Miyakogusa Predicted Gene

Lj0g3v0311659.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311659.1 Non Chatacterized Hit- tr|I1N4P9|I1N4P9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58416
PE,50,7e-19,B12D,NADH-ubiquinone reductase complex 1 MLRQ
subunit,NODE_69686_length_624_cov_152.589737.path1.1
         (88 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g01340.2                                                       161   2e-40
Glyma11g37370.1                                                       160   4e-40
Glyma18g01340.1                                                       140   3e-34
Glyma04g34840.1                                                       135   1e-32
Glyma06g19850.1                                                       122   6e-29
Glyma08g27620.1                                                       100   4e-22
Glyma18g50800.1                                                        98   2e-21

>Glyma18g01340.2 
          Length = 89

 Score =  161 bits (407), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 72/88 (81%), Positives = 82/88 (93%)

Query: 1  MAANRWIRPEVFPLFATVGIAVGICGMQLVRNISTNPEVRVTKQNRAAGILDNFEEGEKY 60
          MAANRW++PEV+PLFA VG+AVGICGMQLVRNI+TNPEVRVTKQNRAAGIL+NF EGEKY
Sbjct: 1  MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRVTKQNRAAGILENFAEGEKY 60

Query: 61 SQHFVRKFVRGKDTQIMPSINKFFSDPN 88
          SQH +RK+VRGK  QIMPS+N FFSDP+
Sbjct: 61 SQHSLRKYVRGKQPQIMPSVNNFFSDPS 88


>Glyma11g37370.1 
          Length = 89

 Score =  160 bits (404), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 82/88 (93%)

Query: 1  MAANRWIRPEVFPLFATVGIAVGICGMQLVRNISTNPEVRVTKQNRAAGILDNFEEGEKY 60
          MAANRW++PEV+PLFA+VG+AVGICGMQLVRNI+TNPEVRVTKQNR AGIL+NF EGEKY
Sbjct: 1  MAANRWLKPEVYPLFASVGVAVGICGMQLVRNITTNPEVRVTKQNRTAGILENFAEGEKY 60

Query: 61 SQHFVRKFVRGKDTQIMPSINKFFSDPN 88
          SQH +RK+VRGK  QIMPS+N FFSDP+
Sbjct: 61 SQHSLRKYVRGKQPQIMPSVNNFFSDPS 88


>Glyma18g01340.1 
          Length = 90

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 65/89 (73%), Positives = 78/89 (87%), Gaps = 1/89 (1%)

Query: 1  MAANRWIRPEVFPLFATVGIAVGICGMQLVRNISTNPEVR-VTKQNRAAGILDNFEEGEK 59
          MAANRW++PEV+PLFA VG+AVGICGMQLVRNI+TNPEVR +   + +AGIL+NF EGEK
Sbjct: 1  MAANRWLKPEVYPLFAAVGVAVGICGMQLVRNITTNPEVRYIWIFHISAGILENFAEGEK 60

Query: 60 YSQHFVRKFVRGKDTQIMPSINKFFSDPN 88
          YSQH +RK+VRGK  QIMPS+N FFSDP+
Sbjct: 61 YSQHSLRKYVRGKQPQIMPSVNNFFSDPS 89


>Glyma04g34840.1 
          Length = 89

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 71/84 (84%)

Query: 3  ANRWIRPEVFPLFATVGIAVGICGMQLVRNISTNPEVRVTKQNRAAGILDNFEEGEKYSQ 62
          ANRW+RPEV+PLFA VG AVGICG QLVRNI  NPEVRV K+ R AG+L+NF EGEKY++
Sbjct: 2  ANRWLRPEVYPLFAAVGAAVGICGFQLVRNICINPEVRVNKEGRKAGVLENFAEGEKYAE 61

Query: 63 HFVRKFVRGKDTQIMPSINKFFSD 86
          HF+RK+VR +  +IMPSIN FF+D
Sbjct: 62 HFLRKYVRNRTPEIMPSINSFFAD 85


>Glyma06g19850.1 
          Length = 84

 Score =  122 bits (307), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 55/86 (63%), Positives = 68/86 (79%), Gaps = 5/86 (5%)

Query: 3  ANRWIRPEVFPLFATVGIAVGICGMQLVRNISTNPEVRVTKQNRAAGILDNFEEGEKYSQ 62
          AN W+RPEV+PLFA VG AVGICG QLVRNI  NPE     + R AG+L+NF EGEKY++
Sbjct: 2  ANHWLRPEVYPLFAAVGAAVGICGFQLVRNICINPE-----EGRKAGVLENFAEGEKYAE 56

Query: 63 HFVRKFVRGKDTQIMPSINKFFSDPN 88
          HF+RK+VR +  +IMPSIN FF+DP+
Sbjct: 57 HFLRKYVRNRTPEIMPSINSFFADPS 82


>Glyma08g27620.1 
          Length = 86

 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 60/82 (73%)

Query: 5  RWIRPEVFPLFATVGIAVGICGMQLVRNISTNPEVRVTKQNRAAGILDNFEEGEKYSQHF 64
          RW++PEV+PL A +    G+C  QL RN+  NP+VR+ K  R+  +L+N EEGEKY++H 
Sbjct: 3  RWMKPEVYPLLAAMTFVTGMCVFQLTRNVLGNPDVRINKTRRSMAVLENREEGEKYAEHG 62

Query: 65 VRKFVRGKDTQIMPSINKFFSD 86
          +RKF+R +  +IMP+IN FFS+
Sbjct: 63 LRKFLRTRPPEIMPTINHFFSE 84


>Glyma18g50800.1 
          Length = 86

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 59/82 (71%)

Query: 5  RWIRPEVFPLFATVGIAVGICGMQLVRNISTNPEVRVTKQNRAAGILDNFEEGEKYSQHF 64
          RW++PEV+PL A +     +C  QL RN+  NP+VR+ K  R+  +LDN EEGEKY++H 
Sbjct: 3  RWMKPEVYPLLAAMTFVSSMCVFQLTRNMLGNPDVRINKTRRSMPVLDNREEGEKYAEHG 62

Query: 65 VRKFVRGKDTQIMPSINKFFSD 86
          +RKF+R +  +IMP+IN FFS+
Sbjct: 63 LRKFLRTRPPEIMPTINHFFSE 84