Miyakogusa Predicted Gene

Lj0g3v0311969.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311969.1 Non Chatacterized Hit- tr|C6T4T9|C6T4T9_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,44.09,0.000002,seg,NULL,CUFF.21049.1
         (92 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g00970.1                                                        52   2e-07

>Glyma12g00970.1 
          Length = 85

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 46/93 (49%), Gaps = 20/93 (21%)

Query: 3  SKRCSLIWVVLFLC-VLCFSAKATARNINAAGASELYPASNDEIGVSSRRLLWQXXXXXX 61
          S R S+ WVVLF+C +LCFSAKA A    A  A E  P         SRRLL +      
Sbjct: 10 SSRWSVTWVVLFICLLLCFSAKAIATRNLAGYADEKGP---------SRRLLGR------ 54

Query: 62 XXXXCSRGRIAYAV--SPVKSHAENDPRCHNYL 92
              C RGR+   V     K   E+ PRC+NYL
Sbjct: 55 --SPCKRGRMTSEVVQGDRKQQREDSPRCNNYL 85