEF
Sbjct: 482 SLSEQLKEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDIILGGNAEF 541

Query: 181 MARLKLREILMPRVVKPAEGEFVSVKKPPPSKIWKVNEKLFPCQLSKINXXXXXXXXXXX 240
           MARLKLREILMPRVVKP+E  FVS+KKPPPSK WKVNEKLFPCQLS  N           
Sbjct: 542 MARLKLREILMPRVVKPSEEGFVSIKKPPPSKTWKVNEKLFPCQLSNKNVDMAEKAVQLA 601

Query: 241 XXTWGKRSLTELEAEERLSYSCEKGPAQDEVIAELRNAFLEISKEYKVFTEEERKKVVAA 300
             TWGKRSLTELEAEERLSY+CEKGPAQDEVIA+LRNAFLEI KEYKVFTEEERKKVV A
Sbjct: 602 VETWGKRSLTELEAEERLSYTCEKGPAQDEVIAKLRNAFLEIGKEYKVFTEEERKKVVEA 661

Query: 301 GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLMRAFR 360
           GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLMRAFR
Sbjct: 662 GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLMRAFR 721

Query: 361 VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLNSQ----------------- 403
           VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFE+DEVLNSQ                 
Sbjct: 722 VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEYDEVLNSQRDRVYTERRRALESDNL 781

Query: 404 --ILIEYAELTMDDILEANIGSDSTKDSWDLEKLIAKIQQ 441
             +LIEYAELTMDDILEANIGSD+ KDSWDLEKL AKIQQ
Sbjct: 782 QSLLIEYAELTMDDILEANIGSDAPKDSWDLEKLTAKIQQ 821


>Glyma10g27810.1 
          Length = 1003

 Score =  827 bits (2137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/460 (88%), Positives = 418/460 (90%), Gaps = 19/460 (4%)

Query: 1   MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES 60
           MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES
Sbjct: 379 MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES 438

Query: 61  IYKLKVTIVPTNKPMIRKDDSDVVFRATTGKWRAVVVEISRMHKTGRPVLVGTTSVEQSD 120
           IYKLKVTIVPTNKPMIRKD+SDVVFRAT+GKWRAVVVEISRMHKTGRPVLVGTTSVEQSD
Sbjct: 439 IYKLKVTIVPTNKPMIRKDESDVVFRATSGKWRAVVVEISRMHKTGRPVLVGTTSVEQSD 498

Query: 121 SLSEQLKEVGIPHEVLNAKPENVEREAEIVTQSGRLGAVTIATNMAGRGTDIILGGNAEF 180
           SLSEQLKE GIPHEVLNAKPENVEREAEIV QSGRLGAVTIATNMAGRGTDIILGGNAEF
Sbjct: 499 SLSEQLKEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDIILGGNAEF 558

Query: 181 MARLKLREILMPRVVKPAEGEFVSVKKPPPSKIWKVNEKLFPCQLSKINXXXXXXXXXXX 240
           MARLKLREILMPRVVKP+E  FVS+KKPPPSKIWKVNEKLFPCQLS  N           
Sbjct: 559 MARLKLREILMPRVVKPSEEGFVSIKKPPPSKIWKVNEKLFPCQLSNKNVDLAEKAVQLA 618

Query: 241 XXTWGKRSLTELEAEERLSYSCEKGPAQDEVIAELRNAFLEISKEYKVFTEEERKKVVAA 300
             TWGKRSLTELEAEERLSY+CEKGPAQDEVIA+LRNAFLEI KEYKVFTEEERKKVV A
Sbjct: 619 VETWGKRSLTELEAEERLSYTCEKGPAQDEVIAKLRNAFLEIGKEYKVFTEEERKKVVEA 678

Query: 301 GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLMRAFR 360
           GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLM+AFR
Sbjct: 679 GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLMQAFR 738

Query: 361 VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLNSQ----------------- 403
           VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFE+DEVLNSQ                 
Sbjct: 739 VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEYDEVLNSQRDRVYTERRRALESDNL 798

Query: 404 --ILIEYAELTMDDILEANIGSDSTKDSWDLEKLIAKIQQ 441
             +LIEYAELTMDDILEANIGSD+ KDSWDLEKL AKIQQ
Sbjct: 799 QSLLIEYAELTMDDILEANIGSDAPKDSWDLEKLTAKIQQ 838


>Glyma02g01060.2 
          Length = 953

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/460 (81%), Positives = 383/460 (83%), Gaps = 53/460 (11%)

Query: 1   MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES 60
           MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES
Sbjct: 362 MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES 421

Query: 61  IYKLKVTIVPTNKPMIRKDDSDVVFRATTGKWRAVVVEISRMHKTGRPVLVGTTSVEQSD 120
           IYKLKVTIVPTNKPMIRKD+SDVVFRAT+GKWRAVVVEISRMHKTGRPVLVGTTSVEQSD
Sbjct: 422 IYKLKVTIVPTNKPMIRKDESDVVFRATSGKWRAVVVEISRMHKTGRPVLVGTTSVEQSD 481

Query: 121 SLSEQLKEVGIPHEVLNAKPENVEREAEIVTQSGRLGAVTIATNMAGRGTDIILGGNAEF 180
           SLSEQLKE GIPHEVLNAKPENVEREAEIV QSGRLGAVTIATNMAGRGTDIILGGNAEF
Sbjct: 482 SLSEQLKEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDIILGGNAEF 541

Query: 181 MARLKLREILMPRVVKPAEGEFVSVKKPPPSKIWKVNEKLFPCQLSKINXXXXXXXXXXX 240
           MARLKLREILMPRVVKP+E  FVS+KKPPPSK WKVNEKLFPCQLS  N           
Sbjct: 542 MARLKLREILMPRVVKPSEEGFVSIKKPPPSKTWKVNEKLFPCQLSNKNVDMAEKAVQLA 601

Query: 241 XXTWGKRSLTELEAEERLSYSCEKGPAQDEVIAELRNAFLEISKEYKVFTEEERKKVVAA 300
             TWGKRSLTELEAEERLSY+CEKGPAQDEVIA+LRNAFLEI KEYKVFTEEERKKVV A
Sbjct: 602 VETWGKRSLTELEAEERLSYTCEKGPAQDEVIAKLRNAFLEIGKEYKVFTEEERKKVVEA 661

Query: 301 GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLMRAFR 360
           GGLHVVGTERHESRRIDN                                  QGLMRAFR
Sbjct: 662 GGLHVVGTERHESRRIDN----------------------------------QGLMRAFR 687

Query: 361 VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLNSQ----------------- 403
           VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFE+DEVLNSQ                 
Sbjct: 688 VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEYDEVLNSQRDRVYTERRRALESDNL 747

Query: 404 --ILIEYAELTMDDILEANIGSDSTKDSWDLEKLIAKIQQ 441
             +LIEYAELTMDDILEANIGSD+ KDSWDLEKL AKIQQ
Sbjct: 748 QSLLIEYAELTMDDILEANIGSDAPKDSWDLEKLTAKIQQ 787


>Glyma02g01060.3 
          Length = 842

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/460 (81%), Positives = 383/460 (83%), Gaps = 53/460 (11%)

Query: 1   MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES 60
           MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES
Sbjct: 362 MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES 421

Query: 61  IYKLKVTIVPTNKPMIRKDDSDVVFRATTGKWRAVVVEISRMHKTGRPVLVGTTSVEQSD 120
           IYKLKVTIVPTNKPMIRKD+SDVVFRAT+GKWRAVVVEISRMHKTGRPVLVGTTSVEQSD
Sbjct: 422 IYKLKVTIVPTNKPMIRKDESDVVFRATSGKWRAVVVEISRMHKTGRPVLVGTTSVEQSD 481

Query: 121 SLSEQLKEVGIPHEVLNAKPENVEREAEIVTQSGRLGAVTIATNMAGRGTDIILGGNAEF 180
           SLSEQLKE GIPHEVLNAKPENVEREAEIV QSGRLGAVTIATNMAGRGTDIILGGNAEF
Sbjct: 482 SLSEQLKEAGIPHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDIILGGNAEF 541

Query: 181 MARLKLREILMPRVVKPAEGEFVSVKKPPPSKIWKVNEKLFPCQLSKINXXXXXXXXXXX 240
           MARLKLREILMPRVVKP+E  FVS+KKPPPSK WKVNEKLFPCQLS  N           
Sbjct: 542 MARLKLREILMPRVVKPSEEGFVSIKKPPPSKTWKVNEKLFPCQLSNKNVDMAEKAVQLA 601

Query: 241 XXTWGKRSLTELEAEERLSYSCEKGPAQDEVIAELRNAFLEISKEYKVFTEEERKKVVAA 300
             TWGKRSLTELEAEERLSY+CEKGPAQDEVIA+LRNAFLEI KEYKVFTEEERKKVV A
Sbjct: 602 VETWGKRSLTELEAEERLSYTCEKGPAQDEVIAKLRNAFLEIGKEYKVFTEEERKKVVEA 661

Query: 301 GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLMRAFR 360
           GGLHVVGTERHESRRIDN                                  QGLMRAFR
Sbjct: 662 GGLHVVGTERHESRRIDN----------------------------------QGLMRAFR 687

Query: 361 VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLNSQ----------------- 403
           VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFE+DEVLNSQ                 
Sbjct: 688 VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEYDEVLNSQRDRVYTERRRALESDNL 747

Query: 404 --ILIEYAELTMDDILEANIGSDSTKDSWDLEKLIAKIQQ 441
             +LIEYAELTMDDILEANIGSD+ KDSWDLEKL AKIQQ
Sbjct: 748 QSLLIEYAELTMDDILEANIGSDAPKDSWDLEKLTAKIQQ 787


>Glyma06g12320.1 
          Length = 910

 Score =  321 bits (823), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 203/471 (43%), Positives = 266/471 (56%), Gaps = 42/471 (8%)

Query: 4   RRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFESIYK 63
           RRWS+G+HQAVEAKEGL IQ ++V +A I+YQ+ F  +PKL GMTGTA TE  EF  +++
Sbjct: 251 RRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQ 310

Query: 64  LKVTIVPTNKPMIRKDDSDVVFRATTGKWRAVVVEISRMHKTGRPVLVGTTSVEQSDSLS 123
           + V  VPTN P IRKD     F    GKW  V  E+  M + GRPVLVGTTSVE S+ LS
Sbjct: 311 MPVIEVPTNLPNIRKDLPIQAFATARGKWEQVRREVEYMFRQGRPVLVGTTSVENSELLS 370

Query: 124 EQLKEVGIPHEVLNAKPENVEREAEIVTQSGRLGAVTIATNMAGRGTDIILGGNAEFMAR 183
             L+E  IPH VLNA+P+   +EAEIV Q+GR  A+T++TNMAGRGTDIILGGN + +AR
Sbjct: 371 GLLREWNIPHNVLNARPKYAAKEAEIVAQAGRKHAITLSTNMAGRGTDIILGGNPKMLAR 430

Query: 184 LKLREILMPRVVK-----PAEGEFVSVKKPPPSKIWKVNEKLFPCQLSKINXXXXXXXXX 238
             + + L+  + +         E +S K  P  K+   +  L    L+K           
Sbjct: 431 EIIEDSLLSFLTREDPNVELADEAISQKVLPKVKVGSSSMAL----LAKTTLMAKYVSKS 486

Query: 239 XXXX-TWGKRSLTELEA-EERLSYS---CEKGPAQDEVIAELRN----AFLEISKEYKVF 289
                T+ K     LEA E  LSYS    EK   ++  I  L      A+L + K+ +  
Sbjct: 487 EGKSWTYQKAKSFILEAVEMSLSYSLEGLEKLANEESEIYPLGPTVALAYLSVLKDCEEH 546

Query: 290 TEEERKKVVAAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGG 349
              E  +V   GGLHV+GT  HESRRIDNQLRGR+GRQGDPGS+RF +SL+D +F+ F  
Sbjct: 547 CLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFNF 606

Query: 350 DR---IQGLMRAFRVEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLN----- 401
           D    ++ + +    EDLPIE   + K L   Q   E +FF IRK L EFDEVL      
Sbjct: 607 DTEWAVRLISKITNDEDLPIEGDAIVKQLLALQINAEKFFFGIRKNLVEFDEVLEVQRKH 666

Query: 402 ----------------SQILIEYAELTMDDILEANIGSDSTKDSWDLEKLI 436
                           SQ + +Y +  +D+I+ +NI       SW L KL+
Sbjct: 667 VYDLRQLILTGDDESCSQHIFQYMQAVVDEIVFSNIDPLKHPRSWGLSKLL 717


>Glyma09g25440.1 
          Length = 194

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 3/86 (3%)

Query: 95  VVVEISRMHKTGRPVLVGT---TSVEQSDSLSEQLKEVGIPHEVLNAKPENVEREAEIVT 151
           +V  I  +H   R ++  +    SV+ S+ LS  L+E  IPH VLNA+P+   +EAEIV 
Sbjct: 80  LVRAIYILHILCRMIIFHSFSICSVQNSELLSSLLREWNIPHNVLNARPKYASKEAEIVA 139

Query: 152 QSGRLGAVTIATNMAGRGTDIILGGN 177
           Q GR  A+T++TNMAG GT+IILGGN
Sbjct: 140 QPGRKHALTLSTNMAGWGTNIILGGN 165


>Glyma12g30380.1 
          Length = 122

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 1/63 (1%)

Query: 115 SVEQSDSLSEQLKEVGIPHEVLNAKPENVEREAEIVTQSGRLGAVTIATNMAGRGTDIIL 174
           SVE S+ LS  L+E  IPH VLNA+P+ V +EAEIV Q+GR  A+T++ NMAGRGTDIIL
Sbjct: 11  SVENSEFLSGLLREWNIPHNVLNARPK-VSKEAEIVAQAGRKHAITLSANMAGRGTDIIL 69

Query: 175 GGN 177
           GGN
Sbjct: 70  GGN 72