Miyakogusa Predicted Gene

Lj0g3v0311209.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311209.1 Non Chatacterized Hit- tr|C5WXV1|C5WXV1_SORBI
Putative uncharacterized protein Sb01g046810
OS=Sorghu,58.43,1e-18,E2F-DP heterodimerization region,NULL;
DP,Transcription factor DP, C-terminal,CUFF.21000.1
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g02050.3                                                       134   2e-32
Glyma11g09750.2                                                       130   3e-31
Glyma11g09750.3                                                       130   3e-31
Glyma12g02050.1                                                       122   1e-28
Glyma12g02050.2                                                       122   1e-28
Glyma11g09750.1                                                       118   1e-27
Glyma11g01270.1                                                       114   2e-26
Glyma01g43800.1                                                       109   6e-25

>Glyma12g02050.3 
          Length = 316

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/87 (78%), Positives = 73/87 (83%), Gaps = 2/87 (2%)

Query: 1   MQLVHFDFNSTPFELHDDNYVLKAMKFHERPENDNITHNPTDGGEGSSMSGLYHAQVPTL 60
           MQLVHFDFNSTPFELHDDNYVLKAMKF ERP  DN+THN TDGGEGSSMSGL   Q PT+
Sbjct: 232 MQLVHFDFNSTPFELHDDNYVLKAMKFGERPLEDNMTHNLTDGGEGSSMSGLCQPQAPTI 291

Query: 61  VSNPAVRPPPSSPQLPGILKARVKNEH 87
           + N + R PP+SP LPGILKARVK EH
Sbjct: 292 L-NVSNR-PPTSPPLPGILKARVKQEH 316


>Glyma11g09750.2 
          Length = 319

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/87 (77%), Positives = 73/87 (83%), Gaps = 2/87 (2%)

Query: 1   MQLVHFDFNSTPFELHDDNYVLKAMKFHERPENDNITHNPTDGGEGSSMSGLYHAQVPTL 60
           MQLVHFDFNSTPFELHDDNYVLKAMKF ERP++DN+THN TDGGE SSMSGL   Q PT 
Sbjct: 235 MQLVHFDFNSTPFELHDDNYVLKAMKFGERPQDDNMTHNLTDGGEVSSMSGLCQPQTPTN 294

Query: 61  VSNPAVRPPPSSPQLPGILKARVKNEH 87
           + N + R PP+SP LPGILKARVK EH
Sbjct: 295 L-NVSNR-PPTSPPLPGILKARVKQEH 319


>Glyma11g09750.3 
          Length = 318

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/87 (77%), Positives = 73/87 (83%), Gaps = 2/87 (2%)

Query: 1   MQLVHFDFNSTPFELHDDNYVLKAMKFHERPENDNITHNPTDGGEGSSMSGLYHAQVPTL 60
           MQLVHFDFNSTPFELHDDNYVLKAMKF ERP++DN+THN TDGGE SSMSGL   Q PT 
Sbjct: 234 MQLVHFDFNSTPFELHDDNYVLKAMKFGERPQDDNMTHNLTDGGEVSSMSGLCQPQTPTN 293

Query: 61  VSNPAVRPPPSSPQLPGILKARVKNEH 87
           + N + R PP+SP LPGILKARVK EH
Sbjct: 294 L-NVSNR-PPTSPPLPGILKARVKQEH 318


>Glyma12g02050.1 
          Length = 333

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/80 (77%), Positives = 67/80 (83%), Gaps = 2/80 (2%)

Query: 1   MQLVHFDFNSTPFELHDDNYVLKAMKFHERPENDNITHNPTDGGEGSSMSGLYHAQVPTL 60
           MQLVHFDFNSTPFELHDDNYVLKAMKF ERP  DN+THN TDGGEGSSMSGL   Q PT+
Sbjct: 233 MQLVHFDFNSTPFELHDDNYVLKAMKFGERPLEDNMTHNLTDGGEGSSMSGLCQPQAPTI 292

Query: 61  VSNPAVRPPPSSPQLPGILK 80
           + N + R PP+SP LPGILK
Sbjct: 293 L-NVSNR-PPTSPPLPGILK 310


>Glyma12g02050.2 
          Length = 332

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/80 (77%), Positives = 67/80 (83%), Gaps = 2/80 (2%)

Query: 1   MQLVHFDFNSTPFELHDDNYVLKAMKFHERPENDNITHNPTDGGEGSSMSGLYHAQVPTL 60
           MQLVHFDFNSTPFELHDDNYVLKAMKF ERP  DN+THN TDGGEGSSMSGL   Q PT+
Sbjct: 232 MQLVHFDFNSTPFELHDDNYVLKAMKFGERPLEDNMTHNLTDGGEGSSMSGLCQPQAPTI 291

Query: 61  VSNPAVRPPPSSPQLPGILK 80
           + N + R PP+SP LPGILK
Sbjct: 292 L-NVSNR-PPTSPPLPGILK 309


>Glyma11g09750.1 
          Length = 335

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/80 (76%), Positives = 67/80 (83%), Gaps = 2/80 (2%)

Query: 1   MQLVHFDFNSTPFELHDDNYVLKAMKFHERPENDNITHNPTDGGEGSSMSGLYHAQVPTL 60
           MQLVHFDFNSTPFELHDDNYVLKAMKF ERP++DN+THN TDGGE SSMSGL   Q PT 
Sbjct: 235 MQLVHFDFNSTPFELHDDNYVLKAMKFGERPQDDNMTHNLTDGGEVSSMSGLCQPQTPTN 294

Query: 61  VSNPAVRPPPSSPQLPGILK 80
           + N + R PP+SP LPGILK
Sbjct: 295 L-NVSNR-PPTSPPLPGILK 312


>Glyma11g01270.1 
          Length = 337

 Score =  114 bits (285), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/87 (79%), Positives = 72/87 (82%), Gaps = 5/87 (5%)

Query: 1   MQLVHFDFNSTPFELHDDNYVLKAMKFHERPENDNITHNPTDGGEGSSMSGLYHAQVPTL 60
           MQLVHFDFNSTPFELHDDNYVLKAMKF ER +NDN T N TDGGEGSS+    +AQVPT 
Sbjct: 256 MQLVHFDFNSTPFELHDDNYVLKAMKFCERSQNDNTTDNSTDGGEGSSI----YAQVPTS 311

Query: 61  VSNPAVRPPPSSPQLPGILKARVKNEH 87
           VSNP    PPSSP LPGILKARVKNEH
Sbjct: 312 VSNPPN-RPPSSPPLPGILKARVKNEH 337


>Glyma01g43800.1 
          Length = 338

 Score =  109 bits (273), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 68/87 (78%), Positives = 70/87 (80%), Gaps = 5/87 (5%)

Query: 1   MQLVHFDFNSTPFELHDDNYVLKAMKFHERPENDNITHNPTDGGEGSSMSGLYHAQVPTL 60
           MQLVHFDFNSTPFELHDDNYVLKAMK  E   NDN T NPTDGGEGSS+    +AQVPT 
Sbjct: 257 MQLVHFDFNSTPFELHDDNYVLKAMKLCEGSHNDNTTDNPTDGGEGSSI----YAQVPTS 312

Query: 61  VSNPAVRPPPSSPQLPGILKARVKNEH 87
           VSNP    PPSSP LPGILKARVKNEH
Sbjct: 313 VSNPPN-RPPSSPPLPGILKARVKNEH 338