Miyakogusa Predicted Gene

Lj0g3v0311329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311329.1 Non Chatacterized Hit- tr|F6HVK5|F6HVK5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,83.1,3e-19,no
description,Pre-ATP-grasp fold; PHOSPHORIBOSYLAMINOIMIDAZOLE
CARBOXYLASE ATPASE-SUBUNIT,NULL; Pre,gene.g24274.t1.1
         (117 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g36930.1                                                       110   2e-25
Glyma10g30620.1                                                        94   3e-20

>Glyma20g36930.1 
          Length = 602

 Score =  110 bits (276), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 56/72 (77%)

Query: 45  NDEVPVHGLSEAXXXXXXXXXXXRMLCQAASKMAIKVMVLDPQENCPASSLSYQHRVGSF 104
           N+E PVHGLSE            RM+CQAAS+MAIKVMVLDPQENCPASSLSY H VGSF
Sbjct: 37  NNESPVHGLSEVVVGVLGGGQLGRMMCQAASQMAIKVMVLDPQENCPASSLSYHHMVGSF 96

Query: 105 DDSATVEEFAKR 116
           DDS TVEEFAKR
Sbjct: 97  DDSTTVEEFAKR 108


>Glyma10g30620.1 
          Length = 542

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/48 (89%), Positives = 45/48 (93%)

Query: 69  MLCQAASKMAIKVMVLDPQENCPASSLSYQHRVGSFDDSATVEEFAKR 116
           M+CQAAS+MAIKVMVLDPQENCPASSLSY H VGSFDDS TVEEFAKR
Sbjct: 1   MICQAASQMAIKVMVLDPQENCPASSLSYDHMVGSFDDSTTVEEFAKR 48